RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 C1orf64Q8NEQ6 169 aa7.04□□□□□ -1.28
HERC1-207ENST00000560316 HCG22E2RYF7 251 aa7.03□□□□□ -1.28
HERC1-207ENST00000560316 PDE6GP18545 87 aa7.03□□□□□ -1.28
HERC1-207ENST00000560316 CRIPTQ9P021 101 aa7.02□□□□□ -1.29
HERC1-207ENST00000560316 MT1XP80297 61 aa6.98□□□□□ -1.29
HERC1-207ENST00000560316 ATXN8Q156A1 80 aa6.97□□□□□ -1.29
HERC1-207ENST00000560316 CASC2Q6XLA1 102 aa6.97□□□□□ -1.29
HERC1-207ENST00000560316 PRO2289Q9P1D8 64 aa6.97□□□□□ -1.29
HERC1-207ENST00000560316 GPR98Q8WXG9 6306 aa6.96□□□□□ -1.29
HERC1-207ENST00000560316 CXCL6P80162 114 aa6.95□□□□□ -1.3
HERC1-207ENST00000560316 Q8N9L7 120 aa6.94□□□□□ -1.3
HERC1-207ENST00000560316 BPY2O14599 106 aa6.93□□□□□ -1.3
HERC1-207ENST00000560316 NAA38Q9BRA0 125 aaKnown RBP6.88□□□□□ -1.31
HERC1-207ENST00000560316 KRTAP12-2P59991 146 aa6.87□□□□□ -1.31
HERC1-207ENST00000560316 A0A087WVE0 104 aa6.86□□□□□ -1.31
HERC1-207ENST00000560316 UQCR10Q9UDW1 63 aa6.83□□□□□ -1.32
HERC1-207ENST00000560316 PYY3Q5JQD4 70 aa6.8□□□□□ -1.32
HERC1-207ENST00000560316 A8MUN3 132 aa6.79□□□□□ -1.32
HERC1-207ENST00000560316 PLAC4Q8WY50 150 aa6.79□□□□□ -1.32
HERC1-207ENST00000560316 H3BS24 57 aa6.76□□□□□ -1.33
HERC1-207ENST00000560316 H0YAA0 97 aa6.73□□□□□ -1.33
HERC1-207ENST00000560316 ADM2Q7Z4H4 148 aa6.7□□□□□ -1.34
HERC1-207ENST00000560316 DSTQ03001 7570 aaKnown RBP6.7□□□□□ -1.34
HERC1-207ENST00000560316 KRTAP10-7P60409 375 aaPredicted RBP6.66□□□□□ -1.34
HERC1-207ENST00000560316 NDUFC1O43677 76 aa6.65□□□□□ -1.34
HERC1-207ENST00000560316 CYP4F30PQ9H0H9 118 aa6.65□□□□□ -1.34
HERC1-207ENST00000560316 TP53AIP1Q9HCN2 124 aa6.63□□□□□ -1.35
HERC1-207ENST00000560316 TSTD3H0UI37 97 aa6.62□□□□□ -1.35
HERC1-207ENST00000560316 H3BT86 120 aa6.62□□□□□ -1.35
HERC1-207ENST00000560316 K7EP34 96 aa6.61□□□□□ -1.35
HERC1-207ENST00000560316 M0R143 59 aa6.61□□□□□ -1.35
HERC1-207ENST00000560316 KRTAP10-12P60413 245 aa6.59□□□□□ -1.35
HERC1-207ENST00000560316 R4GN34 69 aa6.56□□□□□ -1.36
HERC1-207ENST00000560316 UBL5Q9BZL1 73 aa6.53□□□□□ -1.36
HERC1-207ENST00000560316 M0QZ58 72 aa6.49□□□□□ -1.37
HERC1-207ENST00000560316 LOC101927531A0A1B0GV80 90 aa6.48□□□□□ -1.37
HERC1-207ENST00000560316 P0C880 135 aa6.48□□□□□ -1.37
HERC1-207ENST00000560316 LINC01554Q52M75 96 aa6.46□□□□□ -1.38
HERC1-207ENST00000560316 TRAV22A0A0B4J277 110 aa6.45□□□□□ -1.38
HERC1-207ENST00000560316 ACYP1P07311 99 aa6.42□□□□□ -1.38
HERC1-207ENST00000560316 BATFQ16520 125 aa6.42□□□□□ -1.38
HERC1-207ENST00000560316 A0A1W2PPM0 123 aa6.4□□□□□ -1.38
HERC1-207ENST00000560316 C9orf118A6NHY6 69 aa6.4□□□□□ -1.38
HERC1-207ENST00000560316 C20orf197Q8N268 126 aa6.38□□□□□ -1.39
HERC1-207ENST00000560316 SPCS1Q9Y6A9 102 aa6.38□□□□□ -1.39
HERC1-207ENST00000560316 HMCN1Q96RW7 5635 aa6.34□□□□□ -1.39
HERC1-207ENST00000560316 TAX1BP3O14907 124 aa6.33□□□□□ -1.4
HERC1-207ENST00000560316 TMA7Q9Y2S6 64 aaKnown RBP6.31□□□□□ -1.4
HERC1-207ENST00000560316 MT4P47944 62 aa6.29□□□□□ -1.4
HERC1-207ENST00000560316 AHNAK2Q8IVF2 5795 aa6.29□□□□□ -1.4
HERC1-207ENST00000560316 H0Y9P7 68 aa6.28□□□□□ -1.4
HERC1-207ENST00000560316 KRTAP19-3Q7Z4W3 81 aa6.27□□□□□ -1.41
HERC1-207ENST00000560316 KRTAP5-10Q6L8G5 202 aa6.25□□□□□ -1.41
HERC1-207ENST00000560316 ATOX1O00244 68 aa6.24□□□□□ -1.41
HERC1-207ENST00000560316 KRTAP19-7Q3SYF9 63 aa6.24□□□□□ -1.41
HERC1-207ENST00000560316 UQCRQO14949 82 aa6.23□□□□□ -1.41
HERC1-207ENST00000560316 MT1EP04732 61 aa6.21□□□□□ -1.42
HERC1-207ENST00000560316 PRO0461Q9UI25 63 aa6.21□□□□□ -1.42
HERC1-207ENST00000560316 CYSTM1Q9H1C7 97 aa6.18□□□□□ -1.42
HERC1-207ENST00000560316 MT-ATP8P03928 68 aa6.17□□□□□ -1.42
HERC1-207ENST00000560316 LINC00208Q96KT6 92 aa6.13□□□□□ -1.43
HERC1-207ENST00000560316 SMIM6P0DI80 62 aa6.08□□□□□ -1.44
HERC1-207ENST00000560316 KRTAP5-7Q6L8G8 165 aa6.07□□□□□ -1.44
HERC1-207ENST00000560316 HIST1H4AP62805 103 aaKnown RBP6.05□□□□□ -1.44
HERC1-207ENST00000560316 MT1GP13640 62 aa6.04□□□□□ -1.44
HERC1-207ENST00000560316 DMAC1Q96GE9 116 aa6.01□□□□□ -1.45
HERC1-207ENST00000560316 KRTAP5-4Q6L8H1 288 aa6□□□□□ -1.45
HERC1-207ENST00000560316 ETDBQ3ZM63 59 aa5.98□□□□□ -1.45
HERC1-207ENST00000560316 PP632Q6XCG6 107 aa5.98□□□□□ -1.45
HERC1-207ENST00000560316 MP68P56378 58 aa5.97□□□□□ -1.45
HERC1-207ENST00000560316 MT1MQ8N339 61 aa5.96□□□□□ -1.46
HERC1-207ENST00000560316 KRTAP19-5Q3LI72 72 aa5.95□□□□□ -1.46
HERC1-207ENST00000560316 CAMK2N1Q7Z7J9 78 aa5.94□□□□□ -1.46
HERC1-207ENST00000560316 ATP5EP2Q5VTU8 51 aa5.93□□□□□ -1.46
HERC1-207ENST00000560316 KRTAP4-3Q9BYR4 195 aa5.89□□□□□ -1.47
HERC1-207ENST00000560316 OCR1Q9BZK8 76 aa5.89□□□□□ -1.47
HERC1-207ENST00000560316 SPRR5A0A1B0GTR4 108 aa5.88□□□□□ -1.47
HERC1-207ENST00000560316 F8W1H4 67 aa5.88□□□□□ -1.47
HERC1-207ENST00000560316 COL5A1-AS1Q5SY13 56 aa5.87□□□□□ -1.47
HERC1-207ENST00000560316 A0A0D9SG42 100 aa5.85□□□□□ -1.47
HERC1-207ENST00000560316 TRAV7A0A075B6U4 112 aa5.84□□□□□ -1.47
HERC1-207ENST00000560316 MT1LQ93083 61 aa5.84□□□□□ -1.47
HERC1-207ENST00000560316 GTF2H5Q6ZYL4 71 aa5.83□□□□□ -1.48
HERC1-207ENST00000560316 KRTAP13-4Q3LI77 160 aa5.82□□□□□ -1.48
HERC1-207ENST00000560316 H3BPC8 53 aa5.78□□□□□ -1.48
HERC1-207ENST00000560316 SPTSSBQ8NFR3 76 aa5.77□□□□□ -1.49
HERC1-207ENST00000560316 FAM240AA0A1B0GVK7 77 aa5.76□□□□□ -1.49
HERC1-207ENST00000560316 ACYP2P14621 99 aa5.74□□□□□ -1.49
HERC1-207ENST00000560316 KRTAP20-2Q3LI61 65 aa5.72□□□□□ -1.49
HERC1-207ENST00000560316 LINC00643Q86TS7 51 aa5.68□□□□□ -1.5
HERC1-207ENST00000560316 KRTAP15-1Q3LI76 137 aa5.66□□□□□ -1.5
HERC1-207ENST00000560316 CHKB-CPT1BH3BT56 60 aa5.64□□□□□ -1.51
HERC1-207ENST00000560316 LOC105371267A0A1B0GV96 52 aa5.6□□□□□ -1.51
HERC1-207ENST00000560316 C10orf95Q9H7T3 257 aa5.57□□□□□ -1.52
HERC1-207ENST00000560316 SCGB1A1P11684 91 aa5.53□□□□□ -1.52
HERC1-207ENST00000560316 SPINT4Q6UDR6 99 aa5.53□□□□□ -1.52
HERC1-207ENST00000560316 LCE3AQ5TA76 89 aa5.52□□□□□ -1.53
HERC1-207ENST00000560316 KRTAP5-5Q701N2 237 aaPredicted RBP5.51□□□□□ -1.53
HERC1-207ENST00000560316 KRTAP12-4P60329 112 aa5.5□□□□□ -1.53
HERC1-207ENST00000560316 SPATA8Q6RVD6 105 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms