RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 KRTAP10-8P60410 259 aa1.15□□□□□ -2.23
RGPD1-204ENST00000559485 FASNP49327 2511 aaKnown RBP1.15□□□□□ -2.23
RGPD1-204ENST00000559485 MYO9AB2RTY4 2548 aa1.15□□□□□ -2.23
RGPD1-204ENST00000559485 FBN2P35556 2912 aa1.14□□□□□ -2.23
RGPD1-204ENST00000559485 ITPR1Q14643 2758 aa1.14□□□□□ -2.23
RGPD1-204ENST00000559485 SETXQ7Z333 2677 aaKnown RBP1.14□□□□□ -2.23
RGPD1-204ENST00000559485 ABCA12Q86UK0 2595 aa1.14□□□□□ -2.23
RGPD1-204ENST00000559485 FAT2Q9NYQ8 4349 aa1.14□□□□□ -2.23
RGPD1-204ENST00000559485 UTP20O75691 2785 aaKnown RBP1.13□□□□□ -2.23
RGPD1-204ENST00000559485 SACSQ9NZJ4 4579 aa1.13□□□□□ -2.23
RGPD1-204ENST00000559485 PKHD1P08F94 4074 aa1.13□□□□□ -2.23
RGPD1-204ENST00000559485 KRTAP2-2Q9BYT5 123 aa1.13□□□□□ -2.23
RGPD1-204ENST00000559485 RYR3Q15413 4870 aa1.12□□□□□ -2.23
RGPD1-204ENST00000559485 TEX15Q9BXT5 2789 aa1.12□□□□□ -2.23
RGPD1-204ENST00000559485 FBN3Q75N90 2809 aa1.12□□□□□ -2.23
RGPD1-204ENST00000559485 MEGF8Q7Z7M0 2845 aa1.12□□□□□ -2.23
RGPD1-204ENST00000559485 APCP25054 2843 aa1.12□□□□□ -2.23
RGPD1-204ENST00000559485 KRTAP9-7A8MTY7 169 aa1.12□□□□□ -2.23
RGPD1-204ENST00000559485 MXRA5Q9NR99 2828 aa1.12□□□□□ -2.23
RGPD1-204ENST00000559485 FLG2Q5D862 2391 aaPredicted RBP1.11□□□□□ -2.23
RGPD1-204ENST00000559485 TENM4Q6N022 2769 aa1.11□□□□□ -2.23
RGPD1-204ENST00000559485 DNAH11Q96DT5 4516 aa1.11□□□□□ -2.23
RGPD1-204ENST00000559485 EPG5Q9HCE0 2579 aa1.11□□□□□ -2.23
RGPD1-204ENST00000559485 UNC79Q9P2D8 2635 aa1.11□□□□□ -2.23
RGPD1-204ENST00000559485 PKD1L1Q8TDX9 2849 aa1.1□□□□□ -2.23
RGPD1-204ENST00000559485 KMT2CQ8NEZ4 4911 aaKnown RBP1.1□□□□□ -2.23
RGPD1-204ENST00000559485 KRTAP9-3Q9BYQ3 159 aa1.1□□□□□ -2.23
RGPD1-204ENST00000559485 MYCBP2O75592 4640 aa1.1□□□□□ -2.23
RGPD1-204ENST00000559485 HERC1Q15751 4861 aa1.1□□□□□ -2.23
RGPD1-204ENST00000559485 JMJD1CQ15652 2540 aa1.1□□□□□ -2.23
RGPD1-204ENST00000559485 TEP1Q99973 2627 aaKnown RBP1.1□□□□□ -2.23
RGPD1-204ENST00000559485 SPRR5A0A1B0GTR4 108 aa1.09□□□□□ -2.23
RGPD1-204ENST00000559485 GCN1Q92616 2671 aaKnown RBP1.09□□□□□ -2.23
RGPD1-204ENST00000559485 SETD2Q9BYW2 2564 aaPredicted RBP1.09□□□□□ -2.23
RGPD1-204ENST00000559485 HELZ2Q9BYK8 2649 aaKnown RBP1.09□□□□□ -2.24
RGPD1-204ENST00000559485 SRRM2Q9UQ35 2752 aaKnown RBP1.09□□□□□ -2.24
RGPD1-204ENST00000559485 MTORP42345 2549 aa1.09□□□□□ -2.24
RGPD1-204ENST00000559485 CFAP46Q8IYW2 2715 aa1.08□□□□□ -2.24
RGPD1-204ENST00000559485 KRTAP10-4P60372 401 aaPredicted RBP1.08□□□□□ -2.24
RGPD1-204ENST00000559485 M0R2T5 61 aa1.08□□□□□ -2.24
RGPD1-204ENST00000559485 LCE1AQ5T7P2 110 aa1.08□□□□□ -2.24
RGPD1-204ENST00000559485 HECTD1Q9ULT8 2610 aa1.08□□□□□ -2.24
RGPD1-204ENST00000559485 DYNC1H1Q14204 4646 aaKnown RBP1.07□□□□□ -2.24
RGPD1-204ENST00000559485 ITPR2Q14571 2701 aa1.07□□□□□ -2.24
RGPD1-204ENST00000559485 VPS13BQ7Z7G8 4022 aa1.07□□□□□ -2.24
RGPD1-204ENST00000559485 MAST4O15021 2626 aa1.06□□□□□ -2.24
RGPD1-204ENST00000559485 ATRQ13535 2644 aa1.06□□□□□ -2.24
RGPD1-204ENST00000559485 HYDINQ4G0P3 5121 aa1.06□□□□□ -2.24
RGPD1-204ENST00000559485 HIVEP1P15822 2718 aa1.06□□□□□ -2.24
RGPD1-204ENST00000559485 FLNCQ14315 2725 aa1.06□□□□□ -2.24
RGPD1-204ENST00000559485 PLECQ15149 4684 aaKnown RBP1.06□□□□□ -2.24
RGPD1-204ENST00000559485 NSD1Q96L73 2696 aaPredicted RBP1.06□□□□□ -2.24
RGPD1-204ENST00000559485 BAHCC1Q9P281 2608 aa1.06□□□□□ -2.24
RGPD1-204ENST00000559485 CENPEQ02224 2701 aa1.05□□□□□ -2.24
RGPD1-204ENST00000559485 DMBT1Q9UGM3 2413 aaPredicted RBP1.04□□□□□ -2.24
RGPD1-204ENST00000559485 PCLOQ9Y6V0 5065 aa1.04□□□□□ -2.24
RGPD1-204ENST00000559485 NBEAL2Q6ZNJ1 2754 aa1.04□□□□□ -2.24
RGPD1-204ENST00000559485 ZANQ9Y493 2812 aa1.04□□□□□ -2.24
RGPD1-204ENST00000559485 PKD1P98161 4303 aa1.04□□□□□ -2.24
RGPD1-204ENST00000559485 RYR2Q92736 4967 aa1.04□□□□□ -2.24
RGPD1-204ENST00000559485 HSPG2P98160 4391 aa1.03□□□□□ -2.24
RGPD1-204ENST00000559485 MT1HL1P0DM35 61 aa1.03□□□□□ -2.24
RGPD1-204ENST00000559485 APOBP04114 4563 aaKnown RBP1.03□□□□□ -2.24
RGPD1-204ENST00000559485 DNAH5Q8TE73 4624 aa1.03□□□□□ -2.25
RGPD1-204ENST00000559485 EPPK1P58107 5090 aaKnown RBP1.02□□□□□ -2.25
RGPD1-204ENST00000559485 MGAM2Q2M2H8 2515 aa1.02□□□□□ -2.25
RGPD1-204ENST00000559485 FLNBO75369 2602 aaKnown RBP1.02□□□□□ -2.25
RGPD1-204ENST00000559485 STAB2Q8WWQ8 2551 aa1.01□□□□□ -2.25
RGPD1-204ENST00000559485 KRTAP5-11Q6L8G4 156 aa1.01□□□□□ -2.25
RGPD1-204ENST00000559485 KRTAP5-4Q6L8H1 288 aa1□□□□□ -2.25
RGPD1-204ENST00000559485 FAT1Q14517 4588 aa1□□□□□ -2.25
RGPD1-204ENST00000559485 FAT3Q8TDW7 4589 aa1□□□□□ -2.25
RGPD1-204ENST00000559485 STAB1Q9NY15 2570 aa1□□□□□ -2.25
RGPD1-204ENST00000559485 TENM3Q9P273 2699 aa0.99□□□□□ -2.25
RGPD1-204ENST00000559485 KRTAP5-9P26371 169 aa0.99□□□□□ -2.25
RGPD1-204ENST00000559485 STARD9Q9P2P6 4700 aa0.99□□□□□ -2.25
RGPD1-204ENST00000559485 TGP01266 2768 aa0.99□□□□□ -2.25
RGPD1-204ENST00000559485 COL6A5A8TX70 2615 aa0.99□□□□□ -2.25
RGPD1-204ENST00000559485 MUC17Q685J3 4493 aa0.98□□□□□ -2.25
RGPD1-204ENST00000559485 LPAP08519 4548 aa0.98□□□□□ -2.25
RGPD1-204ENST00000559485 TENM1Q9UKZ4 2725 aa0.98□□□□□ -2.25
RGPD1-204ENST00000559485 KRTAP4-4Q9BYR3 166 aa0.98□□□□□ -2.25
RGPD1-204ENST00000559485 KRTAP10-10P60014 251 aa0.97□□□□□ -2.25
RGPD1-204ENST00000559485 LRP1Q07954 4544 aaKnown RBP0.97□□□□□ -2.25
RGPD1-204ENST00000559485 KRTAP12-3P60328 96 aa0.97□□□□□ -2.25
RGPD1-204ENST00000559485 LCE3AQ5TA76 89 aa0.97□□□□□ -2.25
RGPD1-204ENST00000559485 FLGP20930 4061 aaPredicted RBP0.97□□□□□ -2.25
RGPD1-204ENST00000559485 KRTAP10-12P60413 245 aa0.97□□□□□ -2.25
RGPD1-204ENST00000559485 KRTAP5-1Q6L8H4 278 aa0.97□□□□□ -2.25
RGPD1-204ENST00000559485 LRP1BQ9NZR2 4599 aa0.96□□□□□ -2.26
RGPD1-204ENST00000559485 NBEAL1Q6ZS30 2694 aa0.96□□□□□ -2.26
RGPD1-204ENST00000559485 LCE1FQ5T754 118 aa0.96□□□□□ -2.26
RGPD1-204ENST00000559485 SPRR2GQ9BYE4 73 aa0.96□□□□□ -2.26
RGPD1-204ENST00000559485 KRTAP8-1Q8IUC2 63 aa0.95□□□□□ -2.26
RGPD1-204ENST00000559485 RYR1P21817 5038 aa0.95□□□□□ -2.26
RGPD1-204ENST00000559485 NOTCH1P46531 2555 aa0.95□□□□□ -2.26
RGPD1-204ENST00000559485 ABCA13Q86UQ4 5058 aa0.93□□□□□ -2.26
RGPD1-204ENST00000559485 KRTAP4-1Q9BYQ7 146 aa0.92□□□□□ -2.26
RGPD1-204ENST00000559485 LCE3CQ5T5A8 94 aa0.92□□□□□ -2.26
RGPD1-204ENST00000559485 MT3P25713 68 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms