RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 M0R2T5 61 aa0.08□□□□□ -2.4
VPS13C-207ENST00000558919 COX6B2Q6YFQ2 88 aa0.08□□□□□ -2.4
VPS13C-207ENST00000558919 SPRR2GQ9BYE4 73 aa0.08□□□□□ -2.4
VPS13C-207ENST00000558919 FAT2Q9NYQ8 4349 aa0.08□□□□□ -2.4
VPS13C-207ENST00000558919 RGPD2P0DJD1 1756 aa0.08□□□□□ -2.4
VPS13C-207ENST00000558919 CMYA5Q8N3K9 4069 aa0.08□□□□□ -2.4
VPS13C-207ENST00000558919 PDCD11Q14690 1871 aaKnown RBP0.07□□□□□ -2.4
VPS13C-207ENST00000558919 PKD1P98161 4303 aa0.07□□□□□ -2.4
VPS13C-207ENST00000558919 A0A087WXM4 84 aa0.07□□□□□ -2.4
VPS13C-207ENST00000558919 KRTAP20-2Q3LI61 65 aa0.07□□□□□ -2.4
VPS13C-207ENST00000558919 ATP5EP2Q5VTU8 51 aa0.07□□□□□ -2.4
VPS13C-207ENST00000558919 WFDC13Q8IUB5 93 aa0.07□□□□□ -2.4
VPS13C-207ENST00000558919 APOBP04114 4563 aaKnown RBP0.07□□□□□ -2.4
VPS13C-207ENST00000558919 USF3Q68DE3 2245 aa0.06□□□□□ -2.4
VPS13C-207ENST00000558919 IQGAP3Q86VI3 1631 aa0.06□□□□□ -2.4
VPS13C-207ENST00000558919 TRRAPQ9Y4A5 3859 aa0.06□□□□□ -2.4
VPS13C-207ENST00000558919 DNAH11Q96DT5 4516 aa0.06□□□□□ -2.4
VPS13C-207ENST00000558919 UMAD1C9J7I0 102 aa0.06□□□□□ -2.4
VPS13C-207ENST00000558919 IFI27P40305 119 aaPredicted RBP0.06□□□□□ -2.4
VPS13C-207ENST00000558919 BVES-AS1Q5T3Y7 98 aa0.06□□□□□ -2.4
VPS13C-207ENST00000558919 DEFB104AQ8WTQ1 72 aa0.06□□□□□ -2.4
VPS13C-207ENST00000558919 TCHHQ07283 1943 aa0.06□□□□□ -2.4
VPS13C-207ENST00000558919 DNAH3Q8TD57 4116 aa0.06□□□□□ -2.4
VPS13C-207ENST00000558919 TNXBP22105 4242 aa0.06□□□□□ -2.4
VPS13C-207ENST00000558919 MYO7BQ6PIF6 2116 aa0.05□□□□□ -2.4
VPS13C-207ENST00000558919 VPS13DQ5THJ4 4388 aa0.05□□□□□ -2.4
VPS13C-207ENST00000558919 DNAJC13O75165 2243 aa0.05□□□□□ -2.4
VPS13C-207ENST00000558919 GOLGA4Q13439 2230 aaKnown RBP0.05□□□□□ -2.4
VPS13C-207ENST00000558919 LYNX1G3V0Z9 82 aa0.05□□□□□ -2.4
VPS13C-207ENST00000558919 NDUFA3O95167 84 aa0.05□□□□□ -2.4
VPS13C-207ENST00000558919 IFI6P09912 130 aa0.05□□□□□ -2.4
VPS13C-207ENST00000558919 DEFB135Q30KP9 77 aa0.05□□□□□ -2.4
VPS13C-207ENST00000558919 DEFB121Q5J5C9 76 aa0.05□□□□□ -2.4
VPS13C-207ENST00000558919 DNAH6Q9C0G6 4158 aa0.04□□□□□ -2.4
VPS13C-207ENST00000558919 MUC17Q685J3 4493 aa0.04□□□□□ -2.4
VPS13C-207ENST00000558919 MT1HP80294 61 aa0.04□□□□□ -2.4
VPS13C-207ENST00000558919 LYSTQ99698 3801 aa0.04□□□□□ -2.4
VPS13C-207ENST00000558919 DNAH17Q9UFH2 4485 aa0.04□□□□□ -2.4
VPS13C-207ENST00000558919 PPLO60437 1756 aa0.04□□□□□ -2.4
VPS13C-207ENST00000558919 VPS13BQ7Z7G8 4022 aa0.03□□□□□ -2.4
VPS13C-207ENST00000558919 DNAH2Q9P225 4427 aa0.03□□□□□ -2.4
VPS13C-207ENST00000558919 DNAH8Q96JB1 4490 aa0.03□□□□□ -2.4
VPS13C-207ENST00000558919 C3orf79P0CE67 100 aa0.03□□□□□ -2.4
VPS13C-207ENST00000558919 SMIM13P0DJ93 91 aa0.03□□□□□ -2.4
VPS13C-207ENST00000558919 NREPQ16612 68 aa0.03□□□□□ -2.4
VPS13C-207ENST00000558919 SMIM5Q71RC9 77 aa0.03□□□□□ -2.4
VPS13C-207ENST00000558919 KRTAP8-1Q8IUC2 63 aa0.03□□□□□ -2.4
VPS13C-207ENST00000558919 DMDP11532 3685 aa0.03□□□□□ -2.4
VPS13C-207ENST00000558919 C18orf32Q8TCD1 76 aa0.02□□□□□ -2.41
VPS13C-207ENST00000558919 CD163L1Q9NR16 1453 aa0.02□□□□□ -2.41
VPS13C-207ENST00000558919 FLGP20930 4061 aaPredicted RBP0.02□□□□□ -2.41
VPS13C-207ENST00000558919 GCC2Q8IWJ2 1684 aa0.02□□□□□ -2.41
VPS13C-207ENST00000558919 KIF20BQ96Q89 1820 aa0.01□□□□□ -2.41
VPS13C-207ENST00000558919 H0YGG7 62 aa0.01□□□□□ -2.41
VPS13C-207ENST00000558919 NDUFA4O00483 81 aa0.01□□□□□ -2.41
VPS13C-207ENST00000558919 MT1HL1P0DM35 61 aa0.01□□□□□ -2.41
VPS13C-207ENST00000558919 HMGA1P17096 107 aaKnown RBP0.01□□□□□ -2.41
VPS13C-207ENST00000558919 LINC00158P58513 81 aa0.01□□□□□ -2.41
VPS13C-207ENST00000558919 KRTAP6-1Q3LI64 71 aa0.01□□□□□ -2.41
VPS13C-207ENST00000558919 ANKARQ7Z5J8 1434 aa0.01□□□□□ -2.41
VPS13C-207ENST00000558919 MT2AP02795 61 aa-0.01□□□□□ -2.41
VPS13C-207ENST00000558919 MT1FP04733 61 aa-0.02□□□□□ -2.41
VPS13C-207ENST00000558919 MT1BP07438 61 aa-0.02□□□□□ -2.41
VPS13C-207ENST00000558919 DEFA5Q01523 94 aa-0.02□□□□□ -2.41
VPS13C-207ENST00000558919 H3BVH4 76 aa-0.03□□□□□ -2.41
VPS13C-207ENST00000558919 MRPL33O75394 65 aaKnown RBP-0.03□□□□□ -2.41
VPS13C-207ENST00000558919 KRTAP19-2Q3LHN2 52 aa-0.03□□□□□ -2.41
VPS13C-207ENST00000558919 MYH4Q9Y623 1939 aa-0.04□□□□□ -2.42
VPS13C-207ENST00000558919 STATHP02808 62 aa-0.04□□□□□ -2.42
VPS13C-207ENST00000558919 UBL5Q9BZL1 73 aa-0.04□□□□□ -2.42
VPS13C-207ENST00000558919 DEFB131BA0A096LNP1 70 aa-0.05□□□□□ -2.42
VPS13C-207ENST00000558919 H0YAA0 97 aa-0.05□□□□□ -2.42
VPS13C-207ENST00000558919 KRTAP19-8Q3LI54 63 aa-0.05□□□□□ -2.42
VPS13C-207ENST00000558919 KRTAP6-2Q3LI66 62 aa-0.05□□□□□ -2.42
VPS13C-207ENST00000558919 KRTAP19-7Q3SYF9 63 aa-0.05□□□□□ -2.42
VPS13C-207ENST00000558919 SMCO4Q9NRQ5 59 aa-0.05□□□□□ -2.42
VPS13C-207ENST00000558919 MT1GP13640 62 aa-0.06□□□□□ -2.42
VPS13C-207ENST00000558919 TFF3Q07654 80 aa-0.06□□□□□ -2.42
VPS13C-207ENST00000558919 ENHOQ6UWT2 76 aa-0.06□□□□□ -2.42
VPS13C-207ENST00000558919 KCNQ1DNQ9H478 68 aa-0.06□□□□□ -2.42
VPS13C-207ENST00000558919 ANKRD36A6QL64 1941 aa-0.07□□□□□ -2.42
VPS13C-207ENST00000558919 PDCD5O14737 125 aa-0.07□□□□□ -2.42
VPS13C-207ENST00000558919 IAPPP10997 89 aa-0.07□□□□□ -2.42
VPS13C-207ENST00000558919 ATXN8Q156A1 80 aa-0.07□□□□□ -2.42
VPS13C-207ENST00000558919 MT1MQ8N339 61 aa-0.07□□□□□ -2.42
VPS13C-207ENST00000558919 RPS29P62273 56 aaKnown RBP-0.08□□□□□ -2.42
VPS13C-207ENST00000558919 GNG13Q9P2W3 67 aa-0.08□□□□□ -2.42
VPS13C-207ENST00000558919 ETDCA0A1B0GVM5 59 aa-0.09□□□□□ -2.42
VPS13C-207ENST00000558919 DEFB130BP0DP73 79 aa-0.09□□□□□ -2.42
VPS13C-207ENST00000558919 DEFB130AP0DP74 79 aa-0.09□□□□□ -2.42
VPS13C-207ENST00000558919 HILPDAQ9Y5L2 63 aa-0.09□□□□□ -2.42
VPS13C-207ENST00000558919 MT1AP04731 61 aa-0.1□□□□□ -2.43
VPS13C-207ENST00000558919 MT1EP04732 61 aa-0.1□□□□□ -2.43
VPS13C-207ENST00000558919 CRIP1P50238 77 aa-0.1□□□□□ -2.43
VPS13C-207ENST00000558919 TTTY10Q9BZA0 68 aa-0.1□□□□□ -2.43
VPS13C-207ENST00000558919 C9orf92A6NGG3 77 aa-0.11□□□□□ -2.43
VPS13C-207ENST00000558919 DEFB108AA8MXU0 73 aa-0.11□□□□□ -2.43
VPS13C-207ENST00000558919 H3BNG1 76 aa-0.11□□□□□ -2.43
VPS13C-207ENST00000558919 PRLHP81277 87 aa-0.11□□□□□ -2.43
VPS13C-207ENST00000558919 H3BSH0 61 aa-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms