RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 SETD2Q9BYW2 2564 aaPredicted RBP2.03□□□□□ -2.09
GPHN-215ENST00000557654 CUBNO60494 3623 aa2.02□□□□□ -2.09
GPHN-215ENST00000557654 A0A087WTM6 91 aa2.02□□□□□ -2.09
GPHN-215ENST00000557654 H0YAA0 97 aa2.02□□□□□ -2.09
GPHN-215ENST00000557654 Q6ZSA8 131 aa2.02□□□□□ -2.09
GPHN-215ENST00000557654 F8P00451 2351 aa2.02□□□□□ -2.09
GPHN-215ENST00000557654 MTORP42345 2549 aa2.01□□□□□ -2.09
GPHN-215ENST00000557654 VWFP04275 2813 aa2.01□□□□□ -2.09
GPHN-215ENST00000557654 ANK2Q01484 3957 aa2□□□□□ -2.09
GPHN-215ENST00000557654 H1FX-AS1Q4G0G2 97 aa2□□□□□ -2.09
GPHN-215ENST00000557654 ACANP16112 2415 aa2□□□□□ -2.09
GPHN-215ENST00000557654 A0A1B0GU33 70 aa1.99□□□□□ -2.09
GPHN-215ENST00000557654 K7ERS5 55 aa1.99□□□□□ -2.09
GPHN-215ENST00000557654 CENPEQ02224 2701 aa1.99□□□□□ -2.09
GPHN-215ENST00000557654 DNAH2Q9P225 4427 aa1.99□□□□□ -2.09
GPHN-215ENST00000557654 OTOGQ6ZRI0 2925 aa1.99□□□□□ -2.09
GPHN-215ENST00000557654 KMT2BQ9UMN6 2715 aaPredicted RBP1.98□□□□□ -2.09
GPHN-215ENST00000557654 TENM3Q9P273 2699 aa1.98□□□□□ -2.09
GPHN-215ENST00000557654 CMYA5Q8N3K9 4069 aa1.98□□□□□ -2.09
GPHN-215ENST00000557654 NUPR2A6NF83 97 aa1.98□□□□□ -2.09
GPHN-215ENST00000557654 SACSQ9NZJ4 4579 aa1.97□□□□□ -2.09
GPHN-215ENST00000557654 USP24Q9UPU5 2620 aa1.97□□□□□ -2.09
GPHN-215ENST00000557654 SPINK1P00995 79 aa1.97□□□□□ -2.09
GPHN-215ENST00000557654 RPS29P62273 56 aaKnown RBP1.97□□□□□ -2.09
GPHN-215ENST00000557654 PLECQ15149 4684 aaKnown RBP1.97□□□□□ -2.09
GPHN-215ENST00000557654 DNAH11Q96DT5 4516 aa1.96□□□□□ -2.1
GPHN-215ENST00000557654 PKD1L1Q8TDX9 2849 aa1.96□□□□□ -2.1
GPHN-215ENST00000557654 TENM4Q6N022 2769 aa1.96□□□□□ -2.1
GPHN-215ENST00000557654 PRKDCP78527 4128 aaKnown RBP1.96□□□□□ -2.1
GPHN-215ENST00000557654 TRRAPQ9Y4A5 3859 aa1.95□□□□□ -2.1
GPHN-215ENST00000557654 COX6B2Q6YFQ2 88 aa1.95□□□□□ -2.1
GPHN-215ENST00000557654 SRRM2Q9UQ35 2752 aaKnown RBP1.95□□□□□ -2.1
GPHN-215ENST00000557654 TEP1Q99973 2627 aaKnown RBP1.95□□□□□ -2.1
GPHN-215ENST00000557654 TENM1Q9UKZ4 2725 aa1.95□□□□□ -2.1
GPHN-215ENST00000557654 C20orf166-AS1Q96NR2 134 aa1.94□□□□□ -2.1
GPHN-215ENST00000557654 NSD1Q96L73 2696 aaPredicted RBP1.94□□□□□ -2.1
GPHN-215ENST00000557654 BAHCC1Q9P281 2608 aa1.93□□□□□ -2.1
GPHN-215ENST00000557654 CRCT1Q9UGL9 99 aa1.93□□□□□ -2.1
GPHN-215ENST00000557654 ATRQ13535 2644 aa1.93□□□□□ -2.1
GPHN-215ENST00000557654 FRAS1Q86XX4 4008 aa1.93□□□□□ -2.1
GPHN-215ENST00000557654 HECTD1Q9ULT8 2610 aa1.92□□□□□ -2.1
GPHN-215ENST00000557654 RPL37P61927 97 aaKnown RBP1.92□□□□□ -2.1
GPHN-215ENST00000557654 DNAH5Q8TE73 4624 aa1.92□□□□□ -2.1
GPHN-215ENST00000557654 MAST4O15021 2626 aa1.92□□□□□ -2.1
GPHN-215ENST00000557654 DNAH6Q9C0G6 4158 aa1.92□□□□□ -2.1
GPHN-215ENST00000557654 LRP1BQ9NZR2 4599 aa1.92□□□□□ -2.1
GPHN-215ENST00000557654 LYSTQ99698 3801 aa1.91□□□□□ -2.1
GPHN-215ENST00000557654 TPRXLQ17RH7 258 aa1.91□□□□□ -2.1
GPHN-215ENST00000557654 CRIPTQ9P021 101 aa1.9□□□□□ -2.11
GPHN-215ENST00000557654 ITPR2Q14571 2701 aa1.9□□□□□ -2.11
GPHN-215ENST00000557654 FLNBO75369 2602 aaKnown RBP1.9□□□□□ -2.11
GPHN-215ENST00000557654 FASNP49327 2511 aaKnown RBP1.9□□□□□ -2.11
GPHN-215ENST00000557654 HELZ2Q9BYK8 2649 aaKnown RBP1.89□□□□□ -2.11
GPHN-215ENST00000557654 DNAH7Q8WXX0 4024 aa1.88□□□□□ -2.11
GPHN-215ENST00000557654 PKHD1L1Q86WI1 4243 aa1.88□□□□□ -2.11
GPHN-215ENST00000557654 HECTD4Q9Y4D8 3996 aa1.86□□□□□ -2.11
GPHN-215ENST00000557654 KRTAP13-4Q3LI77 160 aa1.86□□□□□ -2.11
GPHN-215ENST00000557654 R4GN34 69 aa1.86□□□□□ -2.11
GPHN-215ENST00000557654 S4R3F8 94 aa1.85□□□□□ -2.11
GPHN-215ENST00000557654 STARD9Q9P2P6 4700 aa1.85□□□□□ -2.11
GPHN-215ENST00000557654 CSMD3Q7Z407 3707 aa1.85□□□□□ -2.11
GPHN-215ENST00000557654 STAB2Q8WWQ8 2551 aa1.84□□□□□ -2.12
GPHN-215ENST00000557654 COL7A1Q02388 2944 aa1.84□□□□□ -2.12
GPHN-215ENST00000557654 FAT2Q9NYQ8 4349 aa1.83□□□□□ -2.12
GPHN-215ENST00000557654 NBEAL1Q6ZS30 2694 aa1.83□□□□□ -2.12
GPHN-215ENST00000557654 C9orf92A6NGG3 77 aa1.83□□□□□ -2.12
GPHN-215ENST00000557654 KRTAP4-1Q9BYQ7 146 aa1.83□□□□□ -2.12
GPHN-215ENST00000557654 C10orf95Q9H7T3 257 aa1.83□□□□□ -2.12
GPHN-215ENST00000557654 DYNC1H1Q14204 4646 aaKnown RBP1.83□□□□□ -2.12
GPHN-215ENST00000557654 TGP01266 2768 aa1.82□□□□□ -2.12
GPHN-215ENST00000557654 A0A0D9SG42 100 aa1.82□□□□□ -2.12
GPHN-215ENST00000557654 KRTAP12-1P59990 96 aa1.82□□□□□ -2.12
GPHN-215ENST00000557654 MEGF8Q7Z7M0 2845 aa1.82□□□□□ -2.12
GPHN-215ENST00000557654 NOTCH1P46531 2555 aa1.82□□□□□ -2.12
GPHN-215ENST00000557654 FLG2Q5D862 2391 aaPredicted RBP1.81□□□□□ -2.12
GPHN-215ENST00000557654 APOBP04114 4563 aaKnown RBP1.81□□□□□ -2.12
GPHN-215ENST00000557654 M0QZ58 72 aa1.81□□□□□ -2.12
GPHN-215ENST00000557654 STAB1Q9NY15 2570 aa1.81□□□□□ -2.12
GPHN-215ENST00000557654 FAT3Q8TDW7 4589 aa1.8□□□□□ -2.12
GPHN-215ENST00000557654 PKD1P98161 4303 aa1.8□□□□□ -2.12
GPHN-215ENST00000557654 LRP1Q07954 4544 aaKnown RBP1.8□□□□□ -2.12
GPHN-215ENST00000557654 COL6A5A8TX70 2615 aa1.8□□□□□ -2.12
GPHN-215ENST00000557654 FBN3Q75N90 2809 aa1.79□□□□□ -2.12
GPHN-215ENST00000557654 HSPG2P98160 4391 aa1.78□□□□□ -2.12
GPHN-215ENST00000557654 KRTAP10-4P60372 401 aaPredicted RBP1.78□□□□□ -2.12
GPHN-215ENST00000557654 VPS13BQ7Z7G8 4022 aa1.78□□□□□ -2.12
GPHN-215ENST00000557654 KMT2AQ03164 3969 aa1.77□□□□□ -2.13
GPHN-215ENST00000557654 TNXBP22105 4242 aa1.77□□□□□ -2.13
GPHN-215ENST00000557654 MYCBP2O75592 4640 aa1.77□□□□□ -2.13
GPHN-215ENST00000557654 FAT1Q14517 4588 aa1.77□□□□□ -2.13
GPHN-215ENST00000557654 PKHD1P08F94 4074 aa1.76□□□□□ -2.13
GPHN-215ENST00000557654 MGAM2Q2M2H8 2515 aa1.75□□□□□ -2.13
GPHN-215ENST00000557654 PLAC4Q8WY50 150 aa1.75□□□□□ -2.13
GPHN-215ENST00000557654 HYDINQ4G0P3 5121 aa1.71□□□□□ -2.14
GPHN-215ENST00000557654 SMR3BP02814 79 aaPredicted RBP1.7□□□□□ -2.14
GPHN-215ENST00000557654 DNHD1Q96M86 4753 aa1.68□□□□□ -2.14
GPHN-215ENST00000557654 DMBT1Q9UGM3 2413 aaPredicted RBP1.67□□□□□ -2.14
GPHN-215ENST00000557654 HERC1Q15751 4861 aa1.64□□□□□ -2.15
GPHN-215ENST00000557654 PRO2289Q9P1D8 64 aa1.62□□□□□ -2.15
GPHN-215ENST00000557654 MT1HL1P0DM35 61 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms