RNA–Protein interactions for RNA: ENST00000556996.1

CCDC175-205, Transcript of coiled-coil domain containing 175, humanhuman

TSL 4

Gene CCDC175, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175-205ENST00000556996 HUWE1Q7Z6Z7 4374 aaKnown RBP3.67□□□□□ -1.82
CCDC175-205ENST00000556996 CRIPTQ9P021 101 aa3.67□□□□□ -1.82
CCDC175-205ENST00000556996 DNAH8Q96JB1 4490 aa3.67□□□□□ -1.82
CCDC175-205ENST00000556996 DNAH3Q8TD57 4116 aa3.66□□□□□ -1.82
CCDC175-205ENST00000556996 ZNF469Q96JG9 3925 aaPredicted RBP3.66□□□□□ -1.82
CCDC175-205ENST00000556996 VPS13DQ5THJ4 4388 aa3.65□□□□□ -1.82
CCDC175-205ENST00000556996 DNAH10Q8IVF4 4471 aa3.65□□□□□ -1.82
CCDC175-205ENST00000556996 TPRXLQ17RH7 258 aa3.65□□□□□ -1.83
CCDC175-205ENST00000556996 DYNC2H1Q8NCM8 4307 aaKnown RBP3.65□□□□□ -1.83
CCDC175-205ENST00000556996 OTOGQ6ZRI0 2925 aa3.64□□□□□ -1.83
CCDC175-205ENST00000556996 TENM3Q9P273 2699 aa3.64□□□□□ -1.83
CCDC175-205ENST00000556996 VWFP04275 2813 aa3.64□□□□□ -1.83
CCDC175-205ENST00000556996 ANK2Q01484 3957 aa3.63□□□□□ -1.83
CCDC175-205ENST00000556996 CENPEQ02224 2701 aa3.62□□□□□ -1.83
CCDC175-205ENST00000556996 DNAH17Q9UFH2 4485 aa3.62□□□□□ -1.83
CCDC175-205ENST00000556996 CUBNO60494 3623 aa3.62□□□□□ -1.83
CCDC175-205ENST00000556996 TEP1Q99973 2627 aaKnown RBP3.61□□□□□ -1.83
CCDC175-205ENST00000556996 BAHCC1Q9P281 2608 aa3.61□□□□□ -1.83
CCDC175-205ENST00000556996 TENM4Q6N022 2769 aa3.61□□□□□ -1.83
CCDC175-205ENST00000556996 DNAH9Q9NYC9 4486 aa3.6□□□□□ -1.83
CCDC175-205ENST00000556996 HECTD1Q9ULT8 2610 aa3.59□□□□□ -1.83
CCDC175-205ENST00000556996 USP24Q9UPU5 2620 aa3.58□□□□□ -1.84
CCDC175-205ENST00000556996 PKD1L1Q8TDX9 2849 aa3.58□□□□□ -1.84
CCDC175-205ENST00000556996 SRRM2Q9UQ35 2752 aaKnown RBP3.58□□□□□ -1.84
CCDC175-205ENST00000556996 ATRQ13535 2644 aa3.57□□□□□ -1.84
CCDC175-205ENST00000556996 MAST4O15021 2626 aa3.57□□□□□ -1.84
CCDC175-205ENST00000556996 HELZ2Q9BYK8 2649 aaKnown RBP3.57□□□□□ -1.84
CCDC175-205ENST00000556996 S4R3F8 94 aa3.56□□□□□ -1.84
CCDC175-205ENST00000556996 NSD1Q96L73 2696 aaPredicted RBP3.55□□□□□ -1.84
CCDC175-205ENST00000556996 CMYA5Q8N3K9 4069 aa3.53□□□□□ -1.84
CCDC175-205ENST00000556996 LUZP6Q538Z0 58 aa3.53□□□□□ -1.84
CCDC175-205ENST00000556996 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
CCDC175-205ENST00000556996 TENM1Q9UKZ4 2725 aa3.53□□□□□ -1.84
CCDC175-205ENST00000556996 FASNP49327 2511 aaKnown RBP3.52□□□□□ -1.85
CCDC175-205ENST00000556996 A0A0D9SG42 100 aa3.52□□□□□ -1.85
CCDC175-205ENST00000556996 KRTAP13-4Q3LI77 160 aa3.52□□□□□ -1.85
CCDC175-205ENST00000556996 PRKDCP78527 4128 aaKnown RBP3.52□□□□□ -1.85
CCDC175-205ENST00000556996 TRRAPQ9Y4A5 3859 aa3.52□□□□□ -1.85
CCDC175-205ENST00000556996 FLNBO75369 2602 aaKnown RBP3.51□□□□□ -1.85
CCDC175-205ENST00000556996 FRAS1Q86XX4 4008 aa3.5□□□□□ -1.85
CCDC175-205ENST00000556996 C9orf92A6NGG3 77 aa3.49□□□□□ -1.85
CCDC175-205ENST00000556996 M0QZ58 72 aa3.49□□□□□ -1.85
CCDC175-205ENST00000556996 FLG2Q5D862 2391 aaPredicted RBP3.49□□□□□ -1.85
CCDC175-205ENST00000556996 FBN1P35555 2871 aaKnown RBP3.48□□□□□ -1.85
CCDC175-205ENST00000556996 DNAH11Q96DT5 4516 aa3.47□□□□□ -1.85
CCDC175-205ENST00000556996 KRTAP12-1P59990 96 aa3.47□□□□□ -1.85
CCDC175-205ENST00000556996 SACSQ9NZJ4 4579 aa3.46□□□□□ -1.86
CCDC175-205ENST00000556996 LYSTQ99698 3801 aa3.46□□□□□ -1.86
CCDC175-205ENST00000556996 ITPR2Q14571 2701 aa3.45□□□□□ -1.86
CCDC175-205ENST00000556996 DNAH2Q9P225 4427 aa3.45□□□□□ -1.86
CCDC175-205ENST00000556996 DNAH6Q9C0G6 4158 aa3.45□□□□□ -1.86
CCDC175-205ENST00000556996 DNAH7Q8WXX0 4024 aa3.45□□□□□ -1.86
CCDC175-205ENST00000556996 TGP01266 2768 aa3.44□□□□□ -1.86
CCDC175-205ENST00000556996 PLECQ15149 4684 aaKnown RBP3.43□□□□□ -1.86
CCDC175-205ENST00000556996 KRTAP5-7Q6L8G8 165 aa3.43□□□□□ -1.86
CCDC175-205ENST00000556996 STAB2Q8WWQ8 2551 aa3.43□□□□□ -1.86
CCDC175-205ENST00000556996 HECTD4Q9Y4D8 3996 aa3.42□□□□□ -1.86
CCDC175-205ENST00000556996 PLAC4Q8WY50 150 aa3.41□□□□□ -1.86
CCDC175-205ENST00000556996 NBEAL1Q6ZS30 2694 aa3.39□□□□□ -1.87
CCDC175-205ENST00000556996 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
CCDC175-205ENST00000556996 MEGF8Q7Z7M0 2845 aa3.39□□□□□ -1.87
CCDC175-205ENST00000556996 NOTCH1P46531 2555 aa3.38□□□□□ -1.87
CCDC175-205ENST00000556996 COL7A1Q02388 2944 aa3.34□□□□□ -1.87
CCDC175-205ENST00000556996 DNAH5Q8TE73 4624 aa3.34□□□□□ -1.87
CCDC175-205ENST00000556996 CSMD3Q7Z407 3707 aa3.33□□□□□ -1.88
CCDC175-205ENST00000556996 PKHD1L1Q86WI1 4243 aa3.33□□□□□ -1.88
CCDC175-205ENST00000556996 COL6A5A8TX70 2615 aa3.33□□□□□ -1.88
CCDC175-205ENST00000556996 STAB1Q9NY15 2570 aa3.32□□□□□ -1.88
CCDC175-205ENST00000556996 LRP1BQ9NZR2 4599 aa3.31□□□□□ -1.88
CCDC175-205ENST00000556996 MGAM2Q2M2H8 2515 aa3.29□□□□□ -1.88
CCDC175-205ENST00000556996 STARD9Q9P2P6 4700 aa3.28□□□□□ -1.88
CCDC175-205ENST00000556996 KRTAP10-4P60372 401 aaPredicted RBP3.27□□□□□ -1.89
CCDC175-205ENST00000556996 R4GN34 69 aa3.24□□□□□ -1.89
CCDC175-205ENST00000556996 FBN3Q75N90 2809 aa3.22□□□□□ -1.89
CCDC175-205ENST00000556996 VPS13BQ7Z7G8 4022 aa3.22□□□□□ -1.89
CCDC175-205ENST00000556996 DMBT1Q9UGM3 2413 aaPredicted RBP3.21□□□□□ -1.9
CCDC175-205ENST00000556996 SMR3BP02814 79 aaPredicted RBP3.2□□□□□ -1.9
CCDC175-205ENST00000556996 PKHD1P08F94 4074 aa3.2□□□□□ -1.9
CCDC175-205ENST00000556996 KMT2AQ03164 3969 aa3.19□□□□□ -1.9
CCDC175-205ENST00000556996 APOBP04114 4563 aaKnown RBP3.19□□□□□ -1.9
CCDC175-205ENST00000556996 PRO2289Q9P1D8 64 aa3.18□□□□□ -1.9
CCDC175-205ENST00000556996 PKD1P98161 4303 aa3.18□□□□□ -1.9
CCDC175-205ENST00000556996 LRP1Q07954 4544 aaKnown RBP3.17□□□□□ -1.9
CCDC175-205ENST00000556996 DYNC1H1Q14204 4646 aaKnown RBP3.17□□□□□ -1.9
CCDC175-205ENST00000556996 FAT2Q9NYQ8 4349 aa3.17□□□□□ -1.9
CCDC175-205ENST00000556996 TNXBP22105 4242 aa3.16□□□□□ -1.9
CCDC175-205ENST00000556996 INE1O15225 51 aa3.13□□□□□ -1.91
CCDC175-205ENST00000556996 FAT3Q8TDW7 4589 aa3.12□□□□□ -1.91
CCDC175-205ENST00000556996 HSPG2P98160 4391 aa3.12□□□□□ -1.91
CCDC175-205ENST00000556996 TNP1P09430 55 aa3.1□□□□□ -1.91
CCDC175-205ENST00000556996 FAT1Q14517 4588 aa3.1□□□□□ -1.91
CCDC175-205ENST00000556996 MYCBP2O75592 4640 aa3.08□□□□□ -1.92
CCDC175-205ENST00000556996 KRTAP12-3P60328 96 aa3.07□□□□□ -1.92
CCDC175-205ENST00000556996 Q5VSD8 79 aa3.05□□□□□ -1.92
CCDC175-205ENST00000556996 KRTAP12-4P60329 112 aa3.01□□□□□ -1.93
CCDC175-205ENST00000556996 MT1HL1P0DM35 61 aa2.97□□□□□ -1.93
CCDC175-205ENST00000556996 KRTAP6-3Q3LI67 103 aa2.96□□□□□ -1.94
CCDC175-205ENST00000556996 DNHD1Q96M86 4753 aa2.95□□□□□ -1.94
CCDC175-205ENST00000556996 HYDINQ4G0P3 5121 aa2.95□□□□□ -1.94
CCDC175-205ENST00000556996 KRTAP21-2Q3LI59 83 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms