RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 CCKP06307 115 aa0.99□□□□□ -2.25
SCFD1-219ENST00000556413 Q5VV11 94 aa0.99□□□□□ -2.25
SCFD1-219ENST00000556413 ANKRD29Q8N6D5 301 aa0.99□□□□□ -2.25
SCFD1-219ENST00000556413 RAB37Q96AX2 223 aa0.99□□□□□ -2.25
SCFD1-219ENST00000556413 C14orf144Q96I85 54 aa0.99□□□□□ -2.25
SCFD1-219ENST00000556413 LINC00472Q9H8W2 130 aa0.99□□□□□ -2.25
SCFD1-219ENST00000556413 KRTAP2-3P0C7H8 128 aa0.98□□□□□ -2.25
SCFD1-219ENST00000556413 FXYD2P54710 66 aa0.98□□□□□ -2.25
SCFD1-219ENST00000556413 C4orf26Q17RF5 130 aa0.98□□□□□ -2.25
SCFD1-219ENST00000556413 BVES-AS1Q5T3Y7 98 aa0.98□□□□□ -2.25
SCFD1-219ENST00000556413 C2orf91Q6ZV80 131 aa0.98□□□□□ -2.25
SCFD1-219ENST00000556413 COPS9Q8WXC6 57 aa0.98□□□□□ -2.25
SCFD1-219ENST00000556413 NAA38Q9BRA0 125 aaKnown RBP0.98□□□□□ -2.25
SCFD1-219ENST00000556413 KRTAP2-4Q9BYR9 128 aa0.98□□□□□ -2.25
SCFD1-219ENST00000556413 IMUPQ9GZP8 106 aa0.98□□□□□ -2.25
SCFD1-219ENST00000556413 IGKV3D-7A0A0C4DH55 119 aa0.97□□□□□ -2.25
SCFD1-219ENST00000556413 HSBP1L1C9JCN9 74 aa0.97□□□□□ -2.25
SCFD1-219ENST00000556413 SPRR2DP22532 72 aa0.97□□□□□ -2.25
SCFD1-219ENST00000556413 H1FX-AS1Q4G0G2 97 aa0.97□□□□□ -2.25
SCFD1-219ENST00000556413 SPATA45Q537H7 98 aa0.97□□□□□ -2.25
SCFD1-219ENST00000556413 HIST3H2BBQ8N257 126 aa0.97□□□□□ -2.25
SCFD1-219ENST00000556413 HIST1H2BLQ99880 126 aa0.97□□□□□ -2.25
SCFD1-219ENST00000556413 A0A087WVE0 104 aa0.96□□□□□ -2.26
SCFD1-219ENST00000556413 TRBV7-4A0A0J9YYF1 115 aa0.96□□□□□ -2.26
SCFD1-219ENST00000556413 FAM240AA0A1B0GVK7 77 aa0.96□□□□□ -2.26
SCFD1-219ENST00000556413 C8orf87E5RJ46 101 aa0.96□□□□□ -2.26
SCFD1-219ENST00000556413 K7EQZ3 153 aa0.96□□□□□ -2.26
SCFD1-219ENST00000556413 DNAL4O96015 105 aa0.96□□□□□ -2.26
SCFD1-219ENST00000556413 COX8AP10176 69 aa0.96□□□□□ -2.26
SCFD1-219ENST00000556413 KRTAP19-8Q3LI54 63 aa0.96□□□□□ -2.26
SCFD1-219ENST00000556413 LCA10Q71F78 164 aa0.96□□□□□ -2.26
SCFD1-219ENST00000556413 PPDPFLQ8WWR9 84 aa0.96□□□□□ -2.26
SCFD1-219ENST00000556413 ORMDL1Q9P0S3 153 aa0.96□□□□□ -2.26
SCFD1-219ENST00000556413 MMP24-AS1A0A0U1RRL7 71 aa0.95□□□□□ -2.26
SCFD1-219ENST00000556413 A6NED7 52 aa0.95□□□□□ -2.26
SCFD1-219ENST00000556413 S100A2P29034 98 aa0.95□□□□□ -2.26
SCFD1-219ENST00000556413 KRTAP8-1Q8IUC2 63 aa0.95□□□□□ -2.26
SCFD1-219ENST00000556413 C14orf132Q9NPU4 83 aa0.95□□□□□ -2.26
SCFD1-219ENST00000556413 S4R3F8 94 aa0.95□□□□□ -2.26
SCFD1-219ENST00000556413 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
SCFD1-219ENST00000556413 A0A1B0GU33 70 aa0.94□□□□□ -2.26
SCFD1-219ENST00000556413 H0YGX0 51 aa0.94□□□□□ -2.26
SCFD1-219ENST00000556413 K7EP34 96 aa0.94□□□□□ -2.26
SCFD1-219ENST00000556413 SCGB1C2P0DMR2 95 aa0.94□□□□□ -2.26
SCFD1-219ENST00000556413 MT1XP80297 61 aa0.94□□□□□ -2.26
SCFD1-219ENST00000556413 C7orf65Q6ZTY9 151 aa0.94□□□□□ -2.26
SCFD1-219ENST00000556413 MRPL34Q9BQ48 92 aaKnown RBP0.94□□□□□ -2.26
SCFD1-219ENST00000556413 ANAPC13Q9BS18 74 aa0.94□□□□□ -2.26
SCFD1-219ENST00000556413 SPRR2GQ9BYE4 73 aa0.94□□□□□ -2.26
SCFD1-219ENST00000556413 KRTAP2-1Q9BYU5 128 aa0.94□□□□□ -2.26
SCFD1-219ENST00000556413 PRO1854Q9UHT4 67 aa0.94□□□□□ -2.26
SCFD1-219ENST00000556413 hDV103S1A0JD37 113 aa0.93□□□□□ -2.26
SCFD1-219ENST00000556413 HCG22E2RYF7 251 aa0.93□□□□□ -2.26
SCFD1-219ENST00000556413 NDUFB1O75438 58 aa0.93□□□□□ -2.26
SCFD1-219ENST00000556413 SNCGO76070 127 aa0.93□□□□□ -2.26
SCFD1-219ENST00000556413 KLKP1Q107X0 134 aa0.93□□□□□ -2.26
SCFD1-219ENST00000556413 Q6ZQT0 140 aa0.93□□□□□ -2.26
SCFD1-219ENST00000556413 PRR15Q8IV56 129 aa0.93□□□□□ -2.26
SCFD1-219ENST00000556413 TMEM254Q8TBM7 123 aa0.93□□□□□ -2.26
SCFD1-219ENST00000556413 DSCR8Q96T75 97 aa0.93□□□□□ -2.26
SCFD1-219ENST00000556413 VAMP8Q9BV40 100 aa0.93□□□□□ -2.26
SCFD1-219ENST00000556413 C9JAW5 83 aa0.92□□□□□ -2.26
SCFD1-219ENST00000556413 J3KT08 172 aa0.92□□□□□ -2.26
SCFD1-219ENST00000556413 TMEM256-PLSCR3K7ERE1 68 aa0.92□□□□□ -2.26
SCFD1-219ENST00000556413 S100A6P06703 90 aa0.92□□□□□ -2.26
SCFD1-219ENST00000556413 BAALC-AS2P0C853 105 aa0.92□□□□□ -2.26
SCFD1-219ENST00000556413 DSTQ03001 7570 aaKnown RBP0.92□□□□□ -2.26
SCFD1-219ENST00000556413 A0A1B0GX51 115 aa0.91□□□□□ -2.26
SCFD1-219ENST00000556413 HSD52Q0P140 79 aa0.91□□□□□ -2.26
SCFD1-219ENST00000556413 NREPQ16612 68 aa0.91□□□□□ -2.26
SCFD1-219ENST00000556413 CSAG1Q6PB30 78 aa0.91□□□□□ -2.26
SCFD1-219ENST00000556413 HIGD1BQ9P298 99 aa0.91□□□□□ -2.26
SCFD1-219ENST00000556413 DLEU1O43261 78 aa0.9□□□□□ -2.27
SCFD1-219ENST00000556413 LINC01554Q52M75 96 aa0.9□□□□□ -2.27
SCFD1-219ENST00000556413 CASC2Q6XLA1 102 aa0.9□□□□□ -2.27
SCFD1-219ENST00000556413 LOC110117498A0A087WWA1 95 aa0.89□□□□□ -2.27
SCFD1-219ENST00000556413 A8MUN3 132 aa0.89□□□□□ -2.27
SCFD1-219ENST00000556413 COX6CP09669 75 aa0.89□□□□□ -2.27
SCFD1-219ENST00000556413 S100A1P23297 94 aa0.89□□□□□ -2.27
SCFD1-219ENST00000556413 MT4P47944 62 aa0.89□□□□□ -2.27
SCFD1-219ENST00000556413 ATXN8Q156A1 80 aa0.89□□□□□ -2.27
SCFD1-219ENST00000556413 BATFQ16520 125 aa0.89□□□□□ -2.27
SCFD1-219ENST00000556413 PYY3Q5JQD4 70 aa0.89□□□□□ -2.27
SCFD1-219ENST00000556413 V9GYY9 64 aa0.88□□□□□ -2.27
SCFD1-219ENST00000556413 TSTD3H0UI37 97 aa0.87□□□□□ -2.27
SCFD1-219ENST00000556413 M0QZ58 72 aa0.87□□□□□ -2.27
SCFD1-219ENST00000556413 PLAC4Q8WY50 150 aa0.87□□□□□ -2.27
SCFD1-219ENST00000556413 SPCS1Q9Y6A9 102 aa0.87□□□□□ -2.27
SCFD1-219ENST00000556413 JMJD7-PLA2G4BH0Y9G9 81 aa0.86□□□□□ -2.27
SCFD1-219ENST00000556413 PDE6GP18545 87 aa0.86□□□□□ -2.27
SCFD1-219ENST00000556413 PRO2289Q9P1D8 64 aa0.86□□□□□ -2.27
SCFD1-219ENST00000556413 UQCR10Q9UDW1 63 aa0.86□□□□□ -2.27
SCFD1-219ENST00000556413 AHNAKQ09666 5890 aaKnown RBP0.86□□□□□ -2.27
SCFD1-219ENST00000556413 CYP4F30PQ9H0H9 118 aa0.85□□□□□ -2.27
SCFD1-219ENST00000556413 A0A1W2PPM0 123 aa0.84□□□□□ -2.27
SCFD1-219ENST00000556413 H0YAA0 97 aa0.84□□□□□ -2.27
SCFD1-219ENST00000556413 NDUFC1O43677 76 aa0.84□□□□□ -2.27
SCFD1-219ENST00000556413 CRIPTQ9P021 101 aa0.84□□□□□ -2.27
SCFD1-219ENST00000556413 H0Y9P7 68 aa0.83□□□□□ -2.28
SCFD1-219ENST00000556413 TAX1BP3O14907 124 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms