RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 KRTAP9-6A8MVA2 160 aa1.47□□□□□ -2.17
PRPF39-207ENST00000554439 CIRBP-AS1Q8TBR5 109 aa1.47□□□□□ -2.17
PRPF39-207ENST00000554439 NBDYA0A0U1RRE5 68 aa1.47□□□□□ -2.17
PRPF39-207ENST00000554439 C8orf87E5RJ46 101 aa1.47□□□□□ -2.17
PRPF39-207ENST00000554439 ACYP2P14621 99 aa1.47□□□□□ -2.17
PRPF39-207ENST00000554439 VPS13BQ7Z7G8 4022 aa1.46□□□□□ -2.18
PRPF39-207ENST00000554439 A0A1B0GU69 56 aa1.46□□□□□ -2.18
PRPF39-207ENST00000554439 ZNF861PO60384 105 aa1.46□□□□□ -2.18
PRPF39-207ENST00000554439 DMAC1Q96GE9 116 aa1.46□□□□□ -2.18
PRPF39-207ENST00000554439 TYMSOSQ8TAI1 123 aa1.46□□□□□ -2.18
PRPF39-207ENST00000554439 ZNF706Q9Y5V0 76 aaPredicted RBP1.46□□□□□ -2.18
PRPF39-207ENST00000554439 DNAH5Q8TE73 4624 aa1.46□□□□□ -2.18
PRPF39-207ENST00000554439 FAT2Q9NYQ8 4349 aa1.46□□□□□ -2.18
PRPF39-207ENST00000554439 A0A087WTM6 91 aa1.45□□□□□ -2.18
PRPF39-207ENST00000554439 RTL8CO15255 209 aa1.45□□□□□ -2.18
PRPF39-207ENST00000554439 LRP1BQ9NZR2 4599 aa1.45□□□□□ -2.18
PRPF39-207ENST00000554439 MIR22HGQ0VDD5 57 aa1.44□□□□□ -2.18
PRPF39-207ENST00000554439 SPATA8Q6RVD6 105 aa1.44□□□□□ -2.18
PRPF39-207ENST00000554439 IGLV7-43P04211 117 aa1.44□□□□□ -2.18
PRPF39-207ENST00000554439 LINC01554Q52M75 96 aa1.44□□□□□ -2.18
PRPF39-207ENST00000554439 CSAG1Q6PB30 78 aa1.44□□□□□ -2.18
PRPF39-207ENST00000554439 SPINK1P00995 79 aa1.44□□□□□ -2.18
PRPF39-207ENST00000554439 UQCR11O14957 56 aa1.43□□□□□ -2.18
PRPF39-207ENST00000554439 KRTAP13-2Q52LG2 175 aa1.43□□□□□ -2.18
PRPF39-207ENST00000554439 FLG2Q5D862 2391 aaPredicted RBP1.43□□□□□ -2.18
PRPF39-207ENST00000554439 PKD1P98161 4303 aa1.42□□□□□ -2.18
PRPF39-207ENST00000554439 PKHD1P08F94 4074 aa1.42□□□□□ -2.18
PRPF39-207ENST00000554439 NUPR2A6NF83 97 aa1.42□□□□□ -2.18
PRPF39-207ENST00000554439 HYDINQ4G0P3 5121 aa1.42□□□□□ -2.18
PRPF39-207ENST00000554439 KRTAP10-5P60370 271 aa1.41□□□□□ -2.18
PRPF39-207ENST00000554439 SSBP3-AS1Q7Z2R9 100 aa1.41□□□□□ -2.18
PRPF39-207ENST00000554439 H0YAA0 97 aa1.4□□□□□ -2.19
PRPF39-207ENST00000554439 Q6ZSA8 131 aa1.4□□□□□ -2.19
PRPF39-207ENST00000554439 C1orf134Q5TEV5 83 aa1.4□□□□□ -2.19
PRPF39-207ENST00000554439 LY6G6CO95867 125 aa1.39□□□□□ -2.19
PRPF39-207ENST00000554439 KRTAP1-4P0C5Y4 121 aa1.39□□□□□ -2.19
PRPF39-207ENST00000554439 CRIPTQ9P021 101 aa1.39□□□□□ -2.19
PRPF39-207ENST00000554439 A8MUU9 505 aa1.38□□□□□ -2.19
PRPF39-207ENST00000554439 MT3P25713 68 aa1.38□□□□□ -2.19
PRPF39-207ENST00000554439 KRTAP10-1P60331 282 aa1.38□□□□□ -2.19
PRPF39-207ENST00000554439 LINC00304Q8N9R0 145 aa1.38□□□□□ -2.19
PRPF39-207ENST00000554439 DNHD1Q96M86 4753 aa1.38□□□□□ -2.19
PRPF39-207ENST00000554439 LCE1FQ5T754 118 aa1.38□□□□□ -2.19
PRPF39-207ENST00000554439 C9orf92A6NGG3 77 aa1.38□□□□□ -2.19
PRPF39-207ENST00000554439 CAMK2N1Q7Z7J9 78 aa1.38□□□□□ -2.19
PRPF39-207ENST00000554439 DMBT1Q9UGM3 2413 aaPredicted RBP1.37□□□□□ -2.19
PRPF39-207ENST00000554439 AHNAK2Q8IVF2 5795 aa1.37□□□□□ -2.19
PRPF39-207ENST00000554439 KRTAP25-1Q3LHN0 102 aa1.37□□□□□ -2.19
PRPF39-207ENST00000554439 FAT1Q14517 4588 aa1.37□□□□□ -2.19
PRPF39-207ENST00000554439 A0A1B0GU33 70 aa1.37□□□□□ -2.19
PRPF39-207ENST00000554439 PKHD1L1Q86WI1 4243 aa1.36□□□□□ -2.19
PRPF39-207ENST00000554439 ROMO1P60602 79 aa1.36□□□□□ -2.19
PRPF39-207ENST00000554439 SACSQ9NZJ4 4579 aa1.36□□□□□ -2.19
PRPF39-207ENST00000554439 H1FX-AS1Q4G0G2 97 aa1.35□□□□□ -2.19
PRPF39-207ENST00000554439 HSPG2P98160 4391 aa1.35□□□□□ -2.19
PRPF39-207ENST00000554439 SMR3BP02814 79 aaPredicted RBP1.34□□□□□ -2.19
PRPF39-207ENST00000554439 P0C880 135 aa1.34□□□□□ -2.19
PRPF39-207ENST00000554439 COX6B2Q6YFQ2 88 aa1.34□□□□□ -2.19
PRPF39-207ENST00000554439 DYNC1H1Q14204 4646 aaKnown RBP1.34□□□□□ -2.2
PRPF39-207ENST00000554439 MYCBP2O75592 4640 aa1.34□□□□□ -2.2
PRPF39-207ENST00000554439 A0A0D9SG42 100 aa1.33□□□□□ -2.2
PRPF39-207ENST00000554439 KRTAP13-4Q3LI77 160 aa1.33□□□□□ -2.2
PRPF39-207ENST00000554439 C20orf166-AS1Q96NR2 134 aa1.33□□□□□ -2.2
PRPF39-207ENST00000554439 APOBP04114 4563 aaKnown RBP1.33□□□□□ -2.2
PRPF39-207ENST00000554439 LRP1Q07954 4544 aaKnown RBP1.33□□□□□ -2.2
PRPF39-207ENST00000554439 LPAP08519 4548 aa1.32□□□□□ -2.2
PRPF39-207ENST00000554439 OBSCNQ5VST9 7968 aa1.32□□□□□ -2.2
PRPF39-207ENST00000554439 TPRXLQ17RH7 258 aa1.32□□□□□ -2.2
PRPF39-207ENST00000554439 C10orf95Q9H7T3 257 aa1.32□□□□□ -2.2
PRPF39-207ENST00000554439 TNXBP22105 4242 aa1.31□□□□□ -2.2
PRPF39-207ENST00000554439 K7ERS5 55 aa1.31□□□□□ -2.2
PRPF39-207ENST00000554439 KRTAP10-12P60413 245 aa1.31□□□□□ -2.2
PRPF39-207ENST00000554439 RPS29P62273 56 aaKnown RBP1.3□□□□□ -2.2
PRPF39-207ENST00000554439 FAT3Q8TDW7 4589 aa1.3□□□□□ -2.2
PRPF39-207ENST00000554439 KRTAP10-8P60410 259 aa1.3□□□□□ -2.2
PRPF39-207ENST00000554439 RPL37P61927 97 aaKnown RBP1.3□□□□□ -2.2
PRPF39-207ENST00000554439 SPINT4Q6UDR6 99 aa1.3□□□□□ -2.2
PRPF39-207ENST00000554439 KRTAP10-4P60372 401 aaPredicted RBP1.29□□□□□ -2.2
PRPF39-207ENST00000554439 KRTAP12-2P59991 146 aa1.29□□□□□ -2.2
PRPF39-207ENST00000554439 KRTAP5-5Q701N2 237 aaPredicted RBP1.29□□□□□ -2.2
PRPF39-207ENST00000554439 CRCT1Q9UGL9 99 aa1.29□□□□□ -2.2
PRPF39-207ENST00000554439 S4R3F8 94 aa1.28□□□□□ -2.2
PRPF39-207ENST00000554439 KMT2CQ8NEZ4 4911 aaKnown RBP1.27□□□□□ -2.21
PRPF39-207ENST00000554439 LUZP6Q538Z0 58 aa1.27□□□□□ -2.21
PRPF39-207ENST00000554439 LRP2P98164 4655 aa1.26□□□□□ -2.21
PRPF39-207ENST00000554439 KRTAP12-1P59990 96 aa1.26□□□□□ -2.21
PRPF39-207ENST00000554439 LCE3CQ5T5A8 94 aa1.26□□□□□ -2.21
PRPF39-207ENST00000554439 A0A1B0GVY2 172 aa1.25□□□□□ -2.21
PRPF39-207ENST00000554439 RYR2Q92736 4967 aa1.23□□□□□ -2.21
PRPF39-207ENST00000554439 RYR1P21817 5038 aa1.23□□□□□ -2.21
PRPF39-207ENST00000554439 NEBP20929 6669 aa1.22□□□□□ -2.21
PRPF39-207ENST00000554439 ABCA13Q86UQ4 5058 aa1.21□□□□□ -2.22
PRPF39-207ENST00000554439 Q5VSD8 79 aa1.21□□□□□ -2.22
PRPF39-207ENST00000554439 M0QZ58 72 aa1.2□□□□□ -2.22
PRPF39-207ENST00000554439 RYR3Q15413 4870 aa1.2□□□□□ -2.22
PRPF39-207ENST00000554439 KIAA1109Q2LD37 5005 aa1.19□□□□□ -2.22
PRPF39-207ENST00000554439 MT1HL1P0DM35 61 aa1.19□□□□□ -2.22
PRPF39-207ENST00000554439 LCE3AQ5TA76 89 aa1.19□□□□□ -2.22
PRPF39-207ENST00000554439 R4GN34 69 aa1.19□□□□□ -2.22
PRPF39-207ENST00000554439 MUC17Q685J3 4493 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms