RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 C14orf132Q9NPU4 83 aa3.17□□□□□ -1.9
SMARCE1P3-201ENST00000553649 IGKV2-28A0A075B6P5 120 aa3.16□□□□□ -1.9
SMARCE1P3-201ENST00000553649 IGKV2D-28P01615 120 aa3.16□□□□□ -1.9
SMARCE1P3-201ENST00000553649 TSPEAR-AS2P59090 65 aa3.16□□□□□ -1.9
SMARCE1P3-201ENST00000553649 ORMDL1Q9P0S3 153 aa3.16□□□□□ -1.9
SMARCE1P3-201ENST00000553649 BPY2O14599 106 aa3.15□□□□□ -1.91
SMARCE1P3-201ENST00000553649 MOBPQ13875 183 aa3.15□□□□□ -1.91
SMARCE1P3-201ENST00000553649 Q8IZM0 81 aa3.15□□□□□ -1.91
SMARCE1P3-201ENST00000553649 LOC110117498A0A087WWA1 95 aa3.14□□□□□ -1.91
SMARCE1P3-201ENST00000553649 KRTAP13-1Q8IUC0 172 aa3.14□□□□□ -1.91
SMARCE1P3-201ENST00000553649 Q9BRP9 147 aa3.14□□□□□ -1.91
SMARCE1P3-201ENST00000553649 CDKN2A-AS1Q9UH64 79 aa3.14□□□□□ -1.91
SMARCE1P3-201ENST00000553649 FLGP20930 4061 aaPredicted RBP3.14□□□□□ -1.91
SMARCE1P3-201ENST00000553649 ZNF625Q96I27 306 aaPredicted RBP3.13□□□□□ -1.91
SMARCE1P3-201ENST00000553649 PRR15LQ9BU68 103 aa3.13□□□□□ -1.91
SMARCE1P3-201ENST00000553649 HIGD2AQ9BW72 106 aa3.13□□□□□ -1.91
SMARCE1P3-201ENST00000553649 DHRS4-AS1Q9P1J3 65 aa3.13□□□□□ -1.91
SMARCE1P3-201ENST00000553649 KRTAP13-3Q3SY46 172 aa3.12□□□□□ -1.91
SMARCE1P3-201ENST00000553649 SPANXA2-OT1Q8N9U9 137 aa3.12□□□□□ -1.91
SMARCE1P3-201ENST00000553649 LINC00308Q8TCZ7 52 aa3.12□□□□□ -1.91
SMARCE1P3-201ENST00000553649 COX7B2Q8TF08 81 aa3.12□□□□□ -1.91
SMARCE1P3-201ENST00000553649 KRTAP4-16G5E9R7 235 aaPredicted RBP3.11□□□□□ -1.91
SMARCE1P3-201ENST00000553649 SPAG11AQ6PDA7 123 aa3.11□□□□□ -1.91
SMARCE1P3-201ENST00000553649 MIR7-3HGQ8N6C7 128 aa3.11□□□□□ -1.91
SMARCE1P3-201ENST00000553649 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
SMARCE1P3-201ENST00000553649 ZCCHC13Q8WW36 166 aaKnown RBP3.1□□□□□ -1.91
SMARCE1P3-201ENST00000553649 SND1-IT1Q9HBX3 110 aa3.1□□□□□ -1.91
SMARCE1P3-201ENST00000553649 KRTAP16-1A8MUX0 517 aa3.09□□□□□ -1.91
SMARCE1P3-201ENST00000553649 NCR3O14931 201 aa3.09□□□□□ -1.91
SMARCE1P3-201ENST00000553649 LINC00208Q96KT6 92 aa3.09□□□□□ -1.91
SMARCE1P3-201ENST00000553649 SPRR4Q96PI1 79 aa3.09□□□□□ -1.91
SMARCE1P3-201ENST00000553649 KMT2DO14686 5537 aa3.08□□□□□ -1.92
SMARCE1P3-201ENST00000553649 NDUFAF8A1L188 74 aa3.08□□□□□ -1.92
SMARCE1P3-201ENST00000553649 LINC01558Q9Y6Z2 57 aa3.08□□□□□ -1.92
SMARCE1P3-201ENST00000553649 A8MU10 97 aa3.07□□□□□ -1.92
SMARCE1P3-201ENST00000553649 H3BPC8 53 aa3.07□□□□□ -1.92
SMARCE1P3-201ENST00000553649 Q6ZQT0 140 aa3.07□□□□□ -1.92
SMARCE1P3-201ENST00000553649 Q8NDZ9 215 aa3.07□□□□□ -1.92
SMARCE1P3-201ENST00000553649 SPINK1P00995 79 aa3.06□□□□□ -1.92
SMARCE1P3-201ENST00000553649 ROMO1P60602 79 aa3.06□□□□□ -1.92
SMARCE1P3-201ENST00000553649 IGLV8-61A0A075B6I0 122 aa3.05□□□□□ -1.92
SMARCE1P3-201ENST00000553649 M0R2T5 61 aa3.05□□□□□ -1.92
SMARCE1P3-201ENST00000553649 PCOTHQ58A44 107 aa3.05□□□□□ -1.92
SMARCE1P3-201ENST00000553649 ETDCA0A1B0GVM5 59 aa3.04□□□□□ -1.92
SMARCE1P3-201ENST00000553649 LINC00158P58513 81 aa3.04□□□□□ -1.92
SMARCE1P3-201ENST00000553649 Q8N377 158 aa3.04□□□□□ -1.92
SMARCE1P3-201ENST00000553649 C9orf92A6NGG3 77 aa3.03□□□□□ -1.92
SMARCE1P3-201ENST00000553649 K7ERS5 55 aa3.03□□□□□ -1.92
SMARCE1P3-201ENST00000553649 SMIM11BQ8TCY0 68 aa3.03□□□□□ -1.92
SMARCE1P3-201ENST00000553649 COX17Q14061 63 aa3.02□□□□□ -1.93
SMARCE1P3-201ENST00000553649 MDN1Q9NU22 5596 aa3.02□□□□□ -1.93
SMARCE1P3-201ENST00000553649 A0A087WSZ3 146 aa3.01□□□□□ -1.93
SMARCE1P3-201ENST00000553649 LINC00483Q53H64 154 aa3.01□□□□□ -1.93
SMARCE1P3-201ENST00000553649 COX6B2Q6YFQ2 88 aa3.01□□□□□ -1.93
SMARCE1P3-201ENST00000553649 A0A1W2PNM2 257 aa3□□□□□ -1.93
SMARCE1P3-201ENST00000553649 H0Y9P7 68 aa3□□□□□ -1.93
SMARCE1P3-201ENST00000553649 IGKV4-1P06312 121 aa3□□□□□ -1.93
SMARCE1P3-201ENST00000553649 RPS29P62273 56 aaKnown RBP3□□□□□ -1.93
SMARCE1P3-201ENST00000553649 MIR22HGQ0VDD5 57 aa3□□□□□ -1.93
SMARCE1P3-201ENST00000553649 SSBP3-AS1Q7Z2R9 100 aa3□□□□□ -1.93
SMARCE1P3-201ENST00000553649 KCNQ1DNQ9H478 68 aa3□□□□□ -1.93
SMARCE1P3-201ENST00000553649 SPRR1AP35321 89 aa2.99□□□□□ -1.93
SMARCE1P3-201ENST00000553649 KRTAP19-6Q3LI70 58 aa2.98□□□□□ -1.93
SMARCE1P3-201ENST00000553649 CSAG1Q6PB30 78 aa2.98□□□□□ -1.93
SMARCE1P3-201ENST00000553649 COX7BP24311 80 aa2.97□□□□□ -1.93
SMARCE1P3-201ENST00000553649 ST20-AS1Q8NBB2 130 aa2.97□□□□□ -1.93
SMARCE1P3-201ENST00000553649 IGLV6-57P01721 117 aa2.96□□□□□ -1.94
SMARCE1P3-201ENST00000553649 LCE3AQ5TA76 89 aa2.96□□□□□ -1.94
SMARCE1P3-201ENST00000553649 SPATA8Q6RVD6 105 aa2.96□□□□□ -1.94
SMARCE1P3-201ENST00000553649 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.96□□□□□ -1.94
SMARCE1P3-201ENST00000553649 Q6ZRX8 168 aa2.96□□□□□ -1.94
SMARCE1P3-201ENST00000553649 COA5Q86WW8 74 aa2.96□□□□□ -1.94
SMARCE1P3-201ENST00000553649 KRTAP2-3P0C7H8 128 aa2.95□□□□□ -1.94
SMARCE1P3-201ENST00000553649 SPINK7P58062 85 aa2.95□□□□□ -1.94
SMARCE1P3-201ENST00000553649 ADM2Q7Z4H4 148 aa2.95□□□□□ -1.94
SMARCE1P3-201ENST00000553649 KRTAP2-4Q9BYR9 128 aa2.95□□□□□ -1.94
SMARCE1P3-201ENST00000553649 UQCR11O14957 56 aa2.94□□□□□ -1.94
SMARCE1P3-201ENST00000553649 LUZP6Q538Z0 58 aa2.94□□□□□ -1.94
SMARCE1P3-201ENST00000553649 LINC00575Q6W349 94 aa2.94□□□□□ -1.94
SMARCE1P3-201ENST00000553649 C8orf17Q9NRJ1 99 aa2.94□□□□□ -1.94
SMARCE1P3-201ENST00000553649 DMAC1Q96GE9 116 aa2.93□□□□□ -1.94
SMARCE1P3-201ENST00000553649 A8MWP4 228 aa2.92□□□□□ -1.94
SMARCE1P3-201ENST00000553649 RPL37P61927 97 aaKnown RBP2.92□□□□□ -1.94
SMARCE1P3-201ENST00000553649 KRTAP25-1Q3LHN0 102 aa2.92□□□□□ -1.94
SMARCE1P3-201ENST00000553649 DEFB105AQ8NG35 78 aa2.92□□□□□ -1.94
SMARCE1P3-201ENST00000553649 CAMK2N1Q7Z7J9 78 aa2.91□□□□□ -1.94
SMARCE1P3-201ENST00000553649 C20orf166-AS1Q96NR2 134 aa2.91□□□□□ -1.94
SMARCE1P3-201ENST00000553649 A0A0G2JQZ4 141 aa2.9□□□□□ -1.95
SMARCE1P3-201ENST00000553649 MT2AP02795 61 aa2.88□□□□□ -1.95
SMARCE1P3-201ENST00000553649 P0C880 135 aa2.88□□□□□ -1.95
SMARCE1P3-201ENST00000553649 SPRR1BP22528 89 aa2.88□□□□□ -1.95
SMARCE1P3-201ENST00000553649 Q6ZQY7 126 aa2.88□□□□□ -1.95
SMARCE1P3-201ENST00000553649 Q8N9L7 120 aa2.86□□□□□ -1.95
SMARCE1P3-201ENST00000553649 MT1FP04733 61 aa2.85□□□□□ -1.95
SMARCE1P3-201ENST00000553649 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
SMARCE1P3-201ENST00000553649 IGLV5-48A0A075B6I7 105 aa2.82□□□□□ -1.96
SMARCE1P3-201ENST00000553649 A0A1B0GU69 56 aa2.82□□□□□ -1.96
SMARCE1P3-201ENST00000553649 Q5W150 140 aa2.82□□□□□ -1.96
SMARCE1P3-201ENST00000553649 KRTAP2-1Q9BYU5 128 aa2.82□□□□□ -1.96
SMARCE1P3-201ENST00000553649 TP53AIP1Q9HCN2 124 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 201 ms