RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 LOC110117498A0A087WWA1 95 aa5.52□□□□□ -1.53
PRPF39-204ENST00000553605 K7ERJ3 54 aa5.51□□□□□ -1.53
PRPF39-204ENST00000553605 CXCL6P80162 114 aa5.51□□□□□ -1.53
PRPF39-204ENST00000553605 JMJD7-PLA2G4BH0Y9G9 81 aa5.5□□□□□ -1.53
PRPF39-204ENST00000553605 KRTAP10-7P60409 375 aaPredicted RBP5.5□□□□□ -1.53
PRPF39-204ENST00000553605 PDE6GP18545 87 aa5.49□□□□□ -1.53
PRPF39-204ENST00000553605 SCGB1C2P0DMR2 95 aa5.48□□□□□ -1.53
PRPF39-204ENST00000553605 KRTAP10-12P60413 245 aa5.48□□□□□ -1.53
PRPF39-204ENST00000553605 CASC2Q6XLA1 102 aa5.48□□□□□ -1.53
PRPF39-204ENST00000553605 HMCN1Q96RW7 5635 aa5.47□□□□□ -1.53
PRPF39-204ENST00000553605 PAM16Q9Y3D7 125 aa5.47□□□□□ -1.53
PRPF39-204ENST00000553605 H0YAA0 97 aa5.46□□□□□ -1.54
PRPF39-204ENST00000553605 SPATA45Q537H7 98 aa5.46□□□□□ -1.54
PRPF39-204ENST00000553605 KRTAP5-10Q6L8G5 202 aa5.46□□□□□ -1.54
PRPF39-204ENST00000553605 A0A087WVE0 104 aa5.45□□□□□ -1.54
PRPF39-204ENST00000553605 AHNAK2Q8IVF2 5795 aa5.44□□□□□ -1.54
PRPF39-204ENST00000553605 C14orf132Q9NPU4 83 aa5.43□□□□□ -1.54
PRPF39-204ENST00000553605 BPY2O14599 106 aa5.41□□□□□ -1.54
PRPF39-204ENST00000553605 ADM2Q7Z4H4 148 aa5.4□□□□□ -1.54
PRPF39-204ENST00000553605 MT4P47944 62 aa5.39□□□□□ -1.55
PRPF39-204ENST00000553605 Q8N9L7 120 aa5.38□□□□□ -1.55
PRPF39-204ENST00000553605 HSD52Q0P140 79 aa5.37□□□□□ -1.55
PRPF39-204ENST00000553605 VAMP8Q9BV40 100 aa5.37□□□□□ -1.55
PRPF39-204ENST00000553605 NDUFC1O43677 76 aa5.34□□□□□ -1.55
PRPF39-204ENST00000553605 S100A6P06703 90 aa5.34□□□□□ -1.55
PRPF39-204ENST00000553605 ATXN8Q156A1 80 aa5.34□□□□□ -1.55
PRPF39-204ENST00000553605 KRTAP5-7Q6L8G8 165 aa5.34□□□□□ -1.55
PRPF39-204ENST00000553605 R4GN34 69 aa5.32□□□□□ -1.56
PRPF39-204ENST00000553605 S100A1P23297 94 aa5.27□□□□□ -1.57
PRPF39-204ENST00000553605 KRTAP19-3Q7Z4W3 81 aa5.25□□□□□ -1.57
PRPF39-204ENST00000553605 M0QZ58 72 aa5.24□□□□□ -1.57
PRPF39-204ENST00000553605 CYP4F30PQ9H0H9 118 aa5.24□□□□□ -1.57
PRPF39-204ENST00000553605 LINC01554Q52M75 96 aa5.22□□□□□ -1.57
PRPF39-204ENST00000553605 TP53AIP1Q9HCN2 124 aa5.21□□□□□ -1.58
PRPF39-204ENST00000553605 SPRR5A0A1B0GTR4 108 aa5.2□□□□□ -1.58
PRPF39-204ENST00000553605 CYSTM1Q9H1C7 97 aa5.2□□□□□ -1.58
PRPF39-204ENST00000553605 KRTAP5-3Q6L8H2 238 aa5.19□□□□□ -1.58
PRPF39-204ENST00000553605 K7EP34 96 aa5.18□□□□□ -1.58
PRPF39-204ENST00000553605 P0C880 135 aa5.18□□□□□ -1.58
PRPF39-204ENST00000553605 KRTAP19-7Q3SYF9 63 aa5.17□□□□□ -1.58
PRPF39-204ENST00000553605 MT1EP04732 61 aa5.15□□□□□ -1.59
PRPF39-204ENST00000553605 C20orf197Q8N268 126 aa5.15□□□□□ -1.59
PRPF39-204ENST00000553605 NAA38Q9BRA0 125 aaKnown RBP5.15□□□□□ -1.59
PRPF39-204ENST00000553605 C9orf118A6NHY6 69 aa5.13□□□□□ -1.59
PRPF39-204ENST00000553605 KRTAP5-4Q6L8H1 288 aa5.11□□□□□ -1.59
PRPF39-204ENST00000553605 ACYP1P07311 99 aa5.1□□□□□ -1.59
PRPF39-204ENST00000553605 SVIPQ8NHG7 77 aa5.1□□□□□ -1.59
PRPF39-204ENST00000553605 UQCR10Q9UDW1 63 aa5.08□□□□□ -1.6
PRPF39-204ENST00000553605 LOC101927531A0A1B0GV80 90 aa5.07□□□□□ -1.6
PRPF39-204ENST00000553605 TRAV22A0A0B4J277 110 aa5.06□□□□□ -1.6
PRPF39-204ENST00000553605 MT1GP13640 62 aa5.06□□□□□ -1.6
PRPF39-204ENST00000553605 TSTD3H0UI37 97 aa5.04□□□□□ -1.6
PRPF39-204ENST00000553605 BATFQ16520 125 aa5.03□□□□□ -1.6
PRPF39-204ENST00000553605 PP632Q6XCG6 107 aa5.02□□□□□ -1.61
PRPF39-204ENST00000553605 H3BT86 120 aa5.01□□□□□ -1.61
PRPF39-204ENST00000553605 UBL5Q9BZL1 73 aa5.01□□□□□ -1.61
PRPF39-204ENST00000553605 PYY3Q5JQD4 70 aa4.99□□□□□ -1.61
PRPF39-204ENST00000553605 MT-ATP8P03928 68 aa4.96□□□□□ -1.62
PRPF39-204ENST00000553605 MT1MQ8N339 61 aa4.96□□□□□ -1.62
PRPF39-204ENST00000553605 SPCS1Q9Y6A9 102 aa4.92□□□□□ -1.62
PRPF39-204ENST00000553605 M0R143 59 aa4.91□□□□□ -1.62
PRPF39-204ENST00000553605 A0A1W2PPM0 123 aa4.88□□□□□ -1.63
PRPF39-204ENST00000553605 KRTAP4-3Q9BYR4 195 aa4.88□□□□□ -1.63
PRPF39-204ENST00000553605 KRTAP20-2Q3LI61 65 aa4.87□□□□□ -1.63
PRPF39-204ENST00000553605 KRTAP19-5Q3LI72 72 aa4.87□□□□□ -1.63
PRPF39-204ENST00000553605 H0Y9P7 68 aa4.85□□□□□ -1.63
PRPF39-204ENST00000553605 ATOX1O00244 68 aa4.85□□□□□ -1.63
PRPF39-204ENST00000553605 MT1LQ93083 61 aa4.81□□□□□ -1.64
PRPF39-204ENST00000553605 UQCRQO14949 82 aa4.8□□□□□ -1.64
PRPF39-204ENST00000553605 CAMK2N1Q7Z7J9 78 aa4.79□□□□□ -1.64
PRPF39-204ENST00000553605 A0A0D9SG42 100 aa4.76□□□□□ -1.65
PRPF39-204ENST00000553605 KRTAP23-1A1A580 65 aa4.76□□□□□ -1.65
PRPF39-204ENST00000553605 TAX1BP3O14907 124 aa4.74□□□□□ -1.65
PRPF39-204ENST00000553605 LINC00208Q96KT6 92 aa4.72□□□□□ -1.65
PRPF39-204ENST00000553605 KRTAP12-4P60329 112 aa4.67□□□□□ -1.66
PRPF39-204ENST00000553605 KRTAP15-1Q3LI76 137 aa4.66□□□□□ -1.66
PRPF39-204ENST00000553605 AHNAKQ09666 5890 aaKnown RBP4.66□□□□□ -1.66
PRPF39-204ENST00000553605 DMAC1Q96GE9 116 aa4.65□□□□□ -1.67
PRPF39-204ENST00000553605 MUC5ACP98088 5654 aa4.63□□□□□ -1.67
PRPF39-204ENST00000553605 KRTAP5-5Q701N2 237 aaPredicted RBP4.6□□□□□ -1.67
PRPF39-204ENST00000553605 MP68P56378 58 aa4.58□□□□□ -1.68
PRPF39-204ENST00000553605 PRO0461Q9UI25 63 aa4.58□□□□□ -1.68
PRPF39-204ENST00000553605 MUC5BQ9HC84 5762 aaPredicted RBP4.57□□□□□ -1.68
PRPF39-204ENST00000553605 HIST1H4AP62805 103 aaKnown RBP4.56□□□□□ -1.68
PRPF39-204ENST00000553605 KRTAP13-4Q3LI77 160 aa4.56□□□□□ -1.68
PRPF39-204ENST00000553605 TRAV7A0A075B6U4 112 aa4.54□□□□□ -1.68
PRPF39-204ENST00000553605 KRTAP5-8O75690 187 aa4.51□□□□□ -1.69
PRPF39-204ENST00000553605 SPTSSBQ8NFR3 76 aa4.51□□□□□ -1.69
PRPF39-204ENST00000553605 C10orf95Q9H7T3 257 aa4.51□□□□□ -1.69
PRPF39-204ENST00000553605 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
PRPF39-204ENST00000553605 OCR1Q9BZK8 76 aa4.45□□□□□ -1.7
PRPF39-204ENST00000553605 ACYP2P14621 99 aa4.44□□□□□ -1.7
PRPF39-204ENST00000553605 ATP5EP2Q5VTU8 51 aa4.44□□□□□ -1.7
PRPF39-204ENST00000553605 PCP4P48539 62 aa4.43□□□□□ -1.7
PRPF39-204ENST00000553605 LCE3AQ5TA76 89 aa4.43□□□□□ -1.7
PRPF39-204ENST00000553605 H3BPC8 53 aa4.41□□□□□ -1.7
PRPF39-204ENST00000553605 ETDBQ3ZM63 59 aa4.39□□□□□ -1.71
PRPF39-204ENST00000553605 SPINT4Q6UDR6 99 aa4.35□□□□□ -1.71
PRPF39-204ENST00000553605 KRTAP5-2Q701N4 177 aa4.35□□□□□ -1.71
PRPF39-204ENST00000553605 CHKB-CPT1BH3BT56 60 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms