RNA–Protein interactions for RNA: ENST00000552888.1

NUBPL-213, Transcript of nucleotide binding protein like, humanhuman

TSL 2

Gene NUBPL, Length 5,032 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUBPL-213ENST00000552888 KRTAP3-2Q9BYR7 98 aa4.54□□□□□ -1.68
NUBPL-213ENST00000552888 LYSTQ99698 3801 aa4.54□□□□□ -1.68
NUBPL-213ENST00000552888 PLECQ15149 4684 aaKnown RBP4.53□□□□□ -1.68
NUBPL-213ENST00000552888 KRTAP3-3Q9BYR6 98 aa4.53□□□□□ -1.68
NUBPL-213ENST00000552888 KRTAP23-1A1A580 65 aa4.52□□□□□ -1.69
NUBPL-213ENST00000552888 DNAH17Q9UFH2 4485 aa4.52□□□□□ -1.69
NUBPL-213ENST00000552888 MEGF8Q7Z7M0 2845 aa4.52□□□□□ -1.69
NUBPL-213ENST00000552888 DNAH7Q8WXX0 4024 aa4.5□□□□□ -1.69
NUBPL-213ENST00000552888 DNAH11Q96DT5 4516 aa4.46□□□□□ -1.69
NUBPL-213ENST00000552888 DNAH8Q96JB1 4490 aa4.46□□□□□ -1.7
NUBPL-213ENST00000552888 DNAH2Q9P225 4427 aa4.43□□□□□ -1.7
NUBPL-213ENST00000552888 STARD9Q9P2P6 4700 aa4.4□□□□□ -1.7
NUBPL-213ENST00000552888 KRTAP15-1Q3LI76 137 aa4.4□□□□□ -1.7
NUBPL-213ENST00000552888 PRKDCP78527 4128 aaKnown RBP4.4□□□□□ -1.71
NUBPL-213ENST00000552888 DYNC1H1Q14204 4646 aaKnown RBP4.36□□□□□ -1.71
NUBPL-213ENST00000552888 INE1O15225 51 aa4.34□□□□□ -1.71
NUBPL-213ENST00000552888 KRTAP10-12P60413 245 aa4.32□□□□□ -1.72
NUBPL-213ENST00000552888 DNHD1Q96M86 4753 aa4.31□□□□□ -1.72
NUBPL-213ENST00000552888 FAT2Q9NYQ8 4349 aa4.3□□□□□ -1.72
NUBPL-213ENST00000552888 SRRM2Q9UQ35 2752 aaKnown RBP4.29□□□□□ -1.72
NUBPL-213ENST00000552888 DNAH5Q8TE73 4624 aa4.28□□□□□ -1.72
NUBPL-213ENST00000552888 SACSQ9NZJ4 4579 aa4.25□□□□□ -1.73
NUBPL-213ENST00000552888 COL7A1Q02388 2944 aa4.25□□□□□ -1.73
NUBPL-213ENST00000552888 KRTAP4-5Q9BYR2 181 aa4.24□□□□□ -1.73
NUBPL-213ENST00000552888 RYR2Q92736 4967 aa4.22□□□□□ -1.73
NUBPL-213ENST00000552888 LRP1BQ9NZR2 4599 aa4.22□□□□□ -1.73
NUBPL-213ENST00000552888 PKHD1L1Q86WI1 4243 aa4.21□□□□□ -1.74
NUBPL-213ENST00000552888 HECTD4Q9Y4D8 3996 aa4.21□□□□□ -1.74
NUBPL-213ENST00000552888 KRTAP12-3P60328 96 aa4.2□□□□□ -1.74
NUBPL-213ENST00000552888 FRAS1Q86XX4 4008 aa4.17□□□□□ -1.74
NUBPL-213ENST00000552888 KMT2AQ03164 3969 aa4.15□□□□□ -1.74
NUBPL-213ENST00000552888 VPS13BQ7Z7G8 4022 aa4.14□□□□□ -1.75
NUBPL-213ENST00000552888 APOBP04114 4563 aaKnown RBP4.13□□□□□ -1.75
NUBPL-213ENST00000552888 LCE3AQ5TA76 89 aa4.11□□□□□ -1.75
NUBPL-213ENST00000552888 PKD1P98161 4303 aa4.1□□□□□ -1.75
NUBPL-213ENST00000552888 RYR1P21817 5038 aa4.09□□□□□ -1.75
NUBPL-213ENST00000552888 LORP23490 312 aaPredicted RBP4.09□□□□□ -1.75
NUBPL-213ENST00000552888 SPRR2GQ9BYE4 73 aa4.06□□□□□ -1.76
NUBPL-213ENST00000552888 KRTAP19-4Q3LI73 84 aa4.06□□□□□ -1.76
NUBPL-213ENST00000552888 BIRC6Q9NR09 4857 aa4.03□□□□□ -1.76
NUBPL-213ENST00000552888 FAT1Q14517 4588 aa4.02□□□□□ -1.77
NUBPL-213ENST00000552888 PKHD1P08F94 4074 aa4.02□□□□□ -1.77
NUBPL-213ENST00000552888 HYDINQ4G0P3 5121 aa4□□□□□ -1.77
NUBPL-213ENST00000552888 KRTAP4-1Q9BYQ7 146 aa4□□□□□ -1.77
NUBPL-213ENST00000552888 MT1HP80294 61 aa3.99□□□□□ -1.77
NUBPL-213ENST00000552888 HSPG2P98160 4391 aa3.98□□□□□ -1.77
NUBPL-213ENST00000552888 MT2AP02795 61 aa3.95□□□□□ -1.78
NUBPL-213ENST00000552888 TNXBP22105 4242 aa3.94□□□□□ -1.78
NUBPL-213ENST00000552888 RYR3Q15413 4870 aa3.93□□□□□ -1.78
NUBPL-213ENST00000552888 KRTAP17-1Q9BYP8 105 aa3.92□□□□□ -1.78
NUBPL-213ENST00000552888 FAT3Q8TDW7 4589 aa3.92□□□□□ -1.78
NUBPL-213ENST00000552888 KRTAP8-1Q8IUC2 63 aa3.91□□□□□ -1.78
NUBPL-213ENST00000552888 HERC1Q15751 4861 aa3.87□□□□□ -1.79
NUBPL-213ENST00000552888 MUC17Q685J3 4493 aa3.86□□□□□ -1.79
NUBPL-213ENST00000552888 HERC2O95714 4834 aa3.84□□□□□ -1.79
NUBPL-213ENST00000552888 MYCBP2O75592 4640 aa3.84□□□□□ -1.79
NUBPL-213ENST00000552888 MT1FP04733 61 aa3.83□□□□□ -1.8
NUBPL-213ENST00000552888 KRTAP19-8Q3LI54 63 aa3.83□□□□□ -1.8
NUBPL-213ENST00000552888 CRCT1Q9UGL9 99 aa3.81□□□□□ -1.8
NUBPL-213ENST00000552888 KIAA1109Q2LD37 5005 aa3.8□□□□□ -1.8
NUBPL-213ENST00000552888 KMT2CQ8NEZ4 4911 aaKnown RBP3.79□□□□□ -1.8
NUBPL-213ENST00000552888 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
NUBPL-213ENST00000552888 KRTAP19-1Q8IUB9 90 aa3.71□□□□□ -1.82
NUBPL-213ENST00000552888 KRTAP19-5Q3LI72 72 aa3.7□□□□□ -1.82
NUBPL-213ENST00000552888 KRTAP10-5P60370 271 aa3.68□□□□□ -1.82
NUBPL-213ENST00000552888 LRP1Q07954 4544 aaKnown RBP3.67□□□□□ -1.82
NUBPL-213ENST00000552888 EPPK1P58107 5090 aaKnown RBP3.65□□□□□ -1.82
NUBPL-213ENST00000552888 KRTAP10-7P60409 375 aaPredicted RBP3.62□□□□□ -1.83
NUBPL-213ENST00000552888 SPRR5A0A1B0GTR4 108 aa3.6□□□□□ -1.83
NUBPL-213ENST00000552888 LCE2CQ5TA81 110 aa3.6□□□□□ -1.83
NUBPL-213ENST00000552888 MT1XP80297 61 aa3.59□□□□□ -1.84
NUBPL-213ENST00000552888 KRTAP19-2Q3LHN2 52 aa3.58□□□□□ -1.84
NUBPL-213ENST00000552888 PCLOQ9Y6V0 5065 aa3.57□□□□□ -1.84
NUBPL-213ENST00000552888 MT1BP07438 61 aa3.57□□□□□ -1.84
NUBPL-213ENST00000552888 ABCA13Q86UQ4 5058 aa3.57□□□□□ -1.84
NUBPL-213ENST00000552888 SPRR2FQ96RM1 72 aa3.56□□□□□ -1.84
NUBPL-213ENST00000552888 KRTAP9-8Q9BYQ0 159 aa3.56□□□□□ -1.84
NUBPL-213ENST00000552888 KRTAP9-3Q9BYQ3 159 aa3.5□□□□□ -1.85
NUBPL-213ENST00000552888 FLGP20930 4061 aaPredicted RBP3.48□□□□□ -1.85
NUBPL-213ENST00000552888 MT1GP13640 62 aa3.45□□□□□ -1.86
NUBPL-213ENST00000552888 HMCN2Q8NDA2 5059 aa3.42□□□□□ -1.86
NUBPL-213ENST00000552888 LCE2AQ5TA79 106 aaPredicted RBP3.41□□□□□ -1.86
NUBPL-213ENST00000552888 LCE2DQ5TA82 110 aaPredicted RBP3.39□□□□□ -1.87
NUBPL-213ENST00000552888 LRP2P98164 4655 aa3.39□□□□□ -1.87
NUBPL-213ENST00000552888 LPAP08519 4548 aa3.37□□□□□ -1.87
NUBPL-213ENST00000552888 SPRR2EP22531 72 aa3.35□□□□□ -1.87
NUBPL-213ENST00000552888 SPRR2BP35325 72 aa3.35□□□□□ -1.87
NUBPL-213ENST00000552888 SPRR2AP35326 72 aa3.35□□□□□ -1.87
NUBPL-213ENST00000552888 MT1LQ93083 61 aa3.31□□□□□ -1.88
NUBPL-213ENST00000552888 LCE2BO14633 110 aa3.3□□□□□ -1.88
NUBPL-213ENST00000552888 KRTAP19-3Q7Z4W3 81 aa3.29□□□□□ -1.88
NUBPL-213ENST00000552888 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
NUBPL-213ENST00000552888 RNF213Q63HN8 5207 aa3.28□□□□□ -1.88
NUBPL-213ENST00000552888 SPRR2DP22532 72 aa3.26□□□□□ -1.89
NUBPL-213ENST00000552888 MT1EP04732 61 aa3.25□□□□□ -1.89
NUBPL-213ENST00000552888 KRTAP19-6Q3LI70 58 aa3.25□□□□□ -1.89
NUBPL-213ENST00000552888 KRTAP4-8A0A0G2JLE6 195 aa3.24□□□□□ -1.89
NUBPL-213ENST00000552888 KRTAP4-8Q9BYQ9 185 aa3.24□□□□□ -1.89
NUBPL-213ENST00000552888 LCE3BQ5TA77 95 aa3.22□□□□□ -1.89
NUBPL-213ENST00000552888 LCE3DQ9BYE3 92 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms