RNA–Protein interactions for RNA: ENST00000550662.1

NPAS3-208, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-208ENST00000550662 MT1LQ93083 61 aa-0.87□□□□□ -2.55
NPAS3-208ENST00000550662 KCNQ1DNQ9H478 68 aa-0.87□□□□□ -2.55
NPAS3-208ENST00000550662 CDH23Q9H251 3354 aa-0.87□□□□□ -2.55
NPAS3-208ENST00000550662 ARHGAP35Q9NRY4 1499 aa-0.87□□□□□ -2.55
NPAS3-208ENST00000550662 IGLV5-48A0A075B6I7 105 aa-0.88□□□□□ -2.55
NPAS3-208ENST00000550662 CRIP1P50238 77 aa-0.88□□□□□ -2.55
NPAS3-208ENST00000550662 MED14O60244 1454 aa-0.88□□□□□ -2.55
NPAS3-208ENST00000550662 RALGAPBQ86X10 1494 aa-0.88□□□□□ -2.55
NPAS3-208ENST00000550662 LY75O60449 1722 aa-0.89□□□□□ -2.55
NPAS3-208ENST00000550662 A0A087WXM4 84 aa-0.89□□□□□ -2.55
NPAS3-208ENST00000550662 SMIM13P0DJ93 91 aa-0.89□□□□□ -2.55
NPAS3-208ENST00000550662 RPS27P42677 84 aaKnown RBP-0.89□□□□□ -2.55
NPAS3-208ENST00000550662 RPS27LQ71UM5 84 aaKnown RBP-0.89□□□□□ -2.55
NPAS3-208ENST00000550662 UBL5Q9BZL1 73 aa-0.89□□□□□ -2.55
NPAS3-208ENST00000550662 CFAP74Q9C0B2 1584 aa-0.89□□□□□ -2.55
NPAS3-208ENST00000550662 CDC42BPAQ5VT25 1732 aa-0.89□□□□□ -2.55
NPAS3-208ENST00000550662 LRRIQ1Q96JM4 1722 aa-0.89□□□□□ -2.55
NPAS3-208ENST00000550662 DCAF1Q9Y4B6 1507 aa-0.89□□□□□ -2.55
NPAS3-208ENST00000550662 BVES-AS1Q5T3Y7 98 aa-0.9□□□□□ -2.55
NPAS3-208ENST00000550662 UTRNP46939 3433 aa-0.91□□□□□ -2.55
NPAS3-208ENST00000550662 BRCA2P51587 3418 aa-0.91□□□□□ -2.55
NPAS3-208ENST00000550662 ST20Q9HBF5 79 aa-0.91□□□□□ -2.56
NPAS3-208ENST00000550662 ERVK-7P63135 1459 aa-0.92□□□□□ -2.56
NPAS3-208ENST00000550662 VPS13AQ96RL7 3174 aa-0.92□□□□□ -2.56
NPAS3-208ENST00000550662 ABCC1P33527 1531 aa-0.92□□□□□ -2.56
NPAS3-208ENST00000550662 H3BUA1 57 aa-0.92□□□□□ -2.56
NPAS3-208ENST00000550662 MINOS1Q5TGZ0 78 aa-0.92□□□□□ -2.56
NPAS3-208ENST00000550662 H3BUT2 72 aa-0.93□□□□□ -2.56
NPAS3-208ENST00000550662 ADIRFQ15847 76 aa-0.93□□□□□ -2.56
NPAS3-208ENST00000550662 NCBP2-AS2Q69YL0 99 aa-0.93□□□□□ -2.56
NPAS3-208ENST00000550662 NOP10Q9NPE3 64 aaKnown RBP-0.93□□□□□ -2.56
NPAS3-208ENST00000550662 GOLGB1Q14789 3259 aaKnown RBP-0.93□□□□□ -2.56
NPAS3-208ENST00000550662 RB1CC1Q8TDY2 1594 aa-0.93□□□□□ -2.56
NPAS3-208ENST00000550662 MYO5CQ9NQX4 1742 aa-0.93□□□□□ -2.56
NPAS3-208ENST00000550662 ASPMQ8IZT6 3477 aa-0.93□□□□□ -2.56
NPAS3-208ENST00000550662 CENPFP49454 3210 aa-0.93□□□□□ -2.56
NPAS3-208ENST00000550662 C3P01024 1663 aa-0.94□□□□□ -2.56
NPAS3-208ENST00000550662 LMTK2Q8IWU2 1503 aa-0.94□□□□□ -2.56
NPAS3-208ENST00000550662 ASXL1Q8IXJ9 1541 aa-0.94□□□□□ -2.56
NPAS3-208ENST00000550662 ABCA8O94911 1581 aa-0.94□□□□□ -2.56
NPAS3-208ENST00000550662 DIP2AQ14689 1571 aa-0.94□□□□□ -2.56
NPAS3-208ENST00000550662 ETDCA0A1B0GVM5 59 aa-0.94□□□□□ -2.56
NPAS3-208ENST00000550662 MAST1Q9Y2H9 1570 aa-0.95□□□□□ -2.56
NPAS3-208ENST00000550662 ENHOQ6UWT2 76 aa-0.96□□□□□ -2.56
NPAS3-208ENST00000550662 S100A13Q99584 98 aa-0.96□□□□□ -2.56
NPAS3-208ENST00000550662 C6orf48Q9UBA6 75 aa-0.96□□□□□ -2.56
NPAS3-208ENST00000550662 GNG2P59768 71 aa-0.97□□□□□ -2.56
NPAS3-208ENST00000550662 DEFB114Q30KQ6 69 aa-0.97□□□□□ -2.56
NPAS3-208ENST00000550662 KRTAP19-2Q3LHN2 52 aa-0.97□□□□□ -2.56
NPAS3-208ENST00000550662 CEP250Q9BV73 2442 aa-0.97□□□□□ -2.57
NPAS3-208ENST00000550662 ANKARQ7Z5J8 1434 aa-0.98□□□□□ -2.57
NPAS3-208ENST00000550662 CDC42BPGQ6DT37 1551 aa-0.98□□□□□ -2.57
NPAS3-208ENST00000550662 FCER1GP30273 86 aa-0.98□□□□□ -2.57
NPAS3-208ENST00000550662 C18orf32Q8TCD1 76 aa-0.98□□□□□ -2.57
NPAS3-208ENST00000550662 CLASP1Q7Z460 1538 aa-0.99□□□□□ -2.57
NPAS3-208ENST00000550662 CCDC18Q5T9S5 1454 aa-0.99□□□□□ -2.57
NPAS3-208ENST00000550662 ABCC6O95255 1503 aa-0.99□□□□□ -2.57
NPAS3-208ENST00000550662 MROH1Q8NDA8 1641 aa-1□□□□□ -2.57
NPAS3-208ENST00000550662 A0A1B0GUL6 1792 aa-1□□□□□ -2.57
NPAS3-208ENST00000550662 M0QY20 66 aa-1□□□□□ -2.57
NPAS3-208ENST00000550662 SFTA3P0C7M3 94 aa-1□□□□□ -2.57
NPAS3-208ENST00000550662 XIRP2A4UGR9 3374 aa-1□□□□□ -2.57
NPAS3-208ENST00000550662 IQGAP3Q86VI3 1631 aa-1□□□□□ -2.57
NPAS3-208ENST00000550662 M0QZ58 72 aa-1.01□□□□□ -2.57
NPAS3-208ENST00000550662 RRBP1Q9P2E9 1410 aaKnown RBP-1.01□□□□□ -2.57
NPAS3-208ENST00000550662 SMARCA2P51531 1590 aa-1.02□□□□□ -2.57
NPAS3-208ENST00000550662 DNMBPQ6XZF7 1577 aa-1.02□□□□□ -2.57
NPAS3-208ENST00000550662 ABCA9Q8IUA7 1624 aa-1.02□□□□□ -2.57
NPAS3-208ENST00000550662 LINC01546A6NGU7 62 aa-1.03□□□□□ -2.57
NPAS3-208ENST00000550662 H3BVH4 76 aa-1.03□□□□□ -2.57
NPAS3-208ENST00000550662 RPS29P62273 56 aaKnown RBP-1.03□□□□□ -2.57
NPAS3-208ENST00000550662 CROCC2H7BZ55 1655 aa-1.04□□□□□ -2.58
NPAS3-208ENST00000550662 MADDQ8WXG6 1647 aa-1.04□□□□□ -2.58
NPAS3-208ENST00000550662 A8MTW9 85 aa-1.04□□□□□ -2.58
NPAS3-208ENST00000550662 DEFB4AO15263 64 aa-1.04□□□□□ -2.58
NPAS3-208ENST00000550662 TIAM1Q13009 1591 aa-1.04□□□□□ -2.58
NPAS3-208ENST00000550662 ATXN8Q156A1 80 aa-1.06□□□□□ -2.58
NPAS3-208ENST00000550662 HILPDAQ9Y5L2 63 aa-1.06□□□□□ -2.58
NPAS3-208ENST00000550662 FAM208AQ9UK61 1670 aaKnown RBP-1.07□□□□□ -2.58
NPAS3-208ENST00000550662 GLI2P10070 1586 aa-1.07□□□□□ -2.58
NPAS3-208ENST00000550662 UGGT2Q9NYU1 1516 aa-1.09□□□□□ -2.58
NPAS3-208ENST00000550662 K7EMI3 77 aa-1.09□□□□□ -2.58
NPAS3-208ENST00000550662 SPART-AS1P0CW21 52 aa-1.1□□□□□ -2.59
NPAS3-208ENST00000550662 ABRACLQ9P1F3 81 aa-1.1□□□□□ -2.59
NPAS3-208ENST00000550662 ALS2Q96Q42 1657 aa-1.1□□□□□ -2.59
NPAS3-208ENST00000550662 PREX2Q70Z35 1606 aa-1.11□□□□□ -2.59
NPAS3-208ENST00000550662 DUOX2Q9NRD8 1548 aa-1.13□□□□□ -2.59
NPAS3-208ENST00000550662 GNG13Q9P2W3 67 aa-1.13□□□□□ -2.59
NPAS3-208ENST00000550662 KAAG1Q9UBP8 84 aa-1.13□□□□□ -2.59
NPAS3-208ENST00000550662 ABCA6Q8N139 1617 aa-1.14□□□□□ -2.59
NPAS3-208ENST00000550662 TMEM167BQ9NRX6 74 aa-1.14□□□□□ -2.59
NPAS3-208ENST00000550662 KIF21BO75037 1637 aa-1.15□□□□□ -2.59
NPAS3-208ENST00000550662 LINC01549A6NIU2 74 aa-1.15□□□□□ -2.59
NPAS3-208ENST00000550662 SMIM27A0A1W2PRY6 76 aa-1.16□□□□□ -2.6
NPAS3-208ENST00000550662 M0R1W7 72 aa-1.16□□□□□ -2.6
NPAS3-208ENST00000550662 SERF2P84101 59 aa-1.16□□□□□ -2.6
NPAS3-208ENST00000550662 LINC00308Q8TCZ7 52 aa-1.17□□□□□ -2.6
NPAS3-208ENST00000550662 IGIPA6NJ69 53 aa-1.18□□□□□ -2.6
NPAS3-208ENST00000550662 EEA1Q15075 1411 aa-1.18□□□□□ -2.6
NPAS3-208ENST00000550662 DEFB136Q30KP8 78 aa-1.19□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms