RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 F8WEM9 126 aa1.86□□□□□ -2.11
LIMA1-206ENST00000550611 ERC2-IT1O76042 136 aa1.86□□□□□ -2.11
LIMA1-206ENST00000550611 DNAL4O96015 105 aa1.86□□□□□ -2.11
LIMA1-206ENST00000550611 KRTAP2-3P0C7H8 128 aa1.86□□□□□ -2.11
LIMA1-206ENST00000550611 COX17Q14061 63 aa1.86□□□□□ -2.11
LIMA1-206ENST00000550611 SOSTDC1Q6X4U4 206 aa1.86□□□□□ -2.11
LIMA1-206ENST00000550611 KRTAP2-4Q9BYR9 128 aa1.86□□□□□ -2.11
LIMA1-206ENST00000550611 CYP4F30PQ9H0H9 118 aa1.86□□□□□ -2.11
LIMA1-206ENST00000550611 KCNQ1DNQ9H478 68 aa1.86□□□□□ -2.11
LIMA1-206ENST00000550611 LINC00846Q9NV44 126 aa1.86□□□□□ -2.11
LIMA1-206ENST00000550611 LINC01546A6NGU7 62 aa1.85□□□□□ -2.11
LIMA1-206ENST00000550611 MOBPQ13875 183 aa1.85□□□□□ -2.11
LIMA1-206ENST00000550611 ZNF625Q96I27 306 aaPredicted RBP1.85□□□□□ -2.11
LIMA1-206ENST00000550611 SCGB3A1Q96QR1 104 aa1.85□□□□□ -2.11
LIMA1-206ENST00000550611 LIMD2Q9BT23 127 aa1.85□□□□□ -2.11
LIMA1-206ENST00000550611 CYSTM1Q9H1C7 97 aa1.85□□□□□ -2.11
LIMA1-206ENST00000550611 TRAV12-1A0A0B4J245 112 aa1.84□□□□□ -2.11
LIMA1-206ENST00000550611 IGKV3D-7A0A0C4DH55 119 aa1.84□□□□□ -2.11
LIMA1-206ENST00000550611 HCG22E2RYF7 251 aa1.84□□□□□ -2.11
LIMA1-206ENST00000550611 CHKB-CPT1BH3BT56 60 aa1.84□□□□□ -2.11
LIMA1-206ENST00000550611 H7C2G1 150 aa1.84□□□□□ -2.11
LIMA1-206ENST00000550611 BAALC-AS2P0C853 105 aa1.84□□□□□ -2.11
LIMA1-206ENST00000550611 MUSTN1Q8IVN3 82 aa1.84□□□□□ -2.11
LIMA1-206ENST00000550611 Q9BRP9 147 aa1.84□□□□□ -2.11
LIMA1-206ENST00000550611 TRAV23DV6A0A075B6W5 121 aa1.83□□□□□ -2.12
LIMA1-206ENST00000550611 ETDCA0A1B0GVM5 59 aa1.83□□□□□ -2.12
LIMA1-206ENST00000550611 C9orf92A6NGG3 77 aa1.83□□□□□ -2.12
LIMA1-206ENST00000550611 A6NN06 94 aa1.83□□□□□ -2.12
LIMA1-206ENST00000550611 LEPROTO15243 131 aa1.83□□□□□ -2.12
LIMA1-206ENST00000550611 RPL37P61927 97 aaKnown RBP1.83□□□□□ -2.12
LIMA1-206ENST00000550611 KRTAP19-6Q3LI70 58 aa1.83□□□□□ -2.12
LIMA1-206ENST00000550611 COX6B2Q6YFQ2 88 aa1.83□□□□□ -2.12
LIMA1-206ENST00000550611 IGLV6-57P01721 117 aa1.82□□□□□ -2.12
LIMA1-206ENST00000550611 LINC00158P58513 81 aa1.82□□□□□ -2.12
LIMA1-206ENST00000550611 TTTY13Q9BZ97 58 aa1.82□□□□□ -2.12
LIMA1-206ENST00000550611 UBL5Q9BZL1 73 aa1.82□□□□□ -2.12
LIMA1-206ENST00000550611 A0A096LNJ9 63 aa1.81□□□□□ -2.12
LIMA1-206ENST00000550611 TRAV22A0A0B4J277 110 aa1.81□□□□□ -2.12
LIMA1-206ENST00000550611 hDV103S1A0JD37 113 aa1.81□□□□□ -2.12
LIMA1-206ENST00000550611 A6NED7 52 aa1.81□□□□□ -2.12
LIMA1-206ENST00000550611 C11orf86A6NJI1 115 aa1.81□□□□□ -2.12
LIMA1-206ENST00000550611 NCR3O14931 201 aa1.81□□□□□ -2.12
LIMA1-206ENST00000550611 MT2AP02795 61 aa1.81□□□□□ -2.12
LIMA1-206ENST00000550611 SPRR1BP22528 89 aa1.81□□□□□ -2.12
LIMA1-206ENST00000550611 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
LIMA1-206ENST00000550611 CASC2Q6XLA1 102 aa1.81□□□□□ -2.12
LIMA1-206ENST00000550611 Q6ZRX8 168 aa1.81□□□□□ -2.12
LIMA1-206ENST00000550611 Q8N9L7 120 aa1.81□□□□□ -2.12
LIMA1-206ENST00000550611 SNURFQ9Y675 71 aa1.81□□□□□ -2.12
LIMA1-206ENST00000550611 MIR7-3HGQ8N6C7 128 aa1.8□□□□□ -2.12
LIMA1-206ENST00000550611 ST20-AS1Q8NBB2 130 aa1.8□□□□□ -2.12
LIMA1-206ENST00000550611 CDC42SE1Q9NRR8 79 aa1.8□□□□□ -2.12
LIMA1-206ENST00000550611 A0A087WVE0 104 aa1.79□□□□□ -2.12
LIMA1-206ENST00000550611 JMJD7-PLA2G4BH0Y9G9 81 aa1.79□□□□□ -2.12
LIMA1-206ENST00000550611 K7ERS5 55 aa1.79□□□□□ -2.12
LIMA1-206ENST00000550611 MT1FP04733 61 aa1.79□□□□□ -2.12
LIMA1-206ENST00000550611 TSPEAR-AS2P59090 65 aa1.79□□□□□ -2.12
LIMA1-206ENST00000550611 DEFB116Q30KQ4 102 aa1.79□□□□□ -2.12
LIMA1-206ENST00000550611 TMEM254Q8TBM7 123 aa1.79□□□□□ -2.12
LIMA1-206ENST00000550611 H0YGX0 51 aa1.78□□□□□ -2.12
LIMA1-206ENST00000550611 NDUFB1O75438 58 aa1.78□□□□□ -2.12
LIMA1-206ENST00000550611 KRTAP2-1Q9BYU5 128 aa1.78□□□□□ -2.12
LIMA1-206ENST00000550611 PDE6GP18545 87 aa1.77□□□□□ -2.13
LIMA1-206ENST00000550611 ELOF1P60002 83 aaKnown RBP1.77□□□□□ -2.13
LIMA1-206ENST00000550611 NREPQ16612 68 aa1.77□□□□□ -2.13
LIMA1-206ENST00000550611 Q5VV11 94 aa1.77□□□□□ -2.13
LIMA1-206ENST00000550611 PRR15LQ9BU68 103 aa1.77□□□□□ -2.13
LIMA1-206ENST00000550611 H3BQ85 93 aa1.76□□□□□ -2.13
LIMA1-206ENST00000550611 C1orf64Q8NEQ6 169 aa1.76□□□□□ -2.13
LIMA1-206ENST00000550611 ORMDL1Q9P0S3 153 aa1.76□□□□□ -2.13
LIMA1-206ENST00000550611 A0A0G2JQZ4 141 aa1.75□□□□□ -2.13
LIMA1-206ENST00000550611 TRBV7-4A0A0J9YYF1 115 aa1.75□□□□□ -2.13
LIMA1-206ENST00000550611 LOC101927531A0A1B0GV80 90 aa1.75□□□□□ -2.13
LIMA1-206ENST00000550611 A0A1B0GVX0 72 aa1.75□□□□□ -2.13
LIMA1-206ENST00000550611 BPY2O14599 106 aa1.75□□□□□ -2.13
LIMA1-206ENST00000550611 KRTAP10-10P60014 251 aa1.75□□□□□ -2.13
LIMA1-206ENST00000550611 OBSCN-AS1Q96MR7 158 aa1.75□□□□□ -2.13
LIMA1-206ENST00000550611 C14orf132Q9NPU4 83 aa1.75□□□□□ -2.13
LIMA1-206ENST00000550611 IGLV5-48A0A075B6I7 105 aa1.74□□□□□ -2.13
LIMA1-206ENST00000550611 ROMO1P60602 79 aa1.73□□□□□ -2.13
LIMA1-206ENST00000550611 C20orf166-AS1Q96NR2 134 aa1.73□□□□□ -2.13
LIMA1-206ENST00000550611 A8MUU9 505 aa1.72□□□□□ -2.13
LIMA1-206ENST00000550611 COX7BP24311 80 aa1.72□□□□□ -2.13
LIMA1-206ENST00000550611 MIR22HGQ0VDD5 57 aa1.72□□□□□ -2.13
LIMA1-206ENST00000550611 LUZP6Q538Z0 58 aa1.72□□□□□ -2.13
LIMA1-206ENST00000550611 DEFB105AQ8NG35 78 aa1.72□□□□□ -2.13
LIMA1-206ENST00000550611 LINC00208Q96KT6 92 aa1.72□□□□□ -2.13
LIMA1-206ENST00000550611 DSTQ03001 7570 aaKnown RBP1.72□□□□□ -2.13
LIMA1-206ENST00000550611 Q6ZQT0 140 aa1.71□□□□□ -2.14
LIMA1-206ENST00000550611 SPANXA2-OT1Q8N9U9 137 aa1.71□□□□□ -2.14
LIMA1-206ENST00000550611 LINC00308Q8TCZ7 52 aa1.71□□□□□ -2.14
LIMA1-206ENST00000550611 LOC110117498A0A087WWA1 95 aa1.7□□□□□ -2.14
LIMA1-206ENST00000550611 H3BPC8 53 aa1.7□□□□□ -2.14
LIMA1-206ENST00000550611 HRES1P13985 223 aa1.7□□□□□ -2.14
LIMA1-206ENST00000550611 Q96NJ1 140 aa1.7□□□□□ -2.14
LIMA1-206ENST00000550611 C8orf17Q9NRJ1 99 aa1.7□□□□□ -2.14
LIMA1-206ENST00000550611 LINC01558Q9Y6Z2 57 aa1.7□□□□□ -2.14
LIMA1-206ENST00000550611 SPRR2EP22531 72 aa1.69□□□□□ -2.14
LIMA1-206ENST00000550611 SPRR2BP35325 72 aa1.69□□□□□ -2.14
LIMA1-206ENST00000550611 SPRR2AP35326 72 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms