RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 TMEM14CQ9P0S9 112 aa1.79□□□□□ -2.12
LIMA1-205ENST00000550592 TRAV12-3A0A0B4J271 114 aa1.78□□□□□ -2.12
LIMA1-205ENST00000550592 TRBV6-1A0A0K0K1D8 114 aa1.78□□□□□ -2.12
LIMA1-205ENST00000550592 H0YGX0 51 aa1.78□□□□□ -2.12
LIMA1-205ENST00000550592 NDUFB1O75438 58 aa1.78□□□□□ -2.12
LIMA1-205ENST00000550592 HTN1P15515 57 aa1.78□□□□□ -2.12
LIMA1-205ENST00000550592 PDE6HQ13956 83 aa1.78□□□□□ -2.12
LIMA1-205ENST00000550592 TRGV2A0A075B6R0 118 aa1.77□□□□□ -2.13
LIMA1-205ENST00000550592 CRPP02741 224 aa1.77□□□□□ -2.13
LIMA1-205ENST00000550592 PDE6GP18545 87 aa1.77□□□□□ -2.13
LIMA1-205ENST00000550592 ELOF1P60002 83 aaKnown RBP1.77□□□□□ -2.13
LIMA1-205ENST00000550592 NREPQ16612 68 aa1.77□□□□□ -2.13
LIMA1-205ENST00000550592 Q5VV11 94 aa1.77□□□□□ -2.13
LIMA1-205ENST00000550592 C9orf163Q8N9P6 203 aa1.77□□□□□ -2.13
LIMA1-205ENST00000550592 Q8TAT8 98 aa1.77□□□□□ -2.13
LIMA1-205ENST00000550592 PRR15LQ9BU68 103 aa1.77□□□□□ -2.13
LIMA1-205ENST00000550592 PRO0255Q9UI72 69 aa1.77□□□□□ -2.13
LIMA1-205ENST00000550592 MUC17Q685J3 4493 aa1.77□□□□□ -2.13
LIMA1-205ENST00000550592 PRCDQ00LT1 54 aa1.76□□□□□ -2.13
LIMA1-205ENST00000550592 C10orf113Q5VZT2 155 aa1.76□□□□□ -2.13
LIMA1-205ENST00000550592 ZNF625Q96I27 306 aaPredicted RBP1.76□□□□□ -2.13
LIMA1-205ENST00000550592 KRTAP4-1Q9BYQ7 146 aa1.76□□□□□ -2.13
LIMA1-205ENST00000550592 CDC42SE2Q9NRR3 84 aa1.76□□□□□ -2.13
LIMA1-205ENST00000550592 PLAC8Q9NZF1 115 aa1.76□□□□□ -2.13
LIMA1-205ENST00000550592 ORMDL1Q9P0S3 153 aa1.76□□□□□ -2.13
LIMA1-205ENST00000550592 MUC12Q9UKN1 5478 aa1.75□□□□□ -2.13
LIMA1-205ENST00000550592 TRBV7-4A0A0J9YYF1 115 aa1.75□□□□□ -2.13
LIMA1-205ENST00000550592 LOC101927531A0A1B0GV80 90 aa1.75□□□□□ -2.13
LIMA1-205ENST00000550592 IGIPA6NJ69 53 aa1.75□□□□□ -2.13
LIMA1-205ENST00000550592 K7EIM0 57 aa1.75□□□□□ -2.13
LIMA1-205ENST00000550592 DEFB1P60022 68 aa1.75□□□□□ -2.13
LIMA1-205ENST00000550592 OBSCN-AS1Q96MR7 158 aa1.75□□□□□ -2.13
LIMA1-205ENST00000550592 C14orf132Q9NPU4 83 aa1.75□□□□□ -2.13
LIMA1-205ENST00000550592 MRPL36Q9P0J6 103 aaKnown RBP1.75□□□□□ -2.13
LIMA1-205ENST00000550592 TRBV6-5A0A0K0K1A5 114 aa1.74□□□□□ -2.13
LIMA1-205ENST00000550592 SPAG11BQ08648 103 aa1.74□□□□□ -2.13
LIMA1-205ENST00000550592 SPINK13Q1W4C9 94 aa1.74□□□□□ -2.13
LIMA1-205ENST00000550592 SPAG11AQ6PDA7 123 aa1.74□□□□□ -2.13
LIMA1-205ENST00000550592 KRTAP2-1Q9BYU5 128 aa1.74□□□□□ -2.13
LIMA1-205ENST00000550592 A8MTW9 85 aa1.73□□□□□ -2.13
LIMA1-205ENST00000550592 I3L2K1 104 aa1.73□□□□□ -2.13
LIMA1-205ENST00000550592 ROMO1P60602 79 aa1.73□□□□□ -2.13
LIMA1-205ENST00000550592 KRTAP19-2Q3LHN2 52 aa1.73□□□□□ -2.13
LIMA1-205ENST00000550592 Q86TA4 180 aa1.73□□□□□ -2.13
LIMA1-205ENST00000550592 SMIM2Q9BVW6 85 aa1.73□□□□□ -2.13
LIMA1-205ENST00000550592 NDUFA4L2Q9NRX3 87 aa1.73□□□□□ -2.13
LIMA1-205ENST00000550592 TRGV1A0A0A0MS02 117 aa1.72□□□□□ -2.13
LIMA1-205ENST00000550592 WT1-ASQ06250 92 aa1.72□□□□□ -2.13
LIMA1-205ENST00000550592 MIR22HGQ0VDD5 57 aa1.72□□□□□ -2.13
LIMA1-205ENST00000550592 KRTAP19-6Q3LI70 58 aa1.72□□□□□ -2.13
LIMA1-205ENST00000550592 LINC00208Q96KT6 92 aa1.72□□□□□ -2.13
LIMA1-205ENST00000550592 C22orf24Q9Y442 160 aa1.72□□□□□ -2.13
LIMA1-205ENST00000550592 TRBV10-1A0A0K0K1A3 114 aa1.71□□□□□ -2.14
LIMA1-205ENST00000550592 NCR3O14931 201 aa1.71□□□□□ -2.14
LIMA1-205ENST00000550592 SPINK9Q5DT21 86 aa1.71□□□□□ -2.14
LIMA1-205ENST00000550592 Q6ZQT0 140 aa1.71□□□□□ -2.14
LIMA1-205ENST00000550592 COA5Q86WW8 74 aa1.71□□□□□ -2.14
LIMA1-205ENST00000550592 LENEPQ9Y5L5 61 aa1.71□□□□□ -2.14
LIMA1-205ENST00000550592 LOC110117498A0A087WWA1 95 aa1.7□□□□□ -2.14
LIMA1-205ENST00000550592 LINC00308Q8TCZ7 52 aa1.7□□□□□ -2.14
LIMA1-205ENST00000550592 COX7B2Q8TF08 81 aa1.7□□□□□ -2.14
LIMA1-205ENST00000550592 AMELXQ99217 191 aa1.7□□□□□ -2.14
LIMA1-205ENST00000550592 CNFNQ9BYD5 112 aa1.7□□□□□ -2.14
LIMA1-205ENST00000550592 LINC01558Q9Y6Z2 57 aa1.7□□□□□ -2.14
LIMA1-205ENST00000550592 MGPP08493 103 aa1.69□□□□□ -2.14
LIMA1-205ENST00000550592 CSAG1Q6PB30 78 aa1.69□□□□□ -2.14
LIMA1-205ENST00000550592 COX6B2Q6YFQ2 88 aa1.69□□□□□ -2.14
LIMA1-205ENST00000550592 A0A087WSZ3 146 aa1.68□□□□□ -2.14
LIMA1-205ENST00000550592 ETDCA0A1B0GVM5 59 aa1.68□□□□□ -2.14
LIMA1-205ENST00000550592 H0Y9P7 68 aa1.68□□□□□ -2.14
LIMA1-205ENST00000550592 NDUFA1O15239 70 aa1.68□□□□□ -2.14
LIMA1-205ENST00000550592 CRIP1P50238 77 aa1.68□□□□□ -2.14
LIMA1-205ENST00000550592 UQCR11O14957 56 aa1.67□□□□□ -2.14
LIMA1-205ENST00000550592 RNASE3P12724 160 aaKnown RBP1.67□□□□□ -2.14
LIMA1-205ENST00000550592 COX6A2Q02221 97 aa1.67□□□□□ -2.14
LIMA1-205ENST00000550592 C1orf137Q5JT78 98 aa1.67□□□□□ -2.14
LIMA1-205ENST00000550592 DMAC1Q96GE9 116 aa1.67□□□□□ -2.14
LIMA1-205ENST00000550592 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.66□□□□□ -2.14
LIMA1-205ENST00000550592 IGKV2-29A2NJV5 120 aaPredicted RBP1.65□□□□□ -2.15
LIMA1-205ENST00000550592 SMIM11BQ8TCY0 68 aa1.65□□□□□ -2.15
LIMA1-205ENST00000550592 POLR2KP53803 58 aaKnown RBP1.64□□□□□ -2.15
LIMA1-205ENST00000550592 SPINK7P58062 85 aa1.64□□□□□ -2.15
LIMA1-205ENST00000550592 SPATA8Q6RVD6 105 aa1.64□□□□□ -2.15
LIMA1-205ENST00000550592 LINC00158P58513 81 aa1.63□□□□□ -2.15
LIMA1-205ENST00000550592 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
LIMA1-205ENST00000550592 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.63□□□□□ -2.15
LIMA1-205ENST00000550592 RPL39LQ96EH5 51 aaKnown RBP1.63□□□□□ -2.15
LIMA1-205ENST00000550592 A0A096LNI7 61 aa1.62□□□□□ -2.15
LIMA1-205ENST00000550592 TRBV6-4A0A1B0GX49 114 aa1.62□□□□□ -2.15
LIMA1-205ENST00000550592 COX7BP24311 80 aa1.62□□□□□ -2.15
LIMA1-205ENST00000550592 RPL39P62891 51 aaKnown RBP1.62□□□□□ -2.15
LIMA1-205ENST00000550592 KCNQ1DNQ9H478 68 aa1.62□□□□□ -2.15
LIMA1-205ENST00000550592 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.61□□□□□ -2.15
LIMA1-205ENST00000550592 IGKV2-40A0A087WW87 121 aaPredicted RBP1.61□□□□□ -2.15
LIMA1-205ENST00000550592 IGKV2D-40P01614 121 aaPredicted RBP1.61□□□□□ -2.15
LIMA1-205ENST00000550592 ANGP03950 147 aaKnown RBP1.61□□□□□ -2.15
LIMA1-205ENST00000550592 COX17Q14061 63 aa1.61□□□□□ -2.15
LIMA1-205ENST00000550592 MDN1Q9NU22 5596 aa1.6□□□□□ -2.15
LIMA1-205ENST00000550592 FLGP20930 4061 aaPredicted RBP1.6□□□□□ -2.15
LIMA1-205ENST00000550592 A0A1B0GU69 56 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms