RNA–Protein interactions for RNA: ENST00000548365.5

TGFBR1-205, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 3

Gene TGFBR1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-205ENST00000548365 LINC01554Q52M75 96 aa2.82□□□□□ -1.96
TGFBR1-205ENST00000548365 PRKDCP78527 4128 aaKnown RBP2.82□□□□□ -1.96
TGFBR1-205ENST00000548365 STAB1Q9NY15 2570 aa2.82□□□□□ -1.96
TGFBR1-205ENST00000548365 ANAPC11Q9NYG5 84 aa2.81□□□□□ -1.96
TGFBR1-205ENST00000548365 CSMD3Q7Z407 3707 aa2.8□□□□□ -1.96
TGFBR1-205ENST00000548365 NDUFAF8A1L188 74 aa2.79□□□□□ -1.96
TGFBR1-205ENST00000548365 KRTAP13-2Q52LG2 175 aa2.79□□□□□ -1.96
TGFBR1-205ENST00000548365 NOTCH1P46531 2555 aa2.79□□□□□ -1.96
TGFBR1-205ENST00000548365 DNAH2Q9P225 4427 aa2.78□□□□□ -1.96
TGFBR1-205ENST00000548365 KRTAP1-4P0C5Y4 121 aa2.78□□□□□ -1.96
TGFBR1-205ENST00000548365 FBN1P35555 2871 aaKnown RBP2.77□□□□□ -1.97
TGFBR1-205ENST00000548365 C20orf166-AS1Q96NR2 134 aa2.77□□□□□ -1.97
TGFBR1-205ENST00000548365 SRRM2Q9UQ35 2752 aaKnown RBP2.77□□□□□ -1.97
TGFBR1-205ENST00000548365 A8MUU9 505 aa2.76□□□□□ -1.97
TGFBR1-205ENST00000548365 K7ERS5 55 aa2.75□□□□□ -1.97
TGFBR1-205ENST00000548365 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
TGFBR1-205ENST00000548365 TYMSOSQ8TAI1 123 aa2.75□□□□□ -1.97
TGFBR1-205ENST00000548365 COL7A1Q02388 2944 aa2.74□□□□□ -1.97
TGFBR1-205ENST00000548365 LINC00304Q8N9R0 145 aa2.74□□□□□ -1.97
TGFBR1-205ENST00000548365 COL6A5A8TX70 2615 aa2.74□□□□□ -1.97
TGFBR1-205ENST00000548365 STARD9Q9P2P6 4700 aa2.74□□□□□ -1.97
TGFBR1-205ENST00000548365 MGAM2Q2M2H8 2515 aa2.74□□□□□ -1.97
TGFBR1-205ENST00000548365 FRAS1Q86XX4 4008 aa2.73□□□□□ -1.97
TGFBR1-205ENST00000548365 DNAH5Q8TE73 4624 aa2.73□□□□□ -1.97
TGFBR1-205ENST00000548365 DNAH11Q96DT5 4516 aa2.72□□□□□ -1.97
TGFBR1-205ENST00000548365 COX6B2Q6YFQ2 88 aa2.72□□□□□ -1.97
TGFBR1-205ENST00000548365 A0A1B0GU33 70 aa2.71□□□□□ -1.98
TGFBR1-205ENST00000548365 H1FX-AS1Q4G0G2 97 aa2.71□□□□□ -1.98
TGFBR1-205ENST00000548365 SACSQ9NZJ4 4579 aa2.71□□□□□ -1.98
TGFBR1-205ENST00000548365 KRTAP25-1Q3LHN0 102 aa2.7□□□□□ -1.98
TGFBR1-205ENST00000548365 OBSCNQ5VST9 7968 aa2.7□□□□□ -1.98
TGFBR1-205ENST00000548365 H0YAA0 97 aa2.69□□□□□ -1.98
TGFBR1-205ENST00000548365 KRTAP10-1P60331 282 aa2.69□□□□□ -1.98
TGFBR1-205ENST00000548365 CSAG1Q6PB30 78 aa2.69□□□□□ -1.98
TGFBR1-205ENST00000548365 MEGF8Q7Z7M0 2845 aa2.69□□□□□ -1.98
TGFBR1-205ENST00000548365 KMT2AQ03164 3969 aa2.68□□□□□ -1.98
TGFBR1-205ENST00000548365 FBN3Q75N90 2809 aa2.67□□□□□ -1.98
TGFBR1-205ENST00000548365 ADM2Q7Z4H4 148 aa2.67□□□□□ -1.98
TGFBR1-205ENST00000548365 PKD1P98161 4303 aa2.65□□□□□ -1.98
TGFBR1-205ENST00000548365 ROMO1P60602 79 aa2.65□□□□□ -1.99
TGFBR1-205ENST00000548365 RPL37P61927 97 aaKnown RBP2.64□□□□□ -1.99
TGFBR1-205ENST00000548365 KRTAP21-3Q3LHN1 58 aa2.64□□□□□ -1.99
TGFBR1-205ENST00000548365 PKHD1L1Q86WI1 4243 aa2.64□□□□□ -1.99
TGFBR1-205ENST00000548365 LRP1BQ9NZR2 4599 aa2.63□□□□□ -1.99
TGFBR1-205ENST00000548365 FAT2Q9NYQ8 4349 aa2.62□□□□□ -1.99
TGFBR1-205ENST00000548365 TGP01266 2768 aa2.62□□□□□ -1.99
TGFBR1-205ENST00000548365 VPS13BQ7Z7G8 4022 aa2.62□□□□□ -1.99
TGFBR1-205ENST00000548365 APOBP04114 4563 aaKnown RBP2.61□□□□□ -1.99
TGFBR1-205ENST00000548365 PKHD1P08F94 4074 aa2.59□□□□□ -1.99
TGFBR1-205ENST00000548365 KRTAP10-4P60372 401 aaPredicted RBP2.59□□□□□ -1.99
TGFBR1-205ENST00000548365 KRTAP12-2P59991 146 aa2.58□□□□□ -2
TGFBR1-205ENST00000548365 M0QZ58 72 aa2.56□□□□□ -2
TGFBR1-205ENST00000548365 S4R3F8 94 aa2.56□□□□□ -2
TGFBR1-205ENST00000548365 C9orf92A6NGG3 77 aa2.55□□□□□ -2
TGFBR1-205ENST00000548365 KRTAP10-8P60410 259 aa2.53□□□□□ -2
TGFBR1-205ENST00000548365 CRIPTQ9P021 101 aa2.53□□□□□ -2
TGFBR1-205ENST00000548365 DYNC1H1Q14204 4646 aaKnown RBP2.53□□□□□ -2
TGFBR1-205ENST00000548365 KRTAP4-3Q9BYR4 195 aa2.52□□□□□ -2.01
TGFBR1-205ENST00000548365 TNXBP22105 4242 aa2.52□□□□□ -2.01
TGFBR1-205ENST00000548365 FLG2Q5D862 2391 aaPredicted RBP2.51□□□□□ -2.01
TGFBR1-205ENST00000548365 FAT3Q8TDW7 4589 aa2.5□□□□□ -2.01
TGFBR1-205ENST00000548365 HSPG2P98160 4391 aa2.49□□□□□ -2.01
TGFBR1-205ENST00000548365 FAT1Q14517 4588 aa2.49□□□□□ -2.01
TGFBR1-205ENST00000548365 TPRXLQ17RH7 258 aa2.49□□□□□ -2.01
TGFBR1-205ENST00000548365 KRTAP13-4Q3LI77 160 aa2.48□□□□□ -2.01
TGFBR1-205ENST00000548365 LCE3AQ5TA76 89 aa2.48□□□□□ -2.01
TGFBR1-205ENST00000548365 LRP1Q07954 4544 aaKnown RBP2.48□□□□□ -2.01
TGFBR1-205ENST00000548365 SPINT4Q6UDR6 99 aa2.47□□□□□ -2.01
TGFBR1-205ENST00000548365 KRTAP12-1P59990 96 aa2.46□□□□□ -2.02
TGFBR1-205ENST00000548365 SMR3BP02814 79 aaPredicted RBP2.45□□□□□ -2.02
TGFBR1-205ENST00000548365 P0C880 135 aa2.45□□□□□ -2.02
TGFBR1-205ENST00000548365 PP632Q6XCG6 107 aa2.44□□□□□ -2.02
TGFBR1-205ENST00000548365 HYDINQ4G0P3 5121 aa2.43□□□□□ -2.02
TGFBR1-205ENST00000548365 DNHD1Q96M86 4753 aa2.42□□□□□ -2.02
TGFBR1-205ENST00000548365 A0A0D9SG42 100 aa2.42□□□□□ -2.02
TGFBR1-205ENST00000548365 Q5VSD8 79 aa2.42□□□□□ -2.02
TGFBR1-205ENST00000548365 DMBT1Q9UGM3 2413 aaPredicted RBP2.39□□□□□ -2.03
TGFBR1-205ENST00000548365 MT1HL1P0DM35 61 aa2.37□□□□□ -2.03
TGFBR1-205ENST00000548365 KRTAP5-5Q701N2 237 aaPredicted RBP2.37□□□□□ -2.03
TGFBR1-205ENST00000548365 KRTAP5-2Q701N4 177 aa2.37□□□□□ -2.03
TGFBR1-205ENST00000548365 R4GN34 69 aa2.37□□□□□ -2.03
TGFBR1-205ENST00000548365 MYCBP2O75592 4640 aa2.36□□□□□ -2.03
TGFBR1-205ENST00000548365 C10orf95Q9H7T3 257 aa2.35□□□□□ -2.03
TGFBR1-205ENST00000548365 PLAC4Q8WY50 150 aa2.32□□□□□ -2.04
TGFBR1-205ENST00000548365 RYR2Q92736 4967 aa2.31□□□□□ -2.04
TGFBR1-205ENST00000548365 LUZP6Q538Z0 58 aa2.29□□□□□ -2.04
TGFBR1-205ENST00000548365 RYR1P21817 5038 aa2.28□□□□□ -2.04
TGFBR1-205ENST00000548365 MUC17Q685J3 4493 aa2.27□□□□□ -2.05
TGFBR1-205ENST00000548365 SPRR5A0A1B0GTR4 108 aa2.25□□□□□ -2.05
TGFBR1-205ENST00000548365 TNP1P09430 55 aa2.25□□□□□ -2.05
TGFBR1-205ENST00000548365 CAMK2N1Q7Z7J9 78 aa2.23□□□□□ -2.05
TGFBR1-205ENST00000548365 KRTAP19-2Q3LHN2 52 aa2.22□□□□□ -2.05
TGFBR1-205ENST00000548365 LCE3DQ9BYE3 92 aa2.22□□□□□ -2.05
TGFBR1-205ENST00000548365 KMT2CQ8NEZ4 4911 aaKnown RBP2.21□□□□□ -2.06
TGFBR1-205ENST00000548365 LRP2P98164 4655 aa2.2□□□□□ -2.06
TGFBR1-205ENST00000548365 RYR3Q15413 4870 aa2.18□□□□□ -2.06
TGFBR1-205ENST00000548365 FLGP20930 4061 aaPredicted RBP2.18□□□□□ -2.06
TGFBR1-205ENST00000548365 LPAP08519 4548 aa2.17□□□□□ -2.06
TGFBR1-205ENST00000548365 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
TGFBR1-205ENST00000548365 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms