RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, human

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR5-204	ENST00000547310	SON	P18583	2426 aa	Known RBP	0.69	□□□□□ -2.3
LGR5-204	ENST00000547310	TACC2	O95359	2948 aa		0.68	□□□□□ -2.3
LGR5-204	ENST00000547310	LAMA5	O15230	3695 aa		0.68	□□□□□ -2.3
LGR5-204	ENST00000547310	COL7A1	Q02388	2944 aa		0.68	□□□□□ -2.3
LGR5-204	ENST00000547310	RELN	P78509	3460 aa		0.68	□□□□□ -2.3
LGR5-204	ENST00000547310	ZZEF1	O43149	2961 aa		0.67	□□□□□ -2.3
LGR5-204	ENST00000547310	ANKHD1	Q8IWZ3	2542 aa	Known RBP	0.67	□□□□□ -2.3
LGR5-204	ENST00000547310	KRTAP6-2	Q3LI66	62 aa		0.67	□□□□□ -2.3
LGR5-204	ENST00000547310	SETX	Q7Z333	2677 aa	Known RBP	0.67	□□□□□ -2.3
LGR5-204	ENST00000547310	HECTD4	Q9Y4D8	3996 aa		0.67	□□□□□ -2.3
LGR5-204	ENST00000547310	SYNE1	Q8NF91	8797 aa	Known RBP	0.67	□□□□□ -2.3
LGR5-204	ENST00000547310	DNAH6	Q9C0G6	4158 aa		0.66	□□□□□ -2.3
LGR5-204	ENST00000547310	DMXL1	Q9Y485	3027 aa		0.66	□□□□□ -2.3
LGR5-204	ENST00000547310	SPG11	Q96JI7	2443 aa		0.66	□□□□□ -2.3
LGR5-204	ENST00000547310	DNAH10	Q8IVF4	4471 aa		0.65	□□□□□ -2.3
LGR5-204	ENST00000547310	ZFYVE26	Q68DK2	2539 aa		0.65	□□□□□ -2.31
LGR5-204	ENST00000547310	FLNB	O75369	2602 aa	Known RBP	0.65	□□□□□ -2.31
LGR5-204	ENST00000547310	ANKRD11	Q6UB99	2663 aa	Predicted RBP	0.65	□□□□□ -2.31
LGR5-204	ENST00000547310	LRP1	Q07954	4544 aa	Known RBP	0.65	□□□□□ -2.31
LGR5-204	ENST00000547310	LPA	P08519	4548 aa		0.65	□□□□□ -2.31
LGR5-204	ENST00000547310	CD52	P31358	61 aa		0.64	□□□□□ -2.31
LGR5-204	ENST00000547310	SPRR2F	Q96RM1	72 aa		0.64	□□□□□ -2.31
LGR5-204	ENST00000547310	NBEAL2	Q6ZNJ1	2754 aa		0.64	□□□□□ -2.31
LGR5-204	ENST00000547310	FLG	P20930	4061 aa	Predicted RBP	0.64	□□□□□ -2.31
LGR5-204	ENST00000547310	CFAP54	Q96N23	3096 aa		0.63	□□□□□ -2.31
LGR5-204	ENST00000547310	UTP20	O75691	2785 aa	Known RBP	0.62	□□□□□ -2.31
LGR5-204	ENST00000547310	DNAH1	Q9P2D7	4330 aa		0.62	□□□□□ -2.31
LGR5-204	ENST00000547310	SPRR2E	P22531	72 aa		0.62	□□□□□ -2.31
LGR5-204	ENST00000547310	AHNAK	Q09666	5890 aa	Known RBP	0.62	□□□□□ -2.31
LGR5-204	ENST00000547310	TLN2	Q9Y4G6	2542 aa		0.62	□□□□□ -2.31
LGR5-204	ENST00000547310	SPTBN5	Q9NRC6	3674 aa	Known RBP	0.61	□□□□□ -2.31
LGR5-204	ENST00000547310	CSMD1	Q96PZ7	3565 aa		0.61	□□□□□ -2.31
LGR5-204	ENST00000547310	HIVEP1	P15822	2718 aa		0.61	□□□□□ -2.31
LGR5-204	ENST00000547310	FRYL	O94915	3013 aa		0.61	□□□□□ -2.31
LGR5-204	ENST00000547310	ZAN	Q9Y493	2812 aa		0.6	□□□□□ -2.31
LGR5-204	ENST00000547310	DNAH9	Q9NYC9	4486 aa		0.6	□□□□□ -2.31
LGR5-204	ENST00000547310	APOB	P04114	4563 aa	Known RBP	0.6	□□□□□ -2.31
LGR5-204	ENST00000547310	CMYA5	Q8N3K9	4069 aa		0.6	□□□□□ -2.31
LGR5-204	ENST00000547310	HRNR	Q86YZ3	2850 aa	Predicted RBP	0.6	□□□□□ -2.31
LGR5-204	ENST00000547310	FAT3	Q8TDW7	4589 aa		0.6	□□□□□ -2.31
LGR5-204	ENST00000547310	DMXL2	Q8TDJ6	3036 aa		0.59	□□□□□ -2.31
LGR5-204	ENST00000547310	PKHD1	P08F94	4074 aa		0.59	□□□□□ -2.31
LGR5-204	ENST00000547310	NIPBL	Q6KC79	2804 aa	eCLIP	0.59	□□□□□ -2.32
LGR5-204	ENST00000547310	WDR87	Q6ZQQ6	2873 aa		0.59	□□□□□ -2.32
LGR5-204	ENST00000547310	TRIO	O75962	3097 aa		0.58	□□□□□ -2.32
LGR5-204	ENST00000547310	NBEA	Q8NFP9	2946 aa		0.58	□□□□□ -2.32
LGR5-204	ENST00000547310	COL6A3	P12111	3177 aa		0.58	□□□□□ -2.32
LGR5-204	ENST00000547310	SVEP1	Q4LDE5	3571 aa		0.57	□□□□□ -2.32
LGR5-204	ENST00000547310	ATM	Q13315	3056 aa		0.57	□□□□□ -2.32
LGR5-204	ENST00000547310	PLEC	Q15149	4684 aa	Known RBP	0.57	□□□□□ -2.32
LGR5-204	ENST00000547310	LAMA3	Q16787	3333 aa		0.56	□□□□□ -2.32
LGR5-204	ENST00000547310	SZT2	Q5T011	3432 aa		0.56	□□□□□ -2.32
LGR5-204	ENST00000547310	USP9X	Q93008	2570 aa	Predicted RBP	0.56	□□□□□ -2.32
LGR5-204	ENST00000547310	TEP1	Q99973	2627 aa	Known RBP	0.56	□□□□□ -2.32
LGR5-204	ENST00000547310	SMG1	Q96Q15	3661 aa	Known RBP	0.56	□□□□□ -2.32
LGR5-204	ENST00000547310	MYO18B	Q8IUG5	2567 aa		0.55	□□□□□ -2.32
LGR5-204	ENST00000547310	TG	P01266	2768 aa		0.55	□□□□□ -2.32
LGR5-204	ENST00000547310	ITPR1	Q14643	2758 aa		0.55	□□□□□ -2.32
LGR5-204	ENST00000547310	FLNA	P21333	2647 aa	Known RBP	0.55	□□□□□ -2.32
LGR5-204	ENST00000547310	FAT1	Q14517	4588 aa		0.55	□□□□□ -2.32
LGR5-204	ENST00000547310	FASN	P49327	2511 aa	Known RBP	0.54	□□□□□ -2.32
LGR5-204	ENST00000547310	LRBA	P50851	2863 aa		0.54	□□□□□ -2.32
LGR5-204	ENST00000547310	MUC5B	Q9HC84	5762 aa	Predicted RBP	0.53	□□□□□ -2.32
LGR5-204	ENST00000547310	C5orf42	Q9H799	3197 aa		0.53	□□□□□ -2.32
LGR5-204	ENST00000547310	MT1E	P04732	61 aa		0.53	□□□□□ -2.32
LGR5-204	ENST00000547310	PRUNE2	Q8WUY3	3088 aa		0.53	□□□□□ -2.33
LGR5-204	ENST00000547310	LRP1B	Q9NZR2	4599 aa		0.52	□□□□□ -2.33
LGR5-204	ENST00000547310	KALRN	O60229	2985 aa		0.52	□□□□□ -2.33
LGR5-204	ENST00000547310	MGAM2	Q2M2H8	2515 aa		0.52	□□□□□ -2.33
LGR5-204	ENST00000547310	CFAP46	Q8IYW2	2715 aa		0.51	□□□□□ -2.33
LGR5-204	ENST00000547310	LAMA1	P25391	3075 aa		0.51	□□□□□ -2.33
LGR5-204	ENST00000547310	MT1H	P80294	61 aa		0.51	□□□□□ -2.33
LGR5-204	ENST00000547310	MXRA5	Q9NR99	2828 aa		0.51	□□□□□ -2.33
LGR5-204	ENST00000547310	TEX15	Q9BXT5	2789 aa		0.51	□□□□□ -2.33
LGR5-204	ENST00000547310	TRRAP	Q9Y4A5	3859 aa		0.5	□□□□□ -2.33
LGR5-204	ENST00000547310	DNAH12	Q6ZR08	3092 aa		0.5	□□□□□ -2.33
LGR5-204	ENST00000547310	HTN3	P15516	51 aa		0.5	□□□□□ -2.33
LGR5-204	ENST00000547310	MDN1	Q9NU22	5596 aa		0.49	□□□□□ -2.33
LGR5-204	ENST00000547310	DNAH5	Q8TE73	4624 aa		0.49	□□□□□ -2.33
LGR5-204	ENST00000547310	BOD1L1	Q8NFC6	3051 aa		0.49	□□□□□ -2.33
LGR5-204	ENST00000547310	MAP1A	P78559	2803 aa	Predicted RBP	0.49	□□□□□ -2.33
LGR5-204	ENST00000547310	DMD	P11532	3685 aa		0.49	□□□□□ -2.33
LGR5-204	ENST00000547310	MKI67	P46013	3256 aa	Known RBP	0.49	□□□□□ -2.33
LGR5-204	ENST00000547310	HTT	P42858	3142 aa		0.49	□□□□□ -2.33
LGR5-204	ENST00000547310	DOPEY1	Q5JWR5	2465 aa		0.48	□□□□□ -2.33
LGR5-204	ENST00000547310	FREM2	Q5SZK8	3169 aa		0.48	□□□□□ -2.33
LGR5-204	ENST00000547310	DNAH17	Q9UFH2	4485 aa		0.48	□□□□□ -2.33
LGR5-204	ENST00000547310	NBEAL1	Q6ZS30	2694 aa		0.48	□□□□□ -2.33
LGR5-204	ENST00000547310	MT1L	Q93083	61 aa		0.48	□□□□□ -2.33
LGR5-204	ENST00000547310	CSMD2	Q7Z408	3487 aa		0.48	□□□□□ -2.33
LGR5-204	ENST00000547310	XIRP2	A4UGR9	3374 aa		0.48	□□□□□ -2.33
LGR5-204	ENST00000547310	DCHS1	Q96JQ0	3298 aa		0.47	□□□□□ -2.33
LGR5-204	ENST00000547310	CEP350	Q5VT06	3117 aa		0.47	□□□□□ -2.33
LGR5-204	ENST00000547310	ITPR2	Q14571	2701 aa		0.47	□□□□□ -2.33
LGR5-204	ENST00000547310	ADGRG4	Q8IZF6	3080 aa		0.47	□□□□□ -2.33
LGR5-204	ENST00000547310	MAST4	O15021	2626 aa		0.47	□□□□□ -2.33
LGR5-204	ENST00000547310	SPTAN1	Q13813	2472 aa	Known RBP	0.45	□□□□□ -2.34
LGR5-204	ENST00000547310	IGSF10	Q6WRI0	2623 aa		0.45	□□□□□ -2.34
LGR5-204	ENST00000547310	DEFB4A	O15263	64 aa		0.45	□□□□□ -2.34
LGR5-204	ENST00000547310	DYNC1H1	Q14204	4646 aa	Known RBP	0.45	□□□□□ -2.34

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