RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 KRTAP12-3P60328 96 aa2.77□□□□□ -1.97
DMD-228ENST00000541735 INE1O15225 51 aa2.76□□□□□ -1.97
DMD-228ENST00000541735 AKAP9Q99996 3911 aa2.76□□□□□ -1.97
DMD-228ENST00000541735 LCE3AQ5TA76 89 aa2.76□□□□□ -1.97
DMD-228ENST00000541735 LCE2BO14633 110 aa2.76□□□□□ -1.97
DMD-228ENST00000541735 SPRR2FQ96RM1 72 aa2.74□□□□□ -1.97
DMD-228ENST00000541735 KRTAP23-1A1A580 65 aa2.7□□□□□ -1.98
DMD-228ENST00000541735 KRTAP10-7P60409 375 aaPredicted RBP2.65□□□□□ -1.99
DMD-228ENST00000541735 SPRR2EP22531 72 aa2.62□□□□□ -1.99
DMD-228ENST00000541735 SPRR2BP35325 72 aa2.62□□□□□ -1.99
DMD-228ENST00000541735 SPRR2AP35326 72 aa2.62□□□□□ -1.99
DMD-228ENST00000541735 HUWE1Q7Z6Z7 4374 aaKnown RBP2.6□□□□□ -1.99
DMD-228ENST00000541735 KRTAP17-1Q9BYP8 105 aa2.56□□□□□ -2
DMD-228ENST00000541735 MT1HP80294 61 aa2.56□□□□□ -2
DMD-228ENST00000541735 ALMS1Q8TCU4 4167 aa2.55□□□□□ -2
DMD-228ENST00000541735 KRTAP10-4P60372 401 aaPredicted RBP2.54□□□□□ -2
DMD-228ENST00000541735 LCE2CQ5TA81 110 aa2.54□□□□□ -2
DMD-228ENST00000541735 SPRR2DP22532 72 aa2.52□□□□□ -2.01
DMD-228ENST00000541735 SPRR5A0A1B0GTR4 108 aa2.5□□□□□ -2.01
DMD-228ENST00000541735 KRTAP4-1Q9BYQ7 146 aa2.5□□□□□ -2.01
DMD-228ENST00000541735 LYSTQ99698 3801 aa2.49□□□□□ -2.01
DMD-228ENST00000541735 ANK2Q01484 3957 aa2.49□□□□□ -2.01
DMD-228ENST00000541735 DNHD1Q96M86 4753 aa2.48□□□□□ -2.01
DMD-228ENST00000541735 KRTAP19-5Q3LI72 72 aa2.48□□□□□ -2.01
DMD-228ENST00000541735 PRKDCP78527 4128 aaKnown RBP2.48□□□□□ -2.01
DMD-228ENST00000541735 KMT2AQ03164 3969 aa2.48□□□□□ -2.01
DMD-228ENST00000541735 LCE3BQ5TA77 95 aa2.47□□□□□ -2.01
DMD-228ENST00000541735 DNAH9Q9NYC9 4486 aa2.47□□□□□ -2.01
DMD-228ENST00000541735 DNAH10Q8IVF4 4471 aa2.47□□□□□ -2.01
DMD-228ENST00000541735 MT2AP02795 61 aa2.46□□□□□ -2.02
DMD-228ENST00000541735 RYR1P21817 5038 aa2.45□□□□□ -2.02
DMD-228ENST00000541735 MT1FP04733 61 aa2.43□□□□□ -2.02
DMD-228ENST00000541735 LOC100996750A0A140TA64 210 aa2.41□□□□□ -2.02
DMD-228ENST00000541735 KRTAP4-6Q9BYQ5 205 aa2.41□□□□□ -2.02
DMD-228ENST00000541735 PLECQ15149 4684 aaKnown RBP2.41□□□□□ -2.02
DMD-228ENST00000541735 CMYA5Q8N3K9 4069 aa2.4□□□□□ -2.03
DMD-228ENST00000541735 DNAH1Q9P2D7 4330 aa2.39□□□□□ -2.03
DMD-228ENST00000541735 FRAS1Q86XX4 4008 aa2.39□□□□□ -2.03
DMD-228ENST00000541735 STARD9Q9P2P6 4700 aa2.38□□□□□ -2.03
DMD-228ENST00000541735 MT1GP13640 62 aa2.37□□□□□ -2.03
DMD-228ENST00000541735 VPS13BQ7Z7G8 4022 aa2.37□□□□□ -2.03
DMD-228ENST00000541735 DNAH7Q8WXX0 4024 aa2.37□□□□□ -2.03
DMD-228ENST00000541735 DNAH11Q96DT5 4516 aa2.36□□□□□ -2.03
DMD-228ENST00000541735 KRTAP12-4P60329 112 aa2.36□□□□□ -2.03
DMD-228ENST00000541735 MT4P47944 62 aa2.36□□□□□ -2.03
DMD-228ENST00000541735 DNAH2Q9P225 4427 aa2.34□□□□□ -2.04
DMD-228ENST00000541735 LCE3CQ5T5A8 94 aa2.34□□□□□ -2.04
DMD-228ENST00000541735 PCLOQ9Y6V0 5065 aa2.34□□□□□ -2.04
DMD-228ENST00000541735 KRTAP19-4Q3LI73 84 aa2.33□□□□□ -2.04
DMD-228ENST00000541735 FAT1Q14517 4588 aa2.33□□□□□ -2.04
DMD-228ENST00000541735 DNAH5Q8TE73 4624 aa2.33□□□□□ -2.04
DMD-228ENST00000541735 DNAH6Q9C0G6 4158 aa2.32□□□□□ -2.04
DMD-228ENST00000541735 VPS13DQ5THJ4 4388 aa2.3□□□□□ -2.04
DMD-228ENST00000541735 DNAH8Q96JB1 4490 aa2.29□□□□□ -2.04
DMD-228ENST00000541735 FAT3Q8TDW7 4589 aa2.29□□□□□ -2.04
DMD-228ENST00000541735 KRTAP19-1Q8IUB9 90 aa2.28□□□□□ -2.04
DMD-228ENST00000541735 LRP1BQ9NZR2 4599 aa2.28□□□□□ -2.04
DMD-228ENST00000541735 SPRR2GQ9BYE4 73 aa2.28□□□□□ -2.05
DMD-228ENST00000541735 DNAH17Q9UFH2 4485 aa2.27□□□□□ -2.05
DMD-228ENST00000541735 DNAH3Q8TD57 4116 aa2.27□□□□□ -2.05
DMD-228ENST00000541735 KRTAP4-8A0A0G2JLE6 195 aa2.27□□□□□ -2.05
DMD-228ENST00000541735 KRTAP4-8Q9BYQ9 185 aa2.27□□□□□ -2.05
DMD-228ENST00000541735 FAT2Q9NYQ8 4349 aa2.26□□□□□ -2.05
DMD-228ENST00000541735 PKHD1P08F94 4074 aa2.26□□□□□ -2.05
DMD-228ENST00000541735 LCE1BQ5T7P3 118 aa2.24□□□□□ -2.05
DMD-228ENST00000541735 KRTAP4-12Q9BQ66 201 aa2.23□□□□□ -2.05
DMD-228ENST00000541735 MYCBP2O75592 4640 aa2.22□□□□□ -2.05
DMD-228ENST00000541735 DYNC1H1Q14204 4646 aaKnown RBP2.21□□□□□ -2.06
DMD-228ENST00000541735 SACSQ9NZJ4 4579 aa2.21□□□□□ -2.06
DMD-228ENST00000541735 DYNC2H1Q8NCM8 4307 aaKnown RBP2.2□□□□□ -2.06
DMD-228ENST00000541735 LRP1Q07954 4544 aaKnown RBP2.2□□□□□ -2.06
DMD-228ENST00000541735 HECTD4Q9Y4D8 3996 aa2.2□□□□□ -2.06
DMD-228ENST00000541735 KRTAP9-2Q9BYQ4 174 aa2.19□□□□□ -2.06
DMD-228ENST00000541735 LCE1DQ5T752 114 aa2.19□□□□□ -2.06
DMD-228ENST00000541735 HYDINQ4G0P3 5121 aa2.18□□□□□ -2.06
DMD-228ENST00000541735 LCE3EQ5T5B0 92 aa2.18□□□□□ -2.06
DMD-228ENST00000541735 RYR3Q15413 4870 aa2.16□□□□□ -2.06
DMD-228ENST00000541735 LCE3DQ9BYE3 92 aa2.16□□□□□ -2.06
DMD-228ENST00000541735 LPAP08519 4548 aa2.16□□□□□ -2.06
DMD-228ENST00000541735 APOBP04114 4563 aaKnown RBP2.15□□□□□ -2.07
DMD-228ENST00000541735 KRTAP4-7Q9BYR0 210 aa2.13□□□□□ -2.07
DMD-228ENST00000541735 KRTAP9-9Q9BYP9 154 aa2.12□□□□□ -2.07
DMD-228ENST00000541735 KRTAP9-4Q9BYQ2 154 aa2.12□□□□□ -2.07
DMD-228ENST00000541735 KIAA1109Q2LD37 5005 aa2.12□□□□□ -2.07
DMD-228ENST00000541735 LCE5AQ5TCM9 118 aa2.12□□□□□ -2.07
DMD-228ENST00000541735 HSPG2P98160 4391 aa2.12□□□□□ -2.07
DMD-228ENST00000541735 KMT2CQ8NEZ4 4911 aaKnown RBP2.12□□□□□ -2.07
DMD-228ENST00000541735 MT1XP80297 61 aa2.12□□□□□ -2.07
DMD-228ENST00000541735 KRTAP9-6A0A140TA67 174 aa2.11□□□□□ -2.07
DMD-228ENST00000541735 KRTAP20-1Q3LI63 56 aa2.08□□□□□ -2.08
DMD-228ENST00000541735 LRP2P98164 4655 aa2.07□□□□□ -2.08
DMD-228ENST00000541735 GPR98Q8WXG9 6306 aa2.07□□□□□ -2.08
DMD-228ENST00000541735 MT1BP07438 61 aa2.06□□□□□ -2.08
DMD-228ENST00000541735 KRTAP9-8Q9BYQ0 159 aa2.05□□□□□ -2.08
DMD-228ENST00000541735 MT3P25713 68 aa2.04□□□□□ -2.08
DMD-228ENST00000541735 KRTAP19-3Q7Z4W3 81 aa2.04□□□□□ -2.08
DMD-228ENST00000541735 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.04□□□□□ -2.08
DMD-228ENST00000541735 KRTAP19-8Q3LI54 63 aa2.04□□□□□ -2.08
DMD-228ENST00000541735 KRTAP19-6Q3LI70 58 aa2.04□□□□□ -2.08
DMD-228ENST00000541735 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms