RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 KRTAP4-5Q9BYR2 181 aa5.23□□□□□ -1.57
EIF3A-203ENST00000541549 KRTAP10-12P60413 245 aa5.2□□□□□ -1.58
EIF3A-203ENST00000541549 FAT1Q14517 4588 aa5.19□□□□□ -1.58
EIF3A-203ENST00000541549 DNAH8Q96JB1 4490 aa5.18□□□□□ -1.58
EIF3A-203ENST00000541549 DNAH10Q8IVF4 4471 aa5.18□□□□□ -1.58
EIF3A-203ENST00000541549 PLECQ15149 4684 aaKnown RBP5.18□□□□□ -1.58
EIF3A-203ENST00000541549 KRTAP12-3P60328 96 aa5.15□□□□□ -1.59
EIF3A-203ENST00000541549 LCE3AQ5TA76 89 aa5.14□□□□□ -1.59
EIF3A-203ENST00000541549 DNAH1Q9P2D7 4330 aa5.13□□□□□ -1.59
EIF3A-203ENST00000541549 DNHD1Q96M86 4753 aa5.12□□□□□ -1.59
EIF3A-203ENST00000541549 ANK2Q01484 3957 aa5.11□□□□□ -1.59
EIF3A-203ENST00000541549 KRTAP23-1A1A580 65 aa5.09□□□□□ -1.59
EIF3A-203ENST00000541549 CRCT1Q9UGL9 99 aa5.05□□□□□ -1.6
EIF3A-203ENST00000541549 VPS13DQ5THJ4 4388 aa5.03□□□□□ -1.6
EIF3A-203ENST00000541549 DNAH3Q8TD57 4116 aa5.03□□□□□ -1.6
EIF3A-203ENST00000541549 STARD9Q9P2P6 4700 aa5.03□□□□□ -1.6
EIF3A-203ENST00000541549 CMYA5Q8N3K9 4069 aa5.03□□□□□ -1.6
EIF3A-203ENST00000541549 MYCBP2O75592 4640 aa5.02□□□□□ -1.61
EIF3A-203ENST00000541549 LRP1BQ9NZR2 4599 aa5.01□□□□□ -1.61
EIF3A-203ENST00000541549 DNAH2Q9P225 4427 aa4.99□□□□□ -1.61
EIF3A-203ENST00000541549 PRKDCP78527 4128 aaKnown RBP4.98□□□□□ -1.61
EIF3A-203ENST00000541549 DNAH17Q9UFH2 4485 aa4.98□□□□□ -1.61
EIF3A-203ENST00000541549 KRTAP4-1Q9BYQ7 146 aa4.95□□□□□ -1.62
EIF3A-203ENST00000541549 RYR1P21817 5038 aa4.95□□□□□ -1.62
EIF3A-203ENST00000541549 DYNC1H1Q14204 4646 aaKnown RBP4.95□□□□□ -1.62
EIF3A-203ENST00000541549 LYSTQ99698 3801 aa4.94□□□□□ -1.62
EIF3A-203ENST00000541549 KMT2AQ03164 3969 aa4.91□□□□□ -1.62
EIF3A-203ENST00000541549 ALMS1Q8TCU4 4167 aa4.89□□□□□ -1.63
EIF3A-203ENST00000541549 SACSQ9NZJ4 4579 aa4.87□□□□□ -1.63
EIF3A-203ENST00000541549 APOBP04114 4563 aaKnown RBP4.85□□□□□ -1.63
EIF3A-203ENST00000541549 DNAH7Q8WXX0 4024 aa4.85□□□□□ -1.63
EIF3A-203ENST00000541549 DYNC2H1Q8NCM8 4307 aaKnown RBP4.84□□□□□ -1.64
EIF3A-203ENST00000541549 KIAA1109Q2LD37 5005 aa4.8□□□□□ -1.64
EIF3A-203ENST00000541549 FAT3Q8TDW7 4589 aa4.79□□□□□ -1.64
EIF3A-203ENST00000541549 FRAS1Q86XX4 4008 aa4.79□□□□□ -1.64
EIF3A-203ENST00000541549 VPS13BQ7Z7G8 4022 aa4.77□□□□□ -1.65
EIF3A-203ENST00000541549 HECTD4Q9Y4D8 3996 aa4.77□□□□□ -1.65
EIF3A-203ENST00000541549 KRTAP10-5P60370 271 aa4.76□□□□□ -1.65
EIF3A-203ENST00000541549 DNAH6Q9C0G6 4158 aa4.74□□□□□ -1.65
EIF3A-203ENST00000541549 SPRR2GQ9BYE4 73 aa4.73□□□□□ -1.65
EIF3A-203ENST00000541549 LRP1Q07954 4544 aaKnown RBP4.7□□□□□ -1.66
EIF3A-203ENST00000541549 MT2AP02795 61 aa4.7□□□□□ -1.66
EIF3A-203ENST00000541549 MT1HP80294 61 aa4.68□□□□□ -1.66
EIF3A-203ENST00000541549 FAT2Q9NYQ8 4349 aa4.64□□□□□ -1.67
EIF3A-203ENST00000541549 MT1FP04733 61 aa4.64□□□□□ -1.67
EIF3A-203ENST00000541549 KRTAP8-1Q8IUC2 63 aa4.64□□□□□ -1.67
EIF3A-203ENST00000541549 HYDINQ4G0P3 5121 aa4.63□□□□□ -1.67
EIF3A-203ENST00000541549 RYR3Q15413 4870 aa4.61□□□□□ -1.67
EIF3A-203ENST00000541549 LRP2P98164 4655 aa4.58□□□□□ -1.68
EIF3A-203ENST00000541549 KRTAP19-5Q3LI72 72 aa4.57□□□□□ -1.68
EIF3A-203ENST00000541549 PKHD1P08F94 4074 aa4.54□□□□□ -1.68
EIF3A-203ENST00000541549 KRTAP19-1Q8IUB9 90 aa4.52□□□□□ -1.69
EIF3A-203ENST00000541549 KRTAP17-1Q9BYP8 105 aa4.52□□□□□ -1.69
EIF3A-203ENST00000541549 LCE3CQ5T5A8 94 aa4.52□□□□□ -1.69
EIF3A-203ENST00000541549 PKD1P98161 4303 aa4.48□□□□□ -1.69
EIF3A-203ENST00000541549 RYR2Q92736 4967 aa4.45□□□□□ -1.7
EIF3A-203ENST00000541549 KRTAP10-7P60409 375 aaPredicted RBP4.45□□□□□ -1.7
EIF3A-203ENST00000541549 SYNE1Q8NF91 8797 aaKnown RBP4.4□□□□□ -1.7
EIF3A-203ENST00000541549 SPRR5A0A1B0GTR4 108 aa4.39□□□□□ -1.71
EIF3A-203ENST00000541549 KRTAP19-8Q3LI54 63 aa4.37□□□□□ -1.71
EIF3A-203ENST00000541549 HERC2O95714 4834 aa4.37□□□□□ -1.71
EIF3A-203ENST00000541549 MT1XP80297 61 aa4.35□□□□□ -1.71
EIF3A-203ENST00000541549 KMT2CQ8NEZ4 4911 aaKnown RBP4.35□□□□□ -1.71
EIF3A-203ENST00000541549 HSPG2P98160 4391 aa4.33□□□□□ -1.72
EIF3A-203ENST00000541549 SPRR2FQ96RM1 72 aa4.3□□□□□ -1.72
EIF3A-203ENST00000541549 MT1BP07438 61 aa4.29□□□□□ -1.72
EIF3A-203ENST00000541549 PKHD1L1Q86WI1 4243 aa4.26□□□□□ -1.73
EIF3A-203ENST00000541549 KRTAP4-8A0A0G2JLE6 195 aa4.24□□□□□ -1.73
EIF3A-203ENST00000541549 KRTAP4-8Q9BYQ9 185 aa4.24□□□□□ -1.73
EIF3A-203ENST00000541549 KRTAP9-8Q9BYQ0 159 aa4.23□□□□□ -1.73
EIF3A-203ENST00000541549 PCLOQ9Y6V0 5065 aa4.23□□□□□ -1.73
EIF3A-203ENST00000541549 LPAP08519 4548 aa4.22□□□□□ -1.73
EIF3A-203ENST00000541549 KRTAP12-4P60329 112 aa4.22□□□□□ -1.73
EIF3A-203ENST00000541549 TNXBP22105 4242 aa4.21□□□□□ -1.74
EIF3A-203ENST00000541549 KRTAP19-4Q3LI73 84 aa4.2□□□□□ -1.74
EIF3A-203ENST00000541549 LCE2CQ5TA81 110 aa4.19□□□□□ -1.74
EIF3A-203ENST00000541549 LCE3BQ5TA77 95 aa4.17□□□□□ -1.74
EIF3A-203ENST00000541549 MT1GP13640 62 aa4.15□□□□□ -1.74
EIF3A-203ENST00000541549 UBR4Q5T4S7 5183 aa4.11□□□□□ -1.75
EIF3A-203ENST00000541549 MUC17Q685J3 4493 aa4.1□□□□□ -1.75
EIF3A-203ENST00000541549 EPPK1P58107 5090 aaKnown RBP4.09□□□□□ -1.75
EIF3A-203ENST00000541549 OBSCNQ5VST9 7968 aa4.09□□□□□ -1.75
EIF3A-203ENST00000541549 KRTAP9-3Q9BYQ3 159 aa4.09□□□□□ -1.75
EIF3A-203ENST00000541549 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
EIF3A-203ENST00000541549 KRTAP19-2Q3LHN2 52 aa4.07□□□□□ -1.76
EIF3A-203ENST00000541549 HERC1Q15751 4861 aa4.07□□□□□ -1.76
EIF3A-203ENST00000541549 FSIP2Q5CZC0 6907 aa4.06□□□□□ -1.76
EIF3A-203ENST00000541549 ABCA13Q86UQ4 5058 aa4.04□□□□□ -1.76
EIF3A-203ENST00000541549 BIRC6Q9NR09 4857 aa3.99□□□□□ -1.77
EIF3A-203ENST00000541549 MUC2Q02817 5179 aa3.94□□□□□ -1.78
EIF3A-203ENST00000541549 LCE3DQ9BYE3 92 aa3.94□□□□□ -1.78
EIF3A-203ENST00000541549 FLGP20930 4061 aaPredicted RBP3.94□□□□□ -1.78
EIF3A-203ENST00000541549 LCE2BO14633 110 aa3.93□□□□□ -1.78
EIF3A-203ENST00000541549 MT1LQ93083 61 aa3.92□□□□□ -1.78
EIF3A-203ENST00000541549 SPRR2EP22531 72 aa3.88□□□□□ -1.79
EIF3A-203ENST00000541549 SPRR2BP35325 72 aa3.88□□□□□ -1.79
EIF3A-203ENST00000541549 SPRR2AP35326 72 aa3.88□□□□□ -1.79
EIF3A-203ENST00000541549 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
EIF3A-203ENST00000541549 MT1EP04732 61 aa3.87□□□□□ -1.79
EIF3A-203ENST00000541549 HMCN2Q8NDA2 5059 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms