RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 NDUFA1O15239 70 aa2.92□□□□□ -1.94
DDB1-219ENST00000541513 Q8IZM0 81 aa2.92□□□□□ -1.94
DDB1-219ENST00000541513 HSPG2P98160 4391 aa2.92□□□□□ -1.94
DDB1-219ENST00000541513 RYR1P21817 5038 aa2.91□□□□□ -1.94
DDB1-219ENST00000541513 A0A1W2PNN7 141 aa2.91□□□□□ -1.94
DDB1-219ENST00000541513 KRTAP10-1P60331 282 aa2.91□□□□□ -1.94
DDB1-219ENST00000541513 ZNF625Q96I27 306 aaPredicted RBP2.91□□□□□ -1.94
DDB1-219ENST00000541513 COX17Q14061 63 aa2.9□□□□□ -1.95
DDB1-219ENST00000541513 Q6ZSA8 131 aa2.9□□□□□ -1.95
DDB1-219ENST00000541513 KIAA1109Q2LD37 5005 aa2.89□□□□□ -1.95
DDB1-219ENST00000541513 H0YGX0 51 aa2.89□□□□□ -1.95
DDB1-219ENST00000541513 UNQ6190/PRO20217Q6UXQ8 127 aa2.89□□□□□ -1.95
DDB1-219ENST00000541513 TOMM7Q9P0U1 55 aa2.89□□□□□ -1.95
DDB1-219ENST00000541513 C6orf48Q9UBA6 75 aa2.89□□□□□ -1.95
DDB1-219ENST00000541513 VPS13BQ7Z7G8 4022 aa2.89□□□□□ -1.95
DDB1-219ENST00000541513 LOC110117498A0A087WWA1 95 aa2.88□□□□□ -1.95
DDB1-219ENST00000541513 FAT1Q14517 4588 aa2.88□□□□□ -1.95
DDB1-219ENST00000541513 HERC2O95714 4834 aa2.88□□□□□ -1.95
DDB1-219ENST00000541513 A0A096LNI7 61 aa2.87□□□□□ -1.95
DDB1-219ENST00000541513 COA5Q86WW8 74 aa2.87□□□□□ -1.95
DDB1-219ENST00000541513 SRRM2Q9UQ35 2752 aaKnown RBP2.87□□□□□ -1.95
DDB1-219ENST00000541513 IGKV2-24A0A0C4DH68 120 aa2.86□□□□□ -1.95
DDB1-219ENST00000541513 HAMPP81172 84 aa2.86□□□□□ -1.95
DDB1-219ENST00000541513 PKHD1L1Q86WI1 4243 aa2.86□□□□□ -1.95
DDB1-219ENST00000541513 RPL37AP61513 92 aaKnown RBP2.85□□□□□ -1.95
DDB1-219ENST00000541513 KCNQ1DNQ9H478 68 aa2.85□□□□□ -1.95
DDB1-219ENST00000541513 LINC00472Q9H8W2 130 aa2.85□□□□□ -1.95
DDB1-219ENST00000541513 ETDCA0A1B0GVM5 59 aa2.84□□□□□ -1.95
DDB1-219ENST00000541513 IGFL1Q6UW32 110 aa2.84□□□□□ -1.95
DDB1-219ENST00000541513 INE1O15225 51 aa2.83□□□□□ -1.96
DDB1-219ENST00000541513 LINC00158P58513 81 aa2.83□□□□□ -1.96
DDB1-219ENST00000541513 FLG2Q5D862 2391 aaPredicted RBP2.83□□□□□ -1.96
DDB1-219ENST00000541513 Q96NJ1 140 aa2.82□□□□□ -1.96
DDB1-219ENST00000541513 NCR3O14931 201 aa2.81□□□□□ -1.96
DDB1-219ENST00000541513 SMR3BP02814 79 aaPredicted RBP2.81□□□□□ -1.96
DDB1-219ENST00000541513 IGKV4-1P06312 121 aa2.81□□□□□ -1.96
DDB1-219ENST00000541513 COX7BP24311 80 aa2.81□□□□□ -1.96
DDB1-219ENST00000541513 KRTAP10-4P60372 401 aaPredicted RBP2.81□□□□□ -1.96
DDB1-219ENST00000541513 Q5VSD8 79 aa2.81□□□□□ -1.96
DDB1-219ENST00000541513 A0A1B0GU69 56 aa2.8□□□□□ -1.96
DDB1-219ENST00000541513 LINC00308Q8TCZ7 52 aa2.79□□□□□ -1.96
DDB1-219ENST00000541513 ABCA13Q86UQ4 5058 aa2.78□□□□□ -1.96
DDB1-219ENST00000541513 LINC00304Q8N9R0 145 aa2.78□□□□□ -1.96
DDB1-219ENST00000541513 FAT3Q8TDW7 4589 aa2.78□□□□□ -1.96
DDB1-219ENST00000541513 MYCBP2O75592 4640 aa2.78□□□□□ -1.97
DDB1-219ENST00000541513 DMBT1Q9UGM3 2413 aaPredicted RBP2.77□□□□□ -1.97
DDB1-219ENST00000541513 ACYP2P14621 99 aa2.76□□□□□ -1.97
DDB1-219ENST00000541513 SPRR1AP35321 89 aa2.76□□□□□ -1.97
DDB1-219ENST00000541513 SPINK6Q6UWN8 80 aa2.76□□□□□ -1.97
DDB1-219ENST00000541513 KRTAP13-1Q8IUC0 172 aa2.76□□□□□ -1.97
DDB1-219ENST00000541513 LRP1Q07954 4544 aaKnown RBP2.76□□□□□ -1.97
DDB1-219ENST00000541513 KRTAP10-8P60410 259 aa2.74□□□□□ -1.97
DDB1-219ENST00000541513 PCLOQ9Y6V0 5065 aa2.74□□□□□ -1.97
DDB1-219ENST00000541513 TNXBP22105 4242 aa2.73□□□□□ -1.97
DDB1-219ENST00000541513 Q6ZRX8 168 aa2.72□□□□□ -1.97
DDB1-219ENST00000541513 PRLHP81277 87 aa2.71□□□□□ -1.98
DDB1-219ENST00000541513 Q6ZQY7 126 aa2.71□□□□□ -1.98
DDB1-219ENST00000541513 SMIM11BQ8TCY0 68 aa2.71□□□□□ -1.98
DDB1-219ENST00000541513 SPRR5A0A1B0GTR4 108 aa2.69□□□□□ -1.98
DDB1-219ENST00000541513 MT1HL1P0DM35 61 aa2.69□□□□□ -1.98
DDB1-219ENST00000541513 KRTAP10-12P60413 245 aa2.68□□□□□ -1.98
DDB1-219ENST00000541513 LINC00575Q6W349 94 aa2.68□□□□□ -1.98
DDB1-219ENST00000541513 HERC1Q15751 4861 aa2.67□□□□□ -1.98
DDB1-219ENST00000541513 SPRR1BP22528 89 aa2.67□□□□□ -1.98
DDB1-219ENST00000541513 SSBP3-AS1Q7Z2R9 100 aa2.67□□□□□ -1.98
DDB1-219ENST00000541513 IGLV5-48A0A075B6I7 105 aa2.66□□□□□ -1.98
DDB1-219ENST00000541513 OBSCNQ5VST9 7968 aa2.65□□□□□ -1.98
DDB1-219ENST00000541513 LCE3CQ5T5A8 94 aa2.65□□□□□ -1.99
DDB1-219ENST00000541513 DEFB105AQ8NG35 78 aa2.63□□□□□ -1.99
DDB1-219ENST00000541513 PLAC4Q8WY50 150 aa2.63□□□□□ -1.99
DDB1-219ENST00000541513 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
DDB1-219ENST00000541513 SPINK1P00995 79 aa2.61□□□□□ -1.99
DDB1-219ENST00000541513 RPS29P62273 56 aaKnown RBP2.61□□□□□ -1.99
DDB1-219ENST00000541513 HMCN2Q8NDA2 5059 aa2.6□□□□□ -1.99
DDB1-219ENST00000541513 KRTAP4-3Q9BYR4 195 aa2.59□□□□□ -1.99
DDB1-219ENST00000541513 KRTAP13-4Q3LI77 160 aa2.58□□□□□ -2
DDB1-219ENST00000541513 PP632Q6XCG6 107 aa2.58□□□□□ -2
DDB1-219ENST00000541513 KRTAP9-6A8MVA2 160 aa2.57□□□□□ -2
DDB1-219ENST00000541513 LRP2P98164 4655 aa2.57□□□□□ -2
DDB1-219ENST00000541513 LPAP08519 4548 aa2.53□□□□□ -2
DDB1-219ENST00000541513 KRTAP10-5P60370 271 aa2.53□□□□□ -2
DDB1-219ENST00000541513 TP53AIP1Q9HCN2 124 aa2.53□□□□□ -2
DDB1-219ENST00000541513 KRTAP12-2P59991 146 aa2.52□□□□□ -2.01
DDB1-219ENST00000541513 KRTAP13-3Q3SY46 172 aa2.51□□□□□ -2.01
DDB1-219ENST00000541513 CRIPTQ9P021 101 aa2.51□□□□□ -2.01
DDB1-219ENST00000541513 COX6B2Q6YFQ2 88 aa2.5□□□□□ -2.01
DDB1-219ENST00000541513 UBR4Q5T4S7 5183 aa2.5□□□□□ -2.01
DDB1-219ENST00000541513 MUC17Q685J3 4493 aa2.48□□□□□ -2.01
DDB1-219ENST00000541513 K7EQZ3 153 aa2.48□□□□□ -2.01
DDB1-219ENST00000541513 PCOTHQ58A44 107 aa2.47□□□□□ -2.01
DDB1-219ENST00000541513 C9orf92A6NGG3 77 aa2.46□□□□□ -2.02
DDB1-219ENST00000541513 RPL37P61927 97 aaKnown RBP2.45□□□□□ -2.02
DDB1-219ENST00000541513 MRPL34Q9BQ48 92 aaKnown RBP2.45□□□□□ -2.02
DDB1-219ENST00000541513 RNF213Q63HN8 5207 aa2.43□□□□□ -2.02
DDB1-219ENST00000541513 H0YAA0 97 aa2.43□□□□□ -2.02
DDB1-219ENST00000541513 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
DDB1-219ENST00000541513 WFDC13Q8IUB5 93 aa2.42□□□□□ -2.02
DDB1-219ENST00000541513 MMP24-AS1A0A0U1RRL7 71 aa2.4□□□□□ -2.03
DDB1-219ENST00000541513 KRTAP4-1Q9BYQ7 146 aa2.38□□□□□ -2.03
DDB1-219ENST00000541513 FAT4Q6V0I7 4981 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms