RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 LY75O60449 1722 aa-0.98□□□□□ -2.57
CCDC7-209ENST00000539197 CLASP1Q7Z460 1538 aa-0.98□□□□□ -2.57
CCDC7-209ENST00000539197 K7EMI3 77 aa-0.99□□□□□ -2.57
CCDC7-209ENST00000539197 M0R1W7 72 aa-0.99□□□□□ -2.57
CCDC7-209ENST00000539197 MAST1Q9Y2H9 1570 aa-1□□□□□ -2.57
CCDC7-209ENST00000539197 MYO15AQ9UKN7 3530 aa-1.01□□□□□ -2.57
CCDC7-209ENST00000539197 M0QY20 66 aa-1.01□□□□□ -2.57
CCDC7-209ENST00000539197 MT1XP80297 61 aa-1.01□□□□□ -2.57
CCDC7-209ENST00000539197 SRCAPQ6ZRS2 3230 aa-1.02□□□□□ -2.57
CCDC7-209ENST00000539197 MROH1Q8NDA8 1641 aa-1.02□□□□□ -2.57
CCDC7-209ENST00000539197 KAAG1Q9UBP8 84 aa-1.02□□□□□ -2.57
CCDC7-209ENST00000539197 CDC42BPAQ5VT25 1732 aa-1.03□□□□□ -2.57
CCDC7-209ENST00000539197 CEP295Q9C0D2 2601 aa-1.03□□□□□ -2.57
CCDC7-209ENST00000539197 M0QZ58 72 aa-1.03□□□□□ -2.57
CCDC7-209ENST00000539197 ABRACLQ9P1F3 81 aa-1.03□□□□□ -2.57
CCDC7-209ENST00000539197 DNAH17Q9UFH2 4485 aa-1.03□□□□□ -2.57
CCDC7-209ENST00000539197 GLI2P10070 1586 aa-1.04□□□□□ -2.58
CCDC7-209ENST00000539197 LINC00308Q8TCZ7 52 aa-1.04□□□□□ -2.58
CCDC7-209ENST00000539197 CHD7Q9P2D1 2997 aa-1.04□□□□□ -2.58
CCDC7-209ENST00000539197 TIAM1Q13009 1591 aa-1.04□□□□□ -2.58
CCDC7-209ENST00000539197 DMXL2Q8TDJ6 3036 aa-1.05□□□□□ -2.58
CCDC7-209ENST00000539197 MT1EP04732 61 aa-1.05□□□□□ -2.58
CCDC7-209ENST00000539197 ADGRG4Q8IZF6 3080 aa-1.05□□□□□ -2.58
CCDC7-209ENST00000539197 CSMD1Q96PZ7 3565 aa-1.06□□□□□ -2.58
CCDC7-209ENST00000539197 LRBAP50851 2863 aa-1.06□□□□□ -2.58
CCDC7-209ENST00000539197 NMES1Q9C002 83 aa-1.07□□□□□ -2.58
CCDC7-209ENST00000539197 TMEM167BQ9NRX6 74 aa-1.07□□□□□ -2.58
CCDC7-209ENST00000539197 SPTAN1Q13813 2472 aaKnown RBP-1.07□□□□□ -2.58
CCDC7-209ENST00000539197 EEA1Q15075 1411 aa-1.07□□□□□ -2.58
CCDC7-209ENST00000539197 MADDQ8WXG6 1647 aa-1.07□□□□□ -2.58
CCDC7-209ENST00000539197 CFAP46Q8IYW2 2715 aa-1.08□□□□□ -2.58
CCDC7-209ENST00000539197 SMIM27A0A1W2PRY6 76 aa-1.08□□□□□ -2.58
CCDC7-209ENST00000539197 IGIPA6NJ69 53 aa-1.08□□□□□ -2.58
CCDC7-209ENST00000539197 A8MTW9 85 aa-1.08□□□□□ -2.58
CCDC7-209ENST00000539197 SERF2P84101 59 aa-1.08□□□□□ -2.58
CCDC7-209ENST00000539197 KRTAP19-6Q3LI70 58 aa-1.08□□□□□ -2.58
CCDC7-209ENST00000539197 DNAH10Q8IVF4 4471 aa-1.08□□□□□ -2.58
CCDC7-209ENST00000539197 MYO9AB2RTY4 2548 aa-1.1□□□□□ -2.58
CCDC7-209ENST00000539197 CROCC2H7BZ55 1655 aa-1.1□□□□□ -2.58
CCDC7-209ENST00000539197 WFDC10BQ8IUB3 73 aa-1.1□□□□□ -2.59
CCDC7-209ENST00000539197 MT1LQ93083 61 aa-1.1□□□□□ -2.59
CCDC7-209ENST00000539197 MGAQ8IWI9 3026 aa-1.1□□□□□ -2.59
CCDC7-209ENST00000539197 TRRAPQ9Y4A5 3859 aa-1.1□□□□□ -2.59
CCDC7-209ENST00000539197 SPART-AS1P0CW21 52 aa-1.11□□□□□ -2.59
CCDC7-209ENST00000539197 EFCAB5A4FU69 1503 aa-1.11□□□□□ -2.59
CCDC7-209ENST00000539197 SCRIBQ14160 1630 aa-1.11□□□□□ -2.59
CCDC7-209ENST00000539197 ABCA6Q8N139 1617 aa-1.11□□□□□ -2.59
CCDC7-209ENST00000539197 DNAH5Q8TE73 4624 aa-1.12□□□□□ -2.59
CCDC7-209ENST00000539197 A0A087WWC5 75 aa-1.13□□□□□ -2.59
CCDC7-209ENST00000539197 LINC01546A6NGU7 62 aa-1.13□□□□□ -2.59
CCDC7-209ENST00000539197 BOD1L1Q8NFC6 3051 aa-1.15□□□□□ -2.59
CCDC7-209ENST00000539197 A0A1B0GUL6 1792 aa-1.15□□□□□ -2.59
CCDC7-209ENST00000539197 EFCAB6Q5THR3 1501 aa-1.15□□□□□ -2.59
CCDC7-209ENST00000539197 EYSQ5T1H1 3165 aa-1.16□□□□□ -2.6
CCDC7-209ENST00000539197 H0YGX0 51 aa-1.17□□□□□ -2.6
CCDC7-209ENST00000539197 MT1HL1P0DM35 61 aa-1.18□□□□□ -2.6
CCDC7-209ENST00000539197 MT1GP13640 62 aa-1.19□□□□□ -2.6
CCDC7-209ENST00000539197 S100ZQ8WXG8 99 aa-1.19□□□□□ -2.6
CCDC7-209ENST00000539197 ALS2Q96Q42 1657 aa-1.2□□□□□ -2.6
CCDC7-209ENST00000539197 CPS1P31327 1500 aa-1.2□□□□□ -2.6
CCDC7-209ENST00000539197 TLN1Q9Y490 2541 aaKnown RBP-1.2□□□□□ -2.6
CCDC7-209ENST00000539197 UGGT1Q9NYU2 1555 aa-1.2□□□□□ -2.6
CCDC7-209ENST00000539197 SMG1Q96Q15 3661 aaKnown RBP-1.2□□□□□ -2.6
CCDC7-209ENST00000539197 FAM208AQ9UK61 1670 aaKnown RBP-1.2□□□□□ -2.6
CCDC7-209ENST00000539197 PREX2Q70Z35 1606 aa-1.21□□□□□ -2.6
CCDC7-209ENST00000539197 CSMD2Q7Z408 3487 aa-1.21□□□□□ -2.6
CCDC7-209ENST00000539197 ZFHX4Q86UP3 3567 aa-1.22□□□□□ -2.6
CCDC7-209ENST00000539197 KIF21BO75037 1637 aa-1.22□□□□□ -2.61
CCDC7-209ENST00000539197 CCDC180Q9P1Z9 1646 aa-1.22□□□□□ -2.61
CCDC7-209ENST00000539197 TFF3Q07654 80 aa-1.24□□□□□ -2.61
CCDC7-209ENST00000539197 SMIM5Q71RC9 77 aa-1.24□□□□□ -2.61
CCDC7-209ENST00000539197 POLR2KP53803 58 aaKnown RBP-1.25□□□□□ -2.61
CCDC7-209ENST00000539197 ABCA10Q8WWZ4 1543 aa-1.25□□□□□ -2.61
CCDC7-209ENST00000539197 PRUNE2Q8WUY3 3088 aa-1.26□□□□□ -2.61
CCDC7-209ENST00000539197 DEFB131AP59861 70 aa-1.27□□□□□ -2.61
CCDC7-209ENST00000539197 AGLP35573 1532 aa-1.27□□□□□ -2.61
CCDC7-209ENST00000539197 PLNP26678 52 aa-1.28□□□□□ -2.61
CCDC7-209ENST00000539197 MT1MQ8N339 61 aa-1.28□□□□□ -2.61
CCDC7-209ENST00000539197 DEFB4AO15263 64 aa-1.29□□□□□ -2.62
CCDC7-209ENST00000539197 MT2AP02795 61 aa-1.29□□□□□ -2.62
CCDC7-209ENST00000539197 CENPEQ02224 2701 aa-1.3□□□□□ -2.62
CCDC7-209ENST00000539197 SYCP2Q9BX26 1530 aa-1.3□□□□□ -2.62
CCDC7-209ENST00000539197 PRXQ9BXM0 1461 aa-1.31□□□□□ -2.62
CCDC7-209ENST00000539197 ATMQ13315 3056 aa-1.31□□□□□ -2.62
CCDC7-209ENST00000539197 LEAP2Q969E1 77 aa-1.31□□□□□ -2.62
CCDC7-209ENST00000539197 FREM2Q5SZK8 3169 aa-1.33□□□□□ -2.62
CCDC7-209ENST00000539197 LMO7Q8WWI1 1683 aa-1.33□□□□□ -2.62
CCDC7-209ENST00000539197 CRYBG3Q68DQ2 2970 aa-1.34□□□□□ -2.62
CCDC7-209ENST00000539197 SMIM31A0A1B0GVY4 71 aa-1.34□□□□□ -2.62
CCDC7-209ENST00000539197 SMIM2Q9BVW6 85 aa-1.34□□□□□ -2.62
CCDC7-209ENST00000539197 CFAP54Q96N23 3096 aa-1.34□□□□□ -2.62
CCDC7-209ENST00000539197 DEFB136Q30KP8 78 aa-1.38□□□□□ -2.63
CCDC7-209ENST00000539197 LOC400499M0QZD8 3231 aa-1.38□□□□□ -2.63
CCDC7-209ENST00000539197 VPS13CQ709C8 3753 aa-1.39□□□□□ -2.63
CCDC7-209ENST00000539197 MT1BP07438 61 aa-1.4□□□□□ -2.63
CCDC7-209ENST00000539197 DMDP11532 3685 aa-1.4□□□□□ -2.63
CCDC7-209ENST00000539197 CMC2Q9NRP2 79 aa-1.41□□□□□ -2.64
CCDC7-209ENST00000539197 SPEGQ15772 3267 aa-1.42□□□□□ -2.64
CCDC7-209ENST00000539197 EP400Q96L91 3159 aa-1.43□□□□□ -2.64
CCDC7-209ENST00000539197 ABCA5Q8WWZ7 1642 aa-1.43□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms