RNA–Protein interactions for RNA: ENST00000536625.1

KNTC1-209, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 1,178 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-209ENST00000536625 DYNC2H1Q8NCM8 4307 aaKnown RBP2.08□□□□□ -2.08
KNTC1-209ENST00000536625 ANKHD1Q8IWZ3 2542 aaKnown RBP2.08□□□□□ -2.08
KNTC1-209ENST00000536625 BSNQ9UPA5 3926 aa2.07□□□□□ -2.08
KNTC1-209ENST00000536625 ANK2Q01484 3957 aa2.07□□□□□ -2.08
KNTC1-209ENST00000536625 DNAH17Q9UFH2 4485 aa2.07□□□□□ -2.08
KNTC1-209ENST00000536625 DNHD1Q96M86 4753 aa2.06□□□□□ -2.08
KNTC1-209ENST00000536625 J3QKU1 62 aa2.06□□□□□ -2.08
KNTC1-209ENST00000536625 DNAH2Q9P225 4427 aa2.06□□□□□ -2.08
KNTC1-209ENST00000536625 CREBBPQ92793 2442 aa2.06□□□□□ -2.08
KNTC1-209ENST00000536625 VPS13CQ709C8 3753 aa2.05□□□□□ -2.08
KNTC1-209ENST00000536625 MYO9AB2RTY4 2548 aa2.05□□□□□ -2.08
KNTC1-209ENST00000536625 DNAH9Q9NYC9 4486 aa2.05□□□□□ -2.08
KNTC1-209ENST00000536625 ITPR3Q14573 2671 aa2.04□□□□□ -2.08
KNTC1-209ENST00000536625 SRRM2Q9UQ35 2752 aaKnown RBP2.04□□□□□ -2.08
KNTC1-209ENST00000536625 MEGF8Q7Z7M0 2845 aa2.04□□□□□ -2.08
KNTC1-209ENST00000536625 CMYA5Q8N3K9 4069 aa2.04□□□□□ -2.08
KNTC1-209ENST00000536625 LYSTQ99698 3801 aa2.04□□□□□ -2.08
KNTC1-209ENST00000536625 FBN2P35556 2912 aa2.04□□□□□ -2.08
KNTC1-209ENST00000536625 HELZ2Q9BYK8 2649 aaKnown RBP2.04□□□□□ -2.08
KNTC1-209ENST00000536625 Q5VSD8 79 aa2.03□□□□□ -2.08
KNTC1-209ENST00000536625 ZFYVE26Q68DK2 2539 aa2.03□□□□□ -2.08
KNTC1-209ENST00000536625 CSMD3Q7Z407 3707 aa2.03□□□□□ -2.09
KNTC1-209ENST00000536625 RIF1Q5UIP0 2472 aaKnown RBP2.02□□□□□ -2.09
KNTC1-209ENST00000536625 SVEP1Q4LDE5 3571 aa2.01□□□□□ -2.09
KNTC1-209ENST00000536625 HECTD1Q9ULT8 2610 aa2.01□□□□□ -2.09
KNTC1-209ENST00000536625 SONP18583 2426 aaKnown RBP2.01□□□□□ -2.09
KNTC1-209ENST00000536625 TLN1Q9Y490 2541 aaKnown RBP1.99□□□□□ -2.09
KNTC1-209ENST00000536625 CUBNO60494 3623 aa1.99□□□□□ -2.09
KNTC1-209ENST00000536625 DNAH7Q8WXX0 4024 aa1.99□□□□□ -2.09
KNTC1-209ENST00000536625 C9orf92A6NGG3 77 aa1.99□□□□□ -2.09
KNTC1-209ENST00000536625 ADGRG4Q8IZF6 3080 aa1.99□□□□□ -2.09
KNTC1-209ENST00000536625 CFAP46Q8IYW2 2715 aa1.98□□□□□ -2.09
KNTC1-209ENST00000536625 RPS29P62273 56 aaKnown RBP1.98□□□□□ -2.09
KNTC1-209ENST00000536625 DNAH6Q9C0G6 4158 aa1.98□□□□□ -2.09
KNTC1-209ENST00000536625 DNAH3Q8TD57 4116 aa1.98□□□□□ -2.09
KNTC1-209ENST00000536625 TLN2Q9Y4G6 2542 aa1.97□□□□□ -2.09
KNTC1-209ENST00000536625 PRKDCP78527 4128 aaKnown RBP1.97□□□□□ -2.09
KNTC1-209ENST00000536625 TENM4Q6N022 2769 aa1.97□□□□□ -2.09
KNTC1-209ENST00000536625 SACSQ9NZJ4 4579 aa1.97□□□□□ -2.09
KNTC1-209ENST00000536625 HUWE1Q7Z6Z7 4374 aaKnown RBP1.97□□□□□ -2.09
KNTC1-209ENST00000536625 DMBT1Q9UGM3 2413 aaPredicted RBP1.97□□□□□ -2.09
KNTC1-209ENST00000536625 APOBP04114 4563 aaKnown RBP1.96□□□□□ -2.1
KNTC1-209ENST00000536625 JMJD1CQ15652 2540 aa1.96□□□□□ -2.1
KNTC1-209ENST00000536625 COL7A1Q02388 2944 aa1.95□□□□□ -2.1
KNTC1-209ENST00000536625 POLQO75417 2590 aa1.94□□□□□ -2.1
KNTC1-209ENST00000536625 SMR3AQ99954 134 aa1.94□□□□□ -2.1
KNTC1-209ENST00000536625 UTP20O75691 2785 aaKnown RBP1.94□□□□□ -2.1
KNTC1-209ENST00000536625 NBEAL2Q6ZNJ1 2754 aa1.94□□□□□ -2.1
KNTC1-209ENST00000536625 PDZD2O15018 2839 aa1.94□□□□□ -2.1
KNTC1-209ENST00000536625 HECTD4Q9Y4D8 3996 aa1.93□□□□□ -2.1
KNTC1-209ENST00000536625 SETD2Q9BYW2 2564 aaPredicted RBP1.92□□□□□ -2.1
KNTC1-209ENST00000536625 NIPBLQ6KC79 2804 aaeCLIP1.92□□□□□ -2.1
KNTC1-209ENST00000536625 TGP01266 2768 aa1.92□□□□□ -2.1
KNTC1-209ENST00000536625 CSMD2Q7Z408 3487 aa1.92□□□□□ -2.1
KNTC1-209ENST00000536625 CENPEQ02224 2701 aa1.91□□□□□ -2.1
KNTC1-209ENST00000536625 IGSF10Q6WRI0 2623 aa1.91□□□□□ -2.1
KNTC1-209ENST00000536625 MTORP42345 2549 aa1.9□□□□□ -2.11
KNTC1-209ENST00000536625 PKD1P98161 4303 aa1.88□□□□□ -2.11
KNTC1-209ENST00000536625 TNP1P09430 55 aa1.88□□□□□ -2.11
KNTC1-209ENST00000536625 DNAH5Q8TE73 4624 aa1.87□□□□□ -2.11
KNTC1-209ENST00000536625 KMT2AQ03164 3969 aa1.87□□□□□ -2.11
KNTC1-209ENST00000536625 KRTAP4-1Q9BYQ7 146 aa1.87□□□□□ -2.11
KNTC1-209ENST00000536625 CRCT1Q9UGL9 99 aa1.87□□□□□ -2.11
KNTC1-209ENST00000536625 CEP295Q9C0D2 2601 aa1.87□□□□□ -2.11
KNTC1-209ENST00000536625 BIRC6Q9NR09 4857 aa1.86□□□□□ -2.11
KNTC1-209ENST00000536625 NBEAL1Q6ZS30 2694 aa1.85□□□□□ -2.11
KNTC1-209ENST00000536625 LRRK2Q5S007 2527 aa1.85□□□□□ -2.11
KNTC1-209ENST00000536625 FAT3Q8TDW7 4589 aa1.85□□□□□ -2.11
KNTC1-209ENST00000536625 PCLOQ9Y6V0 5065 aa1.84□□□□□ -2.11
KNTC1-209ENST00000536625 VPS13BQ7Z7G8 4022 aa1.84□□□□□ -2.11
KNTC1-209ENST00000536625 HIVEP1P15822 2718 aa1.84□□□□□ -2.12
KNTC1-209ENST00000536625 MXRA5Q9NR99 2828 aa1.84□□□□□ -2.12
KNTC1-209ENST00000536625 ZNF469Q96JG9 3925 aaPredicted RBP1.84□□□□□ -2.12
KNTC1-209ENST00000536625 LRP1Q07954 4544 aaKnown RBP1.83□□□□□ -2.12
KNTC1-209ENST00000536625 UBR4Q5T4S7 5183 aa1.83□□□□□ -2.12
KNTC1-209ENST00000536625 RYR3Q15413 4870 aa1.83□□□□□ -2.12
KNTC1-209ENST00000536625 STAB2Q8WWQ8 2551 aa1.82□□□□□ -2.12
KNTC1-209ENST00000536625 FLNCQ14315 2725 aa1.82□□□□□ -2.12
KNTC1-209ENST00000536625 NOTCH1P46531 2555 aa1.82□□□□□ -2.12
KNTC1-209ENST00000536625 ATRQ13535 2644 aa1.82□□□□□ -2.12
KNTC1-209ENST00000536625 PKD1L1Q8TDX9 2849 aa1.81□□□□□ -2.12
KNTC1-209ENST00000536625 HSPG2P98160 4391 aa1.81□□□□□ -2.12
KNTC1-209ENST00000536625 FLGP20930 4061 aaPredicted RBP1.81□□□□□ -2.12
KNTC1-209ENST00000536625 DYNC1H1Q14204 4646 aaKnown RBP1.81□□□□□ -2.12
KNTC1-209ENST00000536625 STAB1Q9NY15 2570 aa1.81□□□□□ -2.12
KNTC1-209ENST00000536625 PLECQ15149 4684 aaKnown RBP1.8□□□□□ -2.12
KNTC1-209ENST00000536625 PKHD1L1Q86WI1 4243 aa1.8□□□□□ -2.12
KNTC1-209ENST00000536625 USP9YO00507 2555 aaPredicted RBP1.79□□□□□ -2.12
KNTC1-209ENST00000536625 FAT2Q9NYQ8 4349 aa1.78□□□□□ -2.12
KNTC1-209ENST00000536625 ACANP16112 2415 aa1.78□□□□□ -2.12
KNTC1-209ENST00000536625 FLNAP21333 2647 aaKnown RBP1.78□□□□□ -2.12
KNTC1-209ENST00000536625 KMT2CQ8NEZ4 4911 aaKnown RBP1.77□□□□□ -2.13
KNTC1-209ENST00000536625 HYDINQ4G0P3 5121 aa1.76□□□□□ -2.13
KNTC1-209ENST00000536625 KRTAP6-3Q3LI67 103 aa1.76□□□□□ -2.13
KNTC1-209ENST00000536625 EPPK1P58107 5090 aaKnown RBP1.76□□□□□ -2.13
KNTC1-209ENST00000536625 ZANQ9Y493 2812 aa1.76□□□□□ -2.13
KNTC1-209ENST00000536625 ITPR2Q14571 2701 aa1.75□□□□□ -2.13
KNTC1-209ENST00000536625 KRTAP12-4P60329 112 aa1.75□□□□□ -2.13
KNTC1-209ENST00000536625 TNXBP22105 4242 aa1.75□□□□□ -2.13
KNTC1-209ENST00000536625 RYR1P21817 5038 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms