RNA–Protein interactions for RNA: ENST00000533173.1

CYHR1-211, Transcript of cysteine and histidine rich 1, humanhuman

TSL 1 (best)

Gene CYHR1, Length 6,158 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYHR1-211ENST00000533173 KRTAP10-4P60372 401 aaPredicted RBP6.32□□□□□ -1.4
CYHR1-211ENST00000533173 COL7A1Q02388 2944 aa6.26□□□□□ -1.41
CYHR1-211ENST00000533173 KRTAP4-5Q9BYR2 181 aa6.21□□□□□ -1.42
CYHR1-211ENST00000533173 ZNF469Q96JG9 3925 aaPredicted RBP6.16□□□□□ -1.42
CYHR1-211ENST00000533173 DNAH9Q9NYC9 4486 aa6.16□□□□□ -1.42
CYHR1-211ENST00000533173 KRTAP10-5P60370 271 aa6.16□□□□□ -1.42
CYHR1-211ENST00000533173 KRTAP23-1A1A580 65 aa6.15□□□□□ -1.42
CYHR1-211ENST00000533173 DNAH1Q9P2D7 4330 aa6.13□□□□□ -1.43
CYHR1-211ENST00000533173 DNAH10Q8IVF4 4471 aa6.04□□□□□ -1.44
CYHR1-211ENST00000533173 DNAH3Q8TD57 4116 aa6.03□□□□□ -1.44
CYHR1-211ENST00000533173 DNAH2Q9P225 4427 aa5.95□□□□□ -1.46
CYHR1-211ENST00000533173 KRTAP8-1Q8IUC2 63 aa5.94□□□□□ -1.46
CYHR1-211ENST00000533173 PLECQ15149 4684 aaKnown RBP5.93□□□□□ -1.46
CYHR1-211ENST00000533173 DNAH17Q9UFH2 4485 aa5.92□□□□□ -1.46
CYHR1-211ENST00000533173 VPS13DQ5THJ4 4388 aa5.87□□□□□ -1.47
CYHR1-211ENST00000533173 DNAH11Q96DT5 4516 aa5.87□□□□□ -1.47
CYHR1-211ENST00000533173 DNAH5Q8TE73 4624 aa5.85□□□□□ -1.47
CYHR1-211ENST00000533173 KRTAP4-1Q9BYQ7 146 aa5.81□□□□□ -1.48
CYHR1-211ENST00000533173 ANK2Q01484 3957 aa5.81□□□□□ -1.48
CYHR1-211ENST00000533173 DNAH8Q96JB1 4490 aa5.81□□□□□ -1.48
CYHR1-211ENST00000533173 FRAS1Q86XX4 4008 aa5.74□□□□□ -1.49
CYHR1-211ENST00000533173 DYNC2H1Q8NCM8 4307 aaKnown RBP5.72□□□□□ -1.49
CYHR1-211ENST00000533173 STARD9Q9P2P6 4700 aa5.71□□□□□ -1.5
CYHR1-211ENST00000533173 FAT2Q9NYQ8 4349 aa5.69□□□□□ -1.5
CYHR1-211ENST00000533173 CMYA5Q8N3K9 4069 aa5.67□□□□□ -1.5
CYHR1-211ENST00000533173 KMT2AQ03164 3969 aa5.65□□□□□ -1.5
CYHR1-211ENST00000533173 KRTAP19-5Q3LI72 72 aa5.65□□□□□ -1.51
CYHR1-211ENST00000533173 MT1HP80294 61 aa5.63□□□□□ -1.51
CYHR1-211ENST00000533173 LRP1BQ9NZR2 4599 aa5.63□□□□□ -1.51
CYHR1-211ENST00000533173 VPS13BQ7Z7G8 4022 aa5.62□□□□□ -1.51
CYHR1-211ENST00000533173 SACSQ9NZJ4 4579 aa5.62□□□□□ -1.51
CYHR1-211ENST00000533173 PRKDCP78527 4128 aaKnown RBP5.6□□□□□ -1.51
CYHR1-211ENST00000533173 DNAH7Q8WXX0 4024 aa5.58□□□□□ -1.52
CYHR1-211ENST00000533173 MT2AP02795 61 aa5.56□□□□□ -1.52
CYHR1-211ENST00000533173 SPRR2GQ9BYE4 73 aa5.56□□□□□ -1.52
CYHR1-211ENST00000533173 LCE3CQ5T5A8 94 aa5.55□□□□□ -1.52
CYHR1-211ENST00000533173 DYNC1H1Q14204 4646 aaKnown RBP5.55□□□□□ -1.52
CYHR1-211ENST00000533173 KRTAP10-7P60409 375 aaPredicted RBP5.54□□□□□ -1.52
CYHR1-211ENST00000533173 DNAH6Q9C0G6 4158 aa5.54□□□□□ -1.52
CYHR1-211ENST00000533173 FAT1Q14517 4588 aa5.52□□□□□ -1.53
CYHR1-211ENST00000533173 MT1FP04733 61 aa5.5□□□□□ -1.53
CYHR1-211ENST00000533173 SPRR2FQ96RM1 72 aa5.48□□□□□ -1.53
CYHR1-211ENST00000533173 LYSTQ99698 3801 aa5.46□□□□□ -1.53
CYHR1-211ENST00000533173 HECTD4Q9Y4D8 3996 aa5.46□□□□□ -1.54
CYHR1-211ENST00000533173 KRTAP19-4Q3LI73 84 aa5.42□□□□□ -1.54
CYHR1-211ENST00000533173 APOBP04114 4563 aaKnown RBP5.36□□□□□ -1.55
CYHR1-211ENST00000533173 DNHD1Q96M86 4753 aa5.34□□□□□ -1.55
CYHR1-211ENST00000533173 LCE3BQ5TA77 95 aa5.32□□□□□ -1.56
CYHR1-211ENST00000533173 KRTAP17-1Q9BYP8 105 aa5.23□□□□□ -1.57
CYHR1-211ENST00000533173 KRTAP12-4P60329 112 aa5.21□□□□□ -1.58
CYHR1-211ENST00000533173 MT1GP13640 62 aa5.2□□□□□ -1.58
CYHR1-211ENST00000533173 FAT3Q8TDW7 4589 aa5.2□□□□□ -1.58
CYHR1-211ENST00000533173 RYR1P21817 5038 aa5.19□□□□□ -1.58
CYHR1-211ENST00000533173 SPRR2EP22531 72 aa5.19□□□□□ -1.58
CYHR1-211ENST00000533173 SPRR2BP35325 72 aa5.19□□□□□ -1.58
CYHR1-211ENST00000533173 SPRR2AP35326 72 aa5.19□□□□□ -1.58
CYHR1-211ENST00000533173 KRTAP19-1Q8IUB9 90 aa5.16□□□□□ -1.58
CYHR1-211ENST00000533173 MYCBP2O75592 4640 aa5.12□□□□□ -1.59
CYHR1-211ENST00000533173 SPRR5A0A1B0GTR4 108 aa5.12□□□□□ -1.59
CYHR1-211ENST00000533173 KRTAP19-8Q3LI54 63 aa5.11□□□□□ -1.59
CYHR1-211ENST00000533173 MT1XP80297 61 aa5.11□□□□□ -1.59
CYHR1-211ENST00000533173 KRTAP4-8A0A0G2JLE6 195 aa5.07□□□□□ -1.6
CYHR1-211ENST00000533173 KRTAP4-8Q9BYQ9 185 aa5.07□□□□□ -1.6
CYHR1-211ENST00000533173 LRP1Q07954 4544 aaKnown RBP5.05□□□□□ -1.6
CYHR1-211ENST00000533173 SPRR2DP22532 72 aa5.04□□□□□ -1.6
CYHR1-211ENST00000533173 RYR3Q15413 4870 aa5.01□□□□□ -1.61
CYHR1-211ENST00000533173 LCE2BO14633 110 aa5□□□□□ -1.61
CYHR1-211ENST00000533173 MT1BP07438 61 aa5□□□□□ -1.61
CYHR1-211ENST00000533173 HSPG2P98160 4391 aa5□□□□□ -1.61
CYHR1-211ENST00000533173 PKHD1L1Q86WI1 4243 aa4.97□□□□□ -1.61
CYHR1-211ENST00000533173 PKD1P98161 4303 aa4.97□□□□□ -1.61
CYHR1-211ENST00000533173 LPAP08519 4548 aa4.94□□□□□ -1.62
CYHR1-211ENST00000533173 KRTAP9-8Q9BYQ0 159 aa4.94□□□□□ -1.62
CYHR1-211ENST00000533173 KRTAP4-7Q9BYR0 210 aa4.94□□□□□ -1.62
CYHR1-211ENST00000533173 TNXBP22105 4242 aa4.92□□□□□ -1.62
CYHR1-211ENST00000533173 HYDINQ4G0P3 5121 aa4.91□□□□□ -1.62
CYHR1-211ENST00000533173 LCE3DQ9BYE3 92 aa4.9□□□□□ -1.62
CYHR1-211ENST00000533173 PKHD1P08F94 4074 aa4.89□□□□□ -1.63
CYHR1-211ENST00000533173 LCE2CQ5TA81 110 aa4.85□□□□□ -1.63
CYHR1-211ENST00000533173 RYR2Q92736 4967 aa4.83□□□□□ -1.64
CYHR1-211ENST00000533173 KRTAP9-3Q9BYQ3 159 aa4.82□□□□□ -1.64
CYHR1-211ENST00000533173 LCE3EQ5T5B0 92 aa4.8□□□□□ -1.64
CYHR1-211ENST00000533173 LRP2P98164 4655 aa4.75□□□□□ -1.65
CYHR1-211ENST00000533173 KIAA1109Q2LD37 5005 aa4.74□□□□□ -1.65
CYHR1-211ENST00000533173 HERC1Q15751 4861 aa4.74□□□□□ -1.65
CYHR1-211ENST00000533173 PRM1P04553 51 aa4.69□□□□□ -1.66
CYHR1-211ENST00000533173 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
CYHR1-211ENST00000533173 MT1LQ93083 61 aa4.64□□□□□ -1.67
CYHR1-211ENST00000533173 MUC17Q685J3 4493 aa4.64□□□□□ -1.67
CYHR1-211ENST00000533173 LCE2DQ5TA82 110 aaPredicted RBP4.63□□□□□ -1.67
CYHR1-211ENST00000533173 KRTAP19-2Q3LHN2 52 aa4.63□□□□□ -1.67
CYHR1-211ENST00000533173 KRTAP19-3Q7Z4W3 81 aa4.63□□□□□ -1.67
CYHR1-211ENST00000533173 FLGP20930 4061 aaPredicted RBP4.6□□□□□ -1.67
CYHR1-211ENST00000533173 KRTAP4-3Q9BYR4 195 aa4.57□□□□□ -1.68
CYHR1-211ENST00000533173 KMT2CQ8NEZ4 4911 aaKnown RBP4.56□□□□□ -1.68
CYHR1-211ENST00000533173 MT1EP04732 61 aa4.56□□□□□ -1.68
CYHR1-211ENST00000533173 HERC2O95714 4834 aa4.54□□□□□ -1.68
CYHR1-211ENST00000533173 BIRC6Q9NR09 4857 aa4.53□□□□□ -1.68
CYHR1-211ENST00000533173 MT3P25713 68 aa4.47□□□□□ -1.69
CYHR1-211ENST00000533173 KRTAP9-2Q9BYQ4 174 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms