RNA–Protein interactions for RNA: ENST00000530422.1

SCARNA9-201, small Cajal body-specific RNA 9, humanhuman

BASIC

Gene SCARNA9, Length 353 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA9-201ENST00000530422 KRTAP10-3P60369 221 aa3.84□□□□□ -1.79
SCARNA9-201ENST00000530422 BIRC6Q9NR09 4857 aa3.84□□□□□ -1.8
SCARNA9-201ENST00000530422 DNAH3Q8TD57 4116 aa3.83□□□□□ -1.8
SCARNA9-201ENST00000530422 MMP24-AS1A0A0U1RRL7 71 aa3.83□□□□□ -1.8
SCARNA9-201ENST00000530422 Q6ZSA8 131 aa3.83□□□□□ -1.8
SCARNA9-201ENST00000530422 DNAH9Q9NYC9 4486 aa3.82□□□□□ -1.8
SCARNA9-201ENST00000530422 DEFB130BP0DP73 79 aa3.82□□□□□ -1.8
SCARNA9-201ENST00000530422 DEFB130AP0DP74 79 aa3.82□□□□□ -1.8
SCARNA9-201ENST00000530422 RYR2Q92736 4967 aa3.81□□□□□ -1.8
SCARNA9-201ENST00000530422 SPRR1BP22528 89 aa3.8□□□□□ -1.8
SCARNA9-201ENST00000530422 DEFB136Q30KP8 78 aa3.8□□□□□ -1.8
SCARNA9-201ENST00000530422 SACSQ9NZJ4 4579 aa3.8□□□□□ -1.8
SCARNA9-201ENST00000530422 KRTAP5-9P26371 169 aa3.79□□□□□ -1.8
SCARNA9-201ENST00000530422 H1FX-AS1Q4G0G2 97 aa3.79□□□□□ -1.8
SCARNA9-201ENST00000530422 EPPK1P58107 5090 aaKnown RBP3.79□□□□□ -1.8
SCARNA9-201ENST00000530422 DYNC2H1Q8NCM8 4307 aaKnown RBP3.78□□□□□ -1.8
SCARNA9-201ENST00000530422 TENM3Q9P273 2699 aa3.77□□□□□ -1.81
SCARNA9-201ENST00000530422 H3BNG1 76 aa3.77□□□□□ -1.81
SCARNA9-201ENST00000530422 A0A096LPF7 62 aa3.76□□□□□ -1.81
SCARNA9-201ENST00000530422 K7EIL1 84 aa3.76□□□□□ -1.81
SCARNA9-201ENST00000530422 DNAH1Q9P2D7 4330 aa3.76□□□□□ -1.81
SCARNA9-201ENST00000530422 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
SCARNA9-201ENST00000530422 SPART-AS1P0CW21 52 aa3.74□□□□□ -1.81
SCARNA9-201ENST00000530422 C10orf95Q9H7T3 257 aa3.74□□□□□ -1.81
SCARNA9-201ENST00000530422 HUWE1Q7Z6Z7 4374 aaKnown RBP3.72□□□□□ -1.81
SCARNA9-201ENST00000530422 DNAH7Q8WXX0 4024 aa3.72□□□□□ -1.81
SCARNA9-201ENST00000530422 COL7A1Q02388 2944 aa3.71□□□□□ -1.81
SCARNA9-201ENST00000530422 LINC01556Q5JQF7 62 aa3.7□□□□□ -1.82
SCARNA9-201ENST00000530422 SPRR5A0A1B0GTR4 108 aa3.69□□□□□ -1.82
SCARNA9-201ENST00000530422 A0A1B0GVY2 172 aa3.69□□□□□ -1.82
SCARNA9-201ENST00000530422 FLG2Q5D862 2391 aaPredicted RBP3.68□□□□□ -1.82
SCARNA9-201ENST00000530422 LYSTQ99698 3801 aa3.68□□□□□ -1.82
SCARNA9-201ENST00000530422 HYDINQ4G0P3 5121 aa3.67□□□□□ -1.82
SCARNA9-201ENST00000530422 KRTAP13-4Q3LI77 160 aa3.67□□□□□ -1.82
SCARNA9-201ENST00000530422 KRTAP13-3Q3SY46 172 aa3.67□□□□□ -1.82
SCARNA9-201ENST00000530422 STARD9Q9P2P6 4700 aa3.66□□□□□ -1.82
SCARNA9-201ENST00000530422 TENM2Q9NT68 2774 aa3.66□□□□□ -1.82
SCARNA9-201ENST00000530422 HERC2O95714 4834 aa3.66□□□□□ -1.82
SCARNA9-201ENST00000530422 PCLOQ9Y6V0 5065 aa3.65□□□□□ -1.83
SCARNA9-201ENST00000530422 STAB2Q8WWQ8 2551 aa3.64□□□□□ -1.83
SCARNA9-201ENST00000530422 PLECQ15149 4684 aaKnown RBP3.64□□□□□ -1.83
SCARNA9-201ENST00000530422 RYR1P21817 5038 aa3.62□□□□□ -1.83
SCARNA9-201ENST00000530422 HTN3P15516 51 aa3.62□□□□□ -1.83
SCARNA9-201ENST00000530422 PRLHP81277 87 aa3.61□□□□□ -1.83
SCARNA9-201ENST00000530422 DEFB135Q30KP9 77 aa3.6□□□□□ -1.83
SCARNA9-201ENST00000530422 CSMD3Q7Z407 3707 aa3.59□□□□□ -1.83
SCARNA9-201ENST00000530422 FRAS1Q86XX4 4008 aa3.58□□□□□ -1.84
SCARNA9-201ENST00000530422 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
SCARNA9-201ENST00000530422 DNAH10Q8IVF4 4471 aa3.55□□□□□ -1.84
SCARNA9-201ENST00000530422 DEFB4AO15263 64 aa3.55□□□□□ -1.84
SCARNA9-201ENST00000530422 KRTAP10-1P60331 282 aa3.55□□□□□ -1.84
SCARNA9-201ENST00000530422 APLNQ9ULZ1 77 aa3.55□□□□□ -1.84
SCARNA9-201ENST00000530422 HECTD4Q9Y4D8 3996 aa3.55□□□□□ -1.84
SCARNA9-201ENST00000530422 KMT2AQ03164 3969 aa3.54□□□□□ -1.84
SCARNA9-201ENST00000530422 Q5VSD8 79 aa3.54□□□□□ -1.84
SCARNA9-201ENST00000530422 KIAA1109Q2LD37 5005 aa3.54□□□□□ -1.84
SCARNA9-201ENST00000530422 KRTAP13-1Q8IUC0 172 aa3.53□□□□□ -1.84
SCARNA9-201ENST00000530422 A0A096LNI7 61 aa3.52□□□□□ -1.85
SCARNA9-201ENST00000530422 VPS13DQ5THJ4 4388 aa3.52□□□□□ -1.85
SCARNA9-201ENST00000530422 DNAH6Q9C0G6 4158 aa3.5□□□□□ -1.85
SCARNA9-201ENST00000530422 DYNC1H1Q14204 4646 aaKnown RBP3.5□□□□□ -1.85
SCARNA9-201ENST00000530422 ABCA13Q86UQ4 5058 aa3.5□□□□□ -1.85
SCARNA9-201ENST00000530422 PKHD1P08F94 4074 aa3.49□□□□□ -1.85
SCARNA9-201ENST00000530422 FAT2Q9NYQ8 4349 aa3.48□□□□□ -1.85
SCARNA9-201ENST00000530422 DNAH11Q96DT5 4516 aa3.47□□□□□ -1.85
SCARNA9-201ENST00000530422 DNAH2Q9P225 4427 aa3.47□□□□□ -1.85
SCARNA9-201ENST00000530422 S4R3F8 94 aa3.44□□□□□ -1.86
SCARNA9-201ENST00000530422 HSPG2P98160 4391 aa3.44□□□□□ -1.86
SCARNA9-201ENST00000530422 SPINK6Q6UWN8 80 aa3.43□□□□□ -1.86
SCARNA9-201ENST00000530422 KRTAP4-3Q9BYR4 195 aa3.43□□□□□ -1.86
SCARNA9-201ENST00000530422 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
SCARNA9-201ENST00000530422 DNAH17Q9UFH2 4485 aa3.42□□□□□ -1.86
SCARNA9-201ENST00000530422 HERC1Q15751 4861 aa3.42□□□□□ -1.86
SCARNA9-201ENST00000530422 SPINK1P00995 79 aa3.4□□□□□ -1.87
SCARNA9-201ENST00000530422 LRP1BQ9NZR2 4599 aa3.38□□□□□ -1.87
SCARNA9-201ENST00000530422 PKD1P98161 4303 aa3.38□□□□□ -1.87
SCARNA9-201ENST00000530422 APOBP04114 4563 aaKnown RBP3.36□□□□□ -1.87
SCARNA9-201ENST00000530422 DNAH5Q8TE73 4624 aa3.34□□□□□ -1.87
SCARNA9-201ENST00000530422 LCE3AQ5TA76 89 aa3.34□□□□□ -1.87
SCARNA9-201ENST00000530422 KRTAP12-1P59990 96 aa3.3□□□□□ -1.88
SCARNA9-201ENST00000530422 FAT1Q14517 4588 aa3.28□□□□□ -1.88
SCARNA9-201ENST00000530422 UBR4Q5T4S7 5183 aa3.27□□□□□ -1.89
SCARNA9-201ENST00000530422 DMBT1Q9UGM3 2413 aaPredicted RBP3.27□□□□□ -1.89
SCARNA9-201ENST00000530422 MYCBP2O75592 4640 aa3.26□□□□□ -1.89
SCARNA9-201ENST00000530422 KRTAP10-10P60014 251 aa3.26□□□□□ -1.89
SCARNA9-201ENST00000530422 VPS13BQ7Z7G8 4022 aa3.25□□□□□ -1.89
SCARNA9-201ENST00000530422 RPS29P62273 56 aaKnown RBP3.25□□□□□ -1.89
SCARNA9-201ENST00000530422 HMCN2Q8NDA2 5059 aa3.25□□□□□ -1.89
SCARNA9-201ENST00000530422 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
SCARNA9-201ENST00000530422 KRTAP6-3Q3LI67 103 aa3.2□□□□□ -1.9
SCARNA9-201ENST00000530422 A0A0D9SG42 100 aa3.17□□□□□ -1.9
SCARNA9-201ENST00000530422 SRRM2Q9UQ35 2752 aaKnown RBP3.16□□□□□ -1.9
SCARNA9-201ENST00000530422 SMR3BP02814 79 aaPredicted RBP3.16□□□□□ -1.9
SCARNA9-201ENST00000530422 DNAH8Q96JB1 4490 aa3.16□□□□□ -1.9
SCARNA9-201ENST00000530422 M0QZ58 72 aa3.15□□□□□ -1.91
SCARNA9-201ENST00000530422 FAT3Q8TDW7 4589 aa3.13□□□□□ -1.91
SCARNA9-201ENST00000530422 PKHD1L1Q86WI1 4243 aa3.11□□□□□ -1.91
SCARNA9-201ENST00000530422 LRP1Q07954 4544 aaKnown RBP3.11□□□□□ -1.91
SCARNA9-201ENST00000530422 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
SCARNA9-201ENST00000530422 RNF213Q63HN8 5207 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms