RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 HUWE1Q7Z6Z7 4374 aaKnown RBP2.07□□□□□ -2.08
USP47-209ENST00000530041 FASNP49327 2511 aaKnown RBP2.06□□□□□ -2.08
USP47-209ENST00000530041 A0A1B0GU69 56 aa2.06□□□□□ -2.08
USP47-209ENST00000530041 UQCR11O14957 56 aa2.06□□□□□ -2.08
USP47-209ENST00000530041 P0C880 135 aa2.06□□□□□ -2.08
USP47-209ENST00000530041 MIR22HGQ0VDD5 57 aa2.06□□□□□ -2.08
USP47-209ENST00000530041 TPRXLQ17RH7 258 aa2.06□□□□□ -2.08
USP47-209ENST00000530041 TEP1Q99973 2627 aaKnown RBP2.05□□□□□ -2.08
USP47-209ENST00000530041 NUPR2A6NF83 97 aa2.04□□□□□ -2.08
USP47-209ENST00000530041 ATRQ13535 2644 aa2.04□□□□□ -2.08
USP47-209ENST00000530041 SPINK6Q6UWN8 80 aa2.04□□□□□ -2.08
USP47-209ENST00000530041 NSD1Q96L73 2696 aaPredicted RBP2.04□□□□□ -2.08
USP47-209ENST00000530041 ITPR2Q14571 2701 aa2.04□□□□□ -2.08
USP47-209ENST00000530041 DYNC2H1Q8NCM8 4307 aaKnown RBP2.03□□□□□ -2.08
USP47-209ENST00000530041 ANK2Q01484 3957 aa2.03□□□□□ -2.08
USP47-209ENST00000530041 TENM1Q9UKZ4 2725 aa2.03□□□□□ -2.09
USP47-209ENST00000530041 CMYA5Q8N3K9 4069 aa2.02□□□□□ -2.09
USP47-209ENST00000530041 PKD1L1Q8TDX9 2849 aa2.02□□□□□ -2.09
USP47-209ENST00000530041 DNAH10Q8IVF4 4471 aa2.02□□□□□ -2.09
USP47-209ENST00000530041 TENM2Q9NT68 2774 aa2.02□□□□□ -2.09
USP47-209ENST00000530041 TRRAPQ9Y4A5 3859 aa2.01□□□□□ -2.09
USP47-209ENST00000530041 DNAH17Q9UFH2 4485 aa2.01□□□□□ -2.09
USP47-209ENST00000530041 DNAH9Q9NYC9 4486 aa2.01□□□□□ -2.09
USP47-209ENST00000530041 DNAH8Q96JB1 4490 aa2□□□□□ -2.09
USP47-209ENST00000530041 HELZ2Q9BYK8 2649 aaKnown RBP2□□□□□ -2.09
USP47-209ENST00000530041 LY6G6CO95867 125 aa2□□□□□ -2.09
USP47-209ENST00000530041 CSAG1Q6PB30 78 aa2□□□□□ -2.09
USP47-209ENST00000530041 OTOGQ6ZRI0 2925 aa2□□□□□ -2.09
USP47-209ENST00000530041 MAST4O15021 2626 aa1.99□□□□□ -2.09
USP47-209ENST00000530041 FLNBO75369 2602 aaKnown RBP1.99□□□□□ -2.09
USP47-209ENST00000530041 TENM4Q6N022 2769 aa1.99□□□□□ -2.09
USP47-209ENST00000530041 VPS13DQ5THJ4 4388 aa1.98□□□□□ -2.09
USP47-209ENST00000530041 Q6ZSA8 131 aa1.98□□□□□ -2.09
USP47-209ENST00000530041 H0YAA0 97 aa1.97□□□□□ -2.09
USP47-209ENST00000530041 RPS29P62273 56 aaKnown RBP1.97□□□□□ -2.09
USP47-209ENST00000530041 SPINK1P00995 79 aa1.96□□□□□ -2.1
USP47-209ENST00000530041 KRTAP6-3Q3LI67 103 aa1.96□□□□□ -2.1
USP47-209ENST00000530041 PLECQ15149 4684 aaKnown RBP1.96□□□□□ -2.1
USP47-209ENST00000530041 SRRM2Q9UQ35 2752 aaKnown RBP1.95□□□□□ -2.1
USP47-209ENST00000530041 BAHCC1Q9P281 2608 aa1.95□□□□□ -2.1
USP47-209ENST00000530041 HECTD1Q9ULT8 2610 aa1.94□□□□□ -2.1
USP47-209ENST00000530041 H1FX-AS1Q4G0G2 97 aa1.94□□□□□ -2.1
USP47-209ENST00000530041 SACSQ9NZJ4 4579 aa1.93□□□□□ -2.1
USP47-209ENST00000530041 DNAH11Q96DT5 4516 aa1.93□□□□□ -2.1
USP47-209ENST00000530041 NOTCH1P46531 2555 aa1.93□□□□□ -2.1
USP47-209ENST00000530041 STAB1Q9NY15 2570 aa1.93□□□□□ -2.1
USP47-209ENST00000530041 DNAH2Q9P225 4427 aa1.93□□□□□ -2.1
USP47-209ENST00000530041 DNAH6Q9C0G6 4158 aa1.93□□□□□ -2.1
USP47-209ENST00000530041 STAB2Q8WWQ8 2551 aa1.92□□□□□ -2.1
USP47-209ENST00000530041 PRKDCP78527 4128 aaKnown RBP1.91□□□□□ -2.1
USP47-209ENST00000530041 LYSTQ99698 3801 aa1.91□□□□□ -2.1
USP47-209ENST00000530041 NBEAL1Q6ZS30 2694 aa1.91□□□□□ -2.1
USP47-209ENST00000530041 COX6B2Q6YFQ2 88 aa1.9□□□□□ -2.11
USP47-209ENST00000530041 STARD9Q9P2P6 4700 aa1.9□□□□□ -2.11
USP47-209ENST00000530041 DNAH7Q8WXX0 4024 aa1.89□□□□□ -2.11
USP47-209ENST00000530041 HECTD4Q9Y4D8 3996 aa1.89□□□□□ -2.11
USP47-209ENST00000530041 CRCT1Q9UGL9 99 aa1.89□□□□□ -2.11
USP47-209ENST00000530041 COL6A5A8TX70 2615 aa1.89□□□□□ -2.11
USP47-209ENST00000530041 DNAH5Q8TE73 4624 aa1.89□□□□□ -2.11
USP47-209ENST00000530041 FRAS1Q86XX4 4008 aa1.88□□□□□ -2.11
USP47-209ENST00000530041 MGAM2Q2M2H8 2515 aa1.87□□□□□ -2.11
USP47-209ENST00000530041 RPL37P61927 97 aaKnown RBP1.86□□□□□ -2.11
USP47-209ENST00000530041 LRP1BQ9NZR2 4599 aa1.86□□□□□ -2.11
USP47-209ENST00000530041 C9orf92A6NGG3 77 aa1.85□□□□□ -2.11
USP47-209ENST00000530041 KRTAP10-4P60372 401 aaPredicted RBP1.85□□□□□ -2.11
USP47-209ENST00000530041 KRTAP13-4Q3LI77 160 aa1.85□□□□□ -2.11
USP47-209ENST00000530041 CSMD3Q7Z407 3707 aa1.84□□□□□ -2.11
USP47-209ENST00000530041 COL7A1Q02388 2944 aa1.84□□□□□ -2.11
USP47-209ENST00000530041 TGP01266 2768 aa1.83□□□□□ -2.12
USP47-209ENST00000530041 CRIPTQ9P021 101 aa1.83□□□□□ -2.12
USP47-209ENST00000530041 PKHD1L1Q86WI1 4243 aa1.83□□□□□ -2.12
USP47-209ENST00000530041 KMT2AQ03164 3969 aa1.83□□□□□ -2.12
USP47-209ENST00000530041 FBN3Q75N90 2809 aa1.83□□□□□ -2.12
USP47-209ENST00000530041 FLG2Q5D862 2391 aaPredicted RBP1.81□□□□□ -2.12
USP47-209ENST00000530041 INE1O15225 51 aa1.8□□□□□ -2.12
USP47-209ENST00000530041 S4R3F8 94 aa1.8□□□□□ -2.12
USP47-209ENST00000530041 MEGF8Q7Z7M0 2845 aa1.8□□□□□ -2.12
USP47-209ENST00000530041 PKD1P98161 4303 aa1.79□□□□□ -2.12
USP47-209ENST00000530041 A0A0D9SG42 100 aa1.79□□□□□ -2.12
USP47-209ENST00000530041 KRTAP12-1P59990 96 aa1.79□□□□□ -2.12
USP47-209ENST00000530041 C10orf95Q9H7T3 257 aa1.79□□□□□ -2.12
USP47-209ENST00000530041 VPS13BQ7Z7G8 4022 aa1.79□□□□□ -2.12
USP47-209ENST00000530041 FAT2Q9NYQ8 4349 aa1.79□□□□□ -2.12
USP47-209ENST00000530041 SMR3BP02814 79 aaPredicted RBP1.78□□□□□ -2.12
USP47-209ENST00000530041 DYNC1H1Q14204 4646 aaKnown RBP1.78□□□□□ -2.13
USP47-209ENST00000530041 APOBP04114 4563 aaKnown RBP1.78□□□□□ -2.13
USP47-209ENST00000530041 M0QZ58 72 aa1.77□□□□□ -2.13
USP47-209ENST00000530041 KRTAP4-1Q9BYQ7 146 aa1.77□□□□□ -2.13
USP47-209ENST00000530041 PKHD1P08F94 4074 aa1.76□□□□□ -2.13
USP47-209ENST00000530041 LRP1Q07954 4544 aaKnown RBP1.75□□□□□ -2.13
USP47-209ENST00000530041 FAT1Q14517 4588 aa1.74□□□□□ -2.13
USP47-209ENST00000530041 HYDINQ4G0P3 5121 aa1.74□□□□□ -2.13
USP47-209ENST00000530041 FAT3Q8TDW7 4589 aa1.74□□□□□ -2.13
USP47-209ENST00000530041 TNXBP22105 4242 aa1.74□□□□□ -2.13
USP47-209ENST00000530041 DMBT1Q9UGM3 2413 aaPredicted RBP1.72□□□□□ -2.13
USP47-209ENST00000530041 HSPG2P98160 4391 aa1.7□□□□□ -2.14
USP47-209ENST00000530041 KRTAP21-3Q3LHN1 58 aa1.7□□□□□ -2.14
USP47-209ENST00000530041 DNHD1Q96M86 4753 aa1.69□□□□□ -2.14
USP47-209ENST00000530041 MT1HL1P0DM35 61 aa1.69□□□□□ -2.14
USP47-209ENST00000530041 PLAC4Q8WY50 150 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms