RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 KIAA1109Q2LD37 5005 aa0.99□□□□□ -2.25
SVIP-203ENST00000529848 CSMD3Q7Z407 3707 aa0.99□□□□□ -2.25
SVIP-203ENST00000529848 RPL37P61927 97 aaKnown RBP0.99□□□□□ -2.25
SVIP-203ENST00000529848 Q8IZM0 81 aa0.99□□□□□ -2.25
SVIP-203ENST00000529848 LINC00308Q8TCZ7 52 aa0.99□□□□□ -2.25
SVIP-203ENST00000529848 KAAG1Q9UBP8 84 aa0.99□□□□□ -2.25
SVIP-203ENST00000529848 RYR1P21817 5038 aa0.98□□□□□ -2.25
SVIP-203ENST00000529848 ABCA13Q86UQ4 5058 aa0.98□□□□□ -2.25
SVIP-203ENST00000529848 DEFB136Q30KP8 78 aa0.98□□□□□ -2.25
SVIP-203ENST00000529848 H3BSH0 61 aa0.97□□□□□ -2.25
SVIP-203ENST00000529848 I3L2K1 104 aa0.97□□□□□ -2.25
SVIP-203ENST00000529848 IAPPP10997 89 aa0.97□□□□□ -2.25
SVIP-203ENST00000529848 MINOS1Q5TGZ0 78 aa0.97□□□□□ -2.25
SVIP-203ENST00000529848 SMIM2Q9BVW6 85 aa0.97□□□□□ -2.25
SVIP-203ENST00000529848 KMT2AQ03164 3969 aa0.97□□□□□ -2.25
SVIP-203ENST00000529848 DNAH6Q9C0G6 4158 aa0.97□□□□□ -2.25
SVIP-203ENST00000529848 UBR4Q5T4S7 5183 aa0.96□□□□□ -2.26
SVIP-203ENST00000529848 DNAH10Q8IVF4 4471 aa0.96□□□□□ -2.26
SVIP-203ENST00000529848 H0YAA0 97 aa0.96□□□□□ -2.26
SVIP-203ENST00000529848 NDUFA1O15239 70 aa0.96□□□□□ -2.26
SVIP-203ENST00000529848 PLECQ15149 4684 aaKnown RBP0.96□□□□□ -2.26
SVIP-203ENST00000529848 LELP1Q5T871 98 aa0.96□□□□□ -2.26
SVIP-203ENST00000529848 LINC00575Q6W349 94 aa0.96□□□□□ -2.26
SVIP-203ENST00000529848 CNFNQ9BYD5 112 aa0.96□□□□□ -2.26
SVIP-203ENST00000529848 C10orf95Q9H7T3 257 aa0.96□□□□□ -2.26
SVIP-203ENST00000529848 DMBT1Q9UGM3 2413 aaPredicted RBP0.96□□□□□ -2.26
SVIP-203ENST00000529848 PKHD1P08F94 4074 aa0.95□□□□□ -2.26
SVIP-203ENST00000529848 DNAH11Q96DT5 4516 aa0.95□□□□□ -2.26
SVIP-203ENST00000529848 K7EQZ3 153 aa0.95□□□□□ -2.26
SVIP-203ENST00000529848 SPINK13Q1W4C9 94 aa0.95□□□□□ -2.26
SVIP-203ENST00000529848 UBE2DNLQ8IWF7 75 aa0.95□□□□□ -2.26
SVIP-203ENST00000529848 HSPG2P98160 4391 aa0.95□□□□□ -2.26
SVIP-203ENST00000529848 DYNC1H1Q14204 4646 aaKnown RBP0.94□□□□□ -2.26
SVIP-203ENST00000529848 VPS13DQ5THJ4 4388 aa0.94□□□□□ -2.26
SVIP-203ENST00000529848 FAT2Q9NYQ8 4349 aa0.94□□□□□ -2.26
SVIP-203ENST00000529848 RPS27P42677 84 aaKnown RBP0.94□□□□□ -2.26
SVIP-203ENST00000529848 DEFB135Q30KP9 77 aa0.94□□□□□ -2.26
SVIP-203ENST00000529848 ARHGAP5-AS1Q96IT6 56 aa0.94□□□□□ -2.26
SVIP-203ENST00000529848 MRPL34Q9BQ48 92 aaKnown RBP0.94□□□□□ -2.26
SVIP-203ENST00000529848 DNAH2Q9P225 4427 aa0.93□□□□□ -2.26
SVIP-203ENST00000529848 Q5VSD8 79 aa0.93□□□□□ -2.26
SVIP-203ENST00000529848 TTTY10Q9BZA0 68 aa0.93□□□□□ -2.26
SVIP-203ENST00000529848 TP53AIP1Q9HCN2 124 aa0.93□□□□□ -2.26
SVIP-203ENST00000529848 HERC1Q15751 4861 aa0.93□□□□□ -2.26
SVIP-203ENST00000529848 COX6A2Q02221 97 aa0.92□□□□□ -2.26
SVIP-203ENST00000529848 LEAP2Q969E1 77 aa0.92□□□□□ -2.26
SVIP-203ENST00000529848 APLNQ9ULZ1 77 aa0.92□□□□□ -2.26
SVIP-203ENST00000529848 H3BUA1 57 aa0.91□□□□□ -2.26
SVIP-203ENST00000529848 DEFB4AO15263 64 aa0.91□□□□□ -2.26
SVIP-203ENST00000529848 C6orf48Q9UBA6 75 aa0.91□□□□□ -2.26
SVIP-203ENST00000529848 DNAH17Q9UFH2 4485 aa0.91□□□□□ -2.26
SVIP-203ENST00000529848 APOBP04114 4563 aaKnown RBP0.91□□□□□ -2.26
SVIP-203ENST00000529848 LRP1BQ9NZR2 4599 aa0.91□□□□□ -2.26
SVIP-203ENST00000529848 PKD1P98161 4303 aa0.91□□□□□ -2.26
SVIP-203ENST00000529848 MYCBP2O75592 4640 aa0.9□□□□□ -2.27
SVIP-203ENST00000529848 LINC01590Q5TEZ4 76 aa0.9□□□□□ -2.27
SVIP-203ENST00000529848 COX6B2Q6YFQ2 88 aa0.9□□□□□ -2.27
SVIP-203ENST00000529848 USMG5Q96IX5 58 aa0.9□□□□□ -2.27
SVIP-203ENST00000529848 RNF213Q63HN8 5207 aa0.89□□□□□ -2.27
SVIP-203ENST00000529848 HMCN2Q8NDA2 5059 aa0.89□□□□□ -2.27
SVIP-203ENST00000529848 SMR3BP02814 79 aaPredicted RBP0.89□□□□□ -2.27
SVIP-203ENST00000529848 APELAP0DMC3 54 aa0.89□□□□□ -2.27
SVIP-203ENST00000529848 HTN3P15516 51 aa0.89□□□□□ -2.27
SVIP-203ENST00000529848 POLR2KP53803 58 aaKnown RBP0.89□□□□□ -2.27
SVIP-203ENST00000529848 RPL39P62891 51 aaKnown RBP0.89□□□□□ -2.27
SVIP-203ENST00000529848 PIGYQ3MUY2 71 aa0.89□□□□□ -2.27
SVIP-203ENST00000529848 WFDC13Q8IUB5 93 aa0.89□□□□□ -2.27
SVIP-203ENST00000529848 DEFB104AQ8WTQ1 72 aa0.89□□□□□ -2.27
SVIP-203ENST00000529848 DNAH5Q8TE73 4624 aa0.88□□□□□ -2.27
SVIP-203ENST00000529848 VPS13BQ7Z7G8 4022 aa0.88□□□□□ -2.27
SVIP-203ENST00000529848 SPART-AS1P0CW21 52 aa0.88□□□□□ -2.27
SVIP-203ENST00000529848 H1FX-AS1Q4G0G2 97 aa0.88□□□□□ -2.27
SVIP-203ENST00000529848 RPL39P5Q59GN2 51 aa0.88□□□□□ -2.27
SVIP-203ENST00000529848 RPL39LQ96EH5 51 aaKnown RBP0.88□□□□□ -2.27
SVIP-203ENST00000529848 DEFB130BP0DP73 79 aa0.87□□□□□ -2.27
SVIP-203ENST00000529848 DEFB130AP0DP74 79 aa0.87□□□□□ -2.27
SVIP-203ENST00000529848 SPRR1AP35321 89 aa0.87□□□□□ -2.27
SVIP-203ENST00000529848 DEFB131AP59861 70 aa0.87□□□□□ -2.27
SVIP-203ENST00000529848 WFDC10BQ8IUB3 73 aa0.87□□□□□ -2.27
SVIP-203ENST00000529848 RHPN1-AS1Q9BWJ2 59 aa0.87□□□□□ -2.27
SVIP-203ENST00000529848 PKHD1L1Q86WI1 4243 aa0.87□□□□□ -2.27
SVIP-203ENST00000529848 FAT1Q14517 4588 aa0.86□□□□□ -2.27
SVIP-203ENST00000529848 IGLV5-48A0A075B6I7 105 aa0.86□□□□□ -2.27
SVIP-203ENST00000529848 SRRM2Q9UQ35 2752 aaKnown RBP0.85□□□□□ -2.27
SVIP-203ENST00000529848 KLK9Q2XQG4 91 aa0.85□□□□□ -2.27
SVIP-203ENST00000529848 SPINK9Q5DT21 86 aa0.85□□□□□ -2.27
SVIP-203ENST00000529848 TMEM167AQ8TBQ9 72 aa0.85□□□□□ -2.27
SVIP-203ENST00000529848 PRO0255Q9UI72 69 aa0.85□□□□□ -2.27
SVIP-203ENST00000529848 TNXBP22105 4242 aa0.84□□□□□ -2.27
SVIP-203ENST00000529848 FAT3Q8TDW7 4589 aa0.84□□□□□ -2.27
SVIP-203ENST00000529848 MMP24-AS1A0A0U1RRL7 71 aa0.84□□□□□ -2.27
SVIP-203ENST00000529848 H3BNG1 76 aa0.84□□□□□ -2.27
SVIP-203ENST00000529848 K7EIM0 57 aa0.84□□□□□ -2.27
SVIP-203ENST00000529848 MT1HL1P0DM35 61 aa0.84□□□□□ -2.27
SVIP-203ENST00000529848 PRCDQ00LT1 54 aa0.84□□□□□ -2.27
SVIP-203ENST00000529848 LRP1Q07954 4544 aaKnown RBP0.84□□□□□ -2.28
SVIP-203ENST00000529848 LRP2P98164 4655 aa0.83□□□□□ -2.28
SVIP-203ENST00000529848 HTN1P15515 57 aa0.83□□□□□ -2.28
SVIP-203ENST00000529848 WT1-ASQ06250 92 aa0.83□□□□□ -2.28
SVIP-203ENST00000529848 DEFB105AQ8NG35 78 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms