RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 NEBP20929 6669 aa1.86□□□□□ -2.11
PTPRC-213ENST00000529828 MUC12Q9UKN1 5478 aa1.85□□□□□ -2.11
PTPRC-213ENST00000529828 CHKB-CPT1BH3BT56 60 aa1.85□□□□□ -2.11
PTPRC-213ENST00000529828 PDE6GP18545 87 aa1.85□□□□□ -2.11
PTPRC-213ENST00000529828 RPL37P61927 97 aaKnown RBP1.85□□□□□ -2.11
PTPRC-213ENST00000529828 Q6ZRX8 168 aa1.85□□□□□ -2.11
PTPRC-213ENST00000529828 Q1RN00 199 aa1.85□□□□□ -2.11
PTPRC-213ENST00000529828 LCE1EQ5T753 118 aa1.85□□□□□ -2.11
PTPRC-213ENST00000529828 CASC2Q6XLA1 102 aa1.85□□□□□ -2.11
PTPRC-213ENST00000529828 TRBV7-4A0A0J9YYF1 115 aa1.84□□□□□ -2.11
PTPRC-213ENST00000529828 TRAV23DV6A0A075B6W5 121 aa1.84□□□□□ -2.12
PTPRC-213ENST00000529828 A0A087WVE0 104 aa1.84□□□□□ -2.12
PTPRC-213ENST00000529828 LOC101927531A0A1B0GV80 90 aa1.84□□□□□ -2.12
PTPRC-213ENST00000529828 MUSTN1Q8IVN3 82 aa1.84□□□□□ -2.12
PTPRC-213ENST00000529828 IGKV3D-7A0A0C4DH55 119 aa1.83□□□□□ -2.12
PTPRC-213ENST00000529828 A0A0G2JQZ4 141 aa1.83□□□□□ -2.12
PTPRC-213ENST00000529828 ROMO1P60602 79 aa1.83□□□□□ -2.12
PTPRC-213ENST00000529828 TMEM254Q8TBM7 123 aa1.83□□□□□ -2.12
PTPRC-213ENST00000529828 SNURFQ9Y675 71 aa1.83□□□□□ -2.12
PTPRC-213ENST00000529828 KRTAP23-1A1A580 65 aa1.83□□□□□ -2.12
PTPRC-213ENST00000529828 A6NED7 52 aa1.83□□□□□ -2.12
PTPRC-213ENST00000529828 K7ERS5 55 aa1.83□□□□□ -2.12
PTPRC-213ENST00000529828 LINC00308Q8TCZ7 52 aa1.83□□□□□ -2.12
PTPRC-213ENST00000529828 MT2AP02795 61 aa1.82□□□□□ -2.12
PTPRC-213ENST00000529828 LITAFQ99732 161 aa1.82□□□□□ -2.12
PTPRC-213ENST00000529828 OCR1Q9BZK8 76 aa1.82□□□□□ -2.12
PTPRC-213ENST00000529828 OBSCNQ5VST9 7968 aa1.82□□□□□ -2.12
PTPRC-213ENST00000529828 JMJD7-PLA2G4BH0Y9G9 81 aa1.82□□□□□ -2.12
PTPRC-213ENST00000529828 DEFB105AQ8NG35 78 aa1.82□□□□□ -2.12
PTPRC-213ENST00000529828 OBSCN-AS1Q96MR7 158 aa1.82□□□□□ -2.12
PTPRC-213ENST00000529828 C8orf17Q9NRJ1 99 aa1.82□□□□□ -2.12
PTPRC-213ENST00000529828 MT1FP04733 61 aa1.81□□□□□ -2.12
PTPRC-213ENST00000529828 BAALC-AS2P0C853 105 aa1.81□□□□□ -2.12
PTPRC-213ENST00000529828 ELOF1P60002 83 aaKnown RBP1.81□□□□□ -2.12
PTPRC-213ENST00000529828 C1orf64Q8NEQ6 169 aa1.81□□□□□ -2.12
PTPRC-213ENST00000529828 UBL5Q9BZL1 73 aa1.81□□□□□ -2.12
PTPRC-213ENST00000529828 LINC00846Q9NV44 126 aa1.81□□□□□ -2.12
PTPRC-213ENST00000529828 SPRR1BP22528 89 aa1.8□□□□□ -2.12
PTPRC-213ENST00000529828 LUZP6Q538Z0 58 aa1.8□□□□□ -2.12
PTPRC-213ENST00000529828 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.8□□□□□ -2.12
PTPRC-213ENST00000529828 SMIM29Q86T20 159 aa1.8□□□□□ -2.12
PTPRC-213ENST00000529828 DHRS4-AS1Q9P1J3 65 aa1.8□□□□□ -2.12
PTPRC-213ENST00000529828 NDUFB1O75438 58 aa1.8□□□□□ -2.12
PTPRC-213ENST00000529828 Q8N9P0 234 aaPredicted RBP1.8□□□□□ -2.12
PTPRC-213ENST00000529828 C14orf132Q9NPU4 83 aa1.8□□□□□ -2.12
PTPRC-213ENST00000529828 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
PTPRC-213ENST00000529828 A8MU10 97 aa1.79□□□□□ -2.12
PTPRC-213ENST00000529828 NREPQ16612 68 aa1.79□□□□□ -2.12
PTPRC-213ENST00000529828 CAMK2N1Q7Z7J9 78 aa1.79□□□□□ -2.12
PTPRC-213ENST00000529828 MDN1Q9NU22 5596 aa1.79□□□□□ -2.12
PTPRC-213ENST00000529828 KRTAP10-10P60014 251 aa1.79□□□□□ -2.12
PTPRC-213ENST00000529828 ADM2Q7Z4H4 148 aa1.79□□□□□ -2.12
PTPRC-213ENST00000529828 A8MWP4 228 aa1.78□□□□□ -2.12
PTPRC-213ENST00000529828 LCE1AQ5T7P2 110 aa1.78□□□□□ -2.12
PTPRC-213ENST00000529828 Q6ZQT0 140 aa1.78□□□□□ -2.12
PTPRC-213ENST00000529828 PRAC1Q96KF2 57 aa1.78□□□□□ -2.12
PTPRC-213ENST00000529828 PRR15LQ9BU68 103 aa1.78□□□□□ -2.12
PTPRC-213ENST00000529828 A0A087WSZ3 146 aa1.78□□□□□ -2.13
PTPRC-213ENST00000529828 COX7BP24311 80 aa1.78□□□□□ -2.13
PTPRC-213ENST00000529828 ORMDL1Q9P0S3 153 aa1.78□□□□□ -2.13
PTPRC-213ENST00000529828 LOC110117498A0A087WWA1 95 aa1.77□□□□□ -2.13
PTPRC-213ENST00000529828 BPY2O14599 106 aa1.77□□□□□ -2.13
PTPRC-213ENST00000529828 MIR22HGQ0VDD5 57 aa1.77□□□□□ -2.13
PTPRC-213ENST00000529828 KRTAP6-3Q3LI67 103 aa1.77□□□□□ -2.13
PTPRC-213ENST00000529828 Q96NJ1 140 aa1.77□□□□□ -2.13
PTPRC-213ENST00000529828 KRTAP19-6Q3LI70 58 aa1.76□□□□□ -2.13
PTPRC-213ENST00000529828 LINC00575Q6W349 94 aa1.76□□□□□ -2.13
PTPRC-213ENST00000529828 SPANXA2-OT1Q8N9U9 137 aa1.75□□□□□ -2.13
PTPRC-213ENST00000529828 C20orf166-AS1Q96NR2 134 aa1.75□□□□□ -2.13
PTPRC-213ENST00000529828 H3BPC8 53 aa1.75□□□□□ -2.13
PTPRC-213ENST00000529828 LINC01558Q9Y6Z2 57 aa1.75□□□□□ -2.13
PTPRC-213ENST00000529828 IGLV5-48A0A075B6I7 105 aa1.74□□□□□ -2.13
PTPRC-213ENST00000529828 IGFL1Q6UW32 110 aa1.74□□□□□ -2.13
PTPRC-213ENST00000529828 SMIM11BQ8TCY0 68 aa1.74□□□□□ -2.13
PTPRC-213ENST00000529828 LINC00208Q96KT6 92 aa1.74□□□□□ -2.13
PTPRC-213ENST00000529828 KMT2DO14686 5537 aa1.74□□□□□ -2.13
PTPRC-213ENST00000529828 CSAG1Q6PB30 78 aa1.74□□□□□ -2.13
PTPRC-213ENST00000529828 ZCCHC13Q8WW36 166 aaKnown RBP1.74□□□□□ -2.13
PTPRC-213ENST00000529828 A0A1W2PNM2 257 aa1.73□□□□□ -2.13
PTPRC-213ENST00000529828 A0A1B0GVX0 72 aa1.73□□□□□ -2.13
PTPRC-213ENST00000529828 A8MUU9 505 aa1.72□□□□□ -2.13
PTPRC-213ENST00000529828 DSCR10P59022 87 aa1.72□□□□□ -2.13
PTPRC-213ENST00000529828 KRTAP20-1Q3LI63 56 aa1.72□□□□□ -2.13
PTPRC-213ENST00000529828 DMAC1Q96GE9 116 aa1.72□□□□□ -2.13
PTPRC-213ENST00000529828 P0C880 135 aa1.72□□□□□ -2.13
PTPRC-213ENST00000529828 HRES1P13985 223 aa1.72□□□□□ -2.13
PTPRC-213ENST00000529828 KRTAP2-2Q9BYT5 123 aa1.71□□□□□ -2.14
PTPRC-213ENST00000529828 H0Y9P7 68 aa1.71□□□□□ -2.14
PTPRC-213ENST00000529828 Q6ZQY7 126 aa1.71□□□□□ -2.14
PTPRC-213ENST00000529828 KRTAP25-1Q3LHN0 102 aa1.7□□□□□ -2.14
PTPRC-213ENST00000529828 UQCR11O14957 56 aa1.69□□□□□ -2.14
PTPRC-213ENST00000529828 SPATA8Q6RVD6 105 aa1.69□□□□□ -2.14
PTPRC-213ENST00000529828 NDUFAF8A1L188 74 aa1.68□□□□□ -2.14
PTPRC-213ENST00000529828 SPINK7P58062 85 aa1.68□□□□□ -2.14
PTPRC-213ENST00000529828 TP53AIP1Q9HCN2 124 aa1.67□□□□□ -2.14
PTPRC-213ENST00000529828 IGKV4-1P06312 121 aa1.66□□□□□ -2.14
PTPRC-213ENST00000529828 DEFB116Q30KQ4 102 aa1.66□□□□□ -2.14
PTPRC-213ENST00000529828 Q5W150 140 aa1.66□□□□□ -2.14
PTPRC-213ENST00000529828 COA5Q86WW8 74 aa1.66□□□□□ -2.14
PTPRC-213ENST00000529828 WFDC13Q8IUB5 93 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms