RNA–Protein interactions for RNA: ENST00000525964.6

NCAPD3-203, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 1 (best)

Gene NCAPD3, Length 5,025 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-203ENST00000525964 CRCT1Q9UGL9 99 aa6.3□□□□□ -1.4
NCAPD3-203ENST00000525964 KRTAP12-3P60328 96 aa6.28□□□□□ -1.4
NCAPD3-203ENST00000525964 KRTAP23-1A1A580 65 aa6.23□□□□□ -1.41
NCAPD3-203ENST00000525964 INE1O15225 51 aa6.23□□□□□ -1.41
NCAPD3-203ENST00000525964 DNAH9Q9NYC9 4486 aa6.16□□□□□ -1.42
NCAPD3-203ENST00000525964 PLECQ15149 4684 aaKnown RBP6.14□□□□□ -1.43
NCAPD3-203ENST00000525964 LYSTQ99698 3801 aa6.14□□□□□ -1.43
NCAPD3-203ENST00000525964 CMYA5Q8N3K9 4069 aa6.13□□□□□ -1.43
NCAPD3-203ENST00000525964 LCE3AQ5TA76 89 aa6.13□□□□□ -1.43
NCAPD3-203ENST00000525964 DNAH1Q9P2D7 4330 aa6.1□□□□□ -1.43
NCAPD3-203ENST00000525964 DNAH3Q8TD57 4116 aa6.1□□□□□ -1.43
NCAPD3-203ENST00000525964 LORP23490 312 aaPredicted RBP6.08□□□□□ -1.44
NCAPD3-203ENST00000525964 KRTAP8-1Q8IUC2 63 aa6.06□□□□□ -1.44
NCAPD3-203ENST00000525964 STARD9Q9P2P6 4700 aa6□□□□□ -1.45
NCAPD3-203ENST00000525964 DNAH7Q8WXX0 4024 aa5.99□□□□□ -1.45
NCAPD3-203ENST00000525964 VPS13DQ5THJ4 4388 aa5.96□□□□□ -1.45
NCAPD3-203ENST00000525964 DNAH8Q96JB1 4490 aa5.95□□□□□ -1.46
NCAPD3-203ENST00000525964 ALMS1Q8TCU4 4167 aa5.93□□□□□ -1.46
NCAPD3-203ENST00000525964 DNAH5Q8TE73 4624 aa5.91□□□□□ -1.46
NCAPD3-203ENST00000525964 DNAH17Q9UFH2 4485 aa5.91□□□□□ -1.46
NCAPD3-203ENST00000525964 KMT2AQ03164 3969 aa5.91□□□□□ -1.46
NCAPD3-203ENST00000525964 DNAH11Q96DT5 4516 aa5.91□□□□□ -1.46
NCAPD3-203ENST00000525964 FRAS1Q86XX4 4008 aa5.9□□□□□ -1.46
NCAPD3-203ENST00000525964 PRKDCP78527 4128 aaKnown RBP5.9□□□□□ -1.47
NCAPD3-203ENST00000525964 MT1HP80294 61 aa5.88□□□□□ -1.47
NCAPD3-203ENST00000525964 KRTAP4-1Q9BYQ7 146 aa5.87□□□□□ -1.47
NCAPD3-203ENST00000525964 DYNC2H1Q8NCM8 4307 aaKnown RBP5.85□□□□□ -1.47
NCAPD3-203ENST00000525964 KRTAP10-5P60370 271 aa5.84□□□□□ -1.47
NCAPD3-203ENST00000525964 HECTD4Q9Y4D8 3996 aa5.83□□□□□ -1.48
NCAPD3-203ENST00000525964 DNAH2Q9P225 4427 aa5.83□□□□□ -1.48
NCAPD3-203ENST00000525964 MT2AP02795 61 aa5.82□□□□□ -1.48
NCAPD3-203ENST00000525964 LRP1BQ9NZR2 4599 aa5.79□□□□□ -1.48
NCAPD3-203ENST00000525964 SPRR2GQ9BYE4 73 aa5.78□□□□□ -1.48
NCAPD3-203ENST00000525964 DNAH6Q9C0G6 4158 aa5.76□□□□□ -1.49
NCAPD3-203ENST00000525964 FAT1Q14517 4588 aa5.75□□□□□ -1.49
NCAPD3-203ENST00000525964 DNHD1Q96M86 4753 aa5.71□□□□□ -1.5
NCAPD3-203ENST00000525964 MT1FP04733 61 aa5.66□□□□□ -1.5
NCAPD3-203ENST00000525964 VPS13BQ7Z7G8 4022 aa5.66□□□□□ -1.5
NCAPD3-203ENST00000525964 SPRR2FQ96RM1 72 aa5.63□□□□□ -1.51
NCAPD3-203ENST00000525964 RYR1P21817 5038 aa5.61□□□□□ -1.51
NCAPD3-203ENST00000525964 KRTAP10-7P60409 375 aaPredicted RBP5.61□□□□□ -1.51
NCAPD3-203ENST00000525964 DYNC1H1Q14204 4646 aaKnown RBP5.57□□□□□ -1.52
NCAPD3-203ENST00000525964 HYDINQ4G0P3 5121 aa5.56□□□□□ -1.52
NCAPD3-203ENST00000525964 KRTAP19-4Q3LI73 84 aa5.54□□□□□ -1.52
NCAPD3-203ENST00000525964 KRTAP19-5Q3LI72 72 aa5.52□□□□□ -1.53
NCAPD3-203ENST00000525964 SACSQ9NZJ4 4579 aa5.5□□□□□ -1.53
NCAPD3-203ENST00000525964 FAT2Q9NYQ8 4349 aa5.48□□□□□ -1.53
NCAPD3-203ENST00000525964 PKHD1P08F94 4074 aa5.47□□□□□ -1.53
NCAPD3-203ENST00000525964 PKD1P98161 4303 aa5.46□□□□□ -1.54
NCAPD3-203ENST00000525964 LCE3CQ5T5A8 94 aa5.43□□□□□ -1.54
NCAPD3-203ENST00000525964 KRTAP19-8Q3LI54 63 aa5.38□□□□□ -1.55
NCAPD3-203ENST00000525964 MYCBP2O75592 4640 aa5.37□□□□□ -1.55
NCAPD3-203ENST00000525964 LRP1Q07954 4544 aaKnown RBP5.34□□□□□ -1.55
NCAPD3-203ENST00000525964 APOBP04114 4563 aaKnown RBP5.34□□□□□ -1.55
NCAPD3-203ENST00000525964 KRTAP19-1Q8IUB9 90 aa5.32□□□□□ -1.56
NCAPD3-203ENST00000525964 KIAA1109Q2LD37 5005 aa5.29□□□□□ -1.56
NCAPD3-203ENST00000525964 SPRR2EP22531 72 aa5.27□□□□□ -1.57
NCAPD3-203ENST00000525964 SPRR2BP35325 72 aa5.27□□□□□ -1.57
NCAPD3-203ENST00000525964 SPRR2AP35326 72 aa5.27□□□□□ -1.57
NCAPD3-203ENST00000525964 RYR3Q15413 4870 aa5.26□□□□□ -1.57
NCAPD3-203ENST00000525964 FAT3Q8TDW7 4589 aa5.24□□□□□ -1.57
NCAPD3-203ENST00000525964 RYR2Q92736 4967 aa5.2□□□□□ -1.58
NCAPD3-203ENST00000525964 KRTAP17-1Q9BYP8 105 aa5.18□□□□□ -1.58
NCAPD3-203ENST00000525964 PKHD1L1Q86WI1 4243 aa5.18□□□□□ -1.58
NCAPD3-203ENST00000525964 MT1XP80297 61 aa5.16□□□□□ -1.58
NCAPD3-203ENST00000525964 MT1BP07438 61 aa5.14□□□□□ -1.59
NCAPD3-203ENST00000525964 KMT2CQ8NEZ4 4911 aaKnown RBP5.13□□□□□ -1.59
NCAPD3-203ENST00000525964 HSPG2P98160 4391 aa5.13□□□□□ -1.59
NCAPD3-203ENST00000525964 KRTAP9-8Q9BYQ0 159 aa5.12□□□□□ -1.59
NCAPD3-203ENST00000525964 SPRR2DP22532 72 aa5.11□□□□□ -1.59
NCAPD3-203ENST00000525964 LCE2BO14633 110 aa5.1□□□□□ -1.59
NCAPD3-203ENST00000525964 KRTAP12-4P60329 112 aa5.07□□□□□ -1.6
NCAPD3-203ENST00000525964 LRP2P98164 4655 aa5.07□□□□□ -1.6
NCAPD3-203ENST00000525964 MT1GP13640 62 aa5.07□□□□□ -1.6
NCAPD3-203ENST00000525964 TNXBP22105 4242 aa5.07□□□□□ -1.6
NCAPD3-203ENST00000525964 LCE3BQ5TA77 95 aa5.05□□□□□ -1.6
NCAPD3-203ENST00000525964 KRTAP9-3Q9BYQ3 159 aa5.02□□□□□ -1.61
NCAPD3-203ENST00000525964 HERC1Q15751 4861 aa5.02□□□□□ -1.61
NCAPD3-203ENST00000525964 HERC2O95714 4834 aa5□□□□□ -1.61
NCAPD3-203ENST00000525964 LCE2CQ5TA81 110 aa5□□□□□ -1.61
NCAPD3-203ENST00000525964 KRTAP4-8A0A0G2JLE6 195 aa4.97□□□□□ -1.61
NCAPD3-203ENST00000525964 KRTAP4-8Q9BYQ9 185 aa4.97□□□□□ -1.61
NCAPD3-203ENST00000525964 LPAP08519 4548 aa4.96□□□□□ -1.62
NCAPD3-203ENST00000525964 PCLOQ9Y6V0 5065 aa4.96□□□□□ -1.62
NCAPD3-203ENST00000525964 BIRC6Q9NR09 4857 aa4.94□□□□□ -1.62
NCAPD3-203ENST00000525964 EPPK1P58107 5090 aaKnown RBP4.87□□□□□ -1.63
NCAPD3-203ENST00000525964 KRTAP19-3Q7Z4W3 81 aa4.84□□□□□ -1.64
NCAPD3-203ENST00000525964 LCE3DQ9BYE3 92 aa4.82□□□□□ -1.64
NCAPD3-203ENST00000525964 SYNE1Q8NF91 8797 aaKnown RBP4.81□□□□□ -1.64
NCAPD3-203ENST00000525964 SPRR5A0A1B0GTR4 108 aa4.79□□□□□ -1.64
NCAPD3-203ENST00000525964 ABCA13Q86UQ4 5058 aa4.77□□□□□ -1.65
NCAPD3-203ENST00000525964 LCE3EQ5T5B0 92 aa4.75□□□□□ -1.65
NCAPD3-203ENST00000525964 MT1LQ93083 61 aa4.74□□□□□ -1.65
NCAPD3-203ENST00000525964 KRTAP19-2Q3LHN2 52 aa4.7□□□□□ -1.66
NCAPD3-203ENST00000525964 LCE2DQ5TA82 110 aaPredicted RBP4.7□□□□□ -1.66
NCAPD3-203ENST00000525964 MT1EP04732 61 aa4.7□□□□□ -1.66
NCAPD3-203ENST00000525964 KRTAP19-6Q3LI70 58 aa4.63□□□□□ -1.67
NCAPD3-203ENST00000525964 KRTAP4-7Q9BYR0 210 aa4.61□□□□□ -1.67
NCAPD3-203ENST00000525964 MUC17Q685J3 4493 aa4.59□□□□□ -1.68
NCAPD3-203ENST00000525964 KRTAP9-2Q9BYQ4 174 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms