RNA–Protein interactions for RNA: ENST00000524238.3

HMBOX1-211, Transcript of homeobox containing 1, humanhuman

TSL 2 BASIC

Gene HMBOX1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-211ENST00000524238 STARD9Q9P2P6 4700 aa3.94□□□□□ -1.78
HMBOX1-211ENST00000524238 DNAH11Q96DT5 4516 aa3.93□□□□□ -1.78
HMBOX1-211ENST00000524238 KRTAP10-6P60371 365 aaPredicted RBP3.92□□□□□ -1.78
HMBOX1-211ENST00000524238 TPRXLQ17RH7 258 aa3.91□□□□□ -1.78
HMBOX1-211ENST00000524238 KRTAP4-2Q9BYR5 136 aa3.91□□□□□ -1.78
HMBOX1-211ENST00000524238 DNAH6Q9C0G6 4158 aa3.91□□□□□ -1.78
HMBOX1-211ENST00000524238 KRTAP4-9Q9BYQ8 210 aa3.9□□□□□ -1.78
HMBOX1-211ENST00000524238 FBN3Q75N90 2809 aa3.9□□□□□ -1.79
HMBOX1-211ENST00000524238 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.79
HMBOX1-211ENST00000524238 KMT2AQ03164 3969 aa3.89□□□□□ -1.79
HMBOX1-211ENST00000524238 A0A0D9SG42 100 aa3.89□□□□□ -1.79
HMBOX1-211ENST00000524238 S4R3F8 94 aa3.89□□□□□ -1.79
HMBOX1-211ENST00000524238 DNAH5Q8TE73 4624 aa3.88□□□□□ -1.79
HMBOX1-211ENST00000524238 KRTAP13-4Q3LI77 160 aa3.87□□□□□ -1.79
HMBOX1-211ENST00000524238 KRTAP19-1Q8IUB9 90 aa3.86□□□□□ -1.79
HMBOX1-211ENST00000524238 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
HMBOX1-211ENST00000524238 KRTAP5-3Q6L8H2 238 aa3.84□□□□□ -1.79
HMBOX1-211ENST00000524238 FLG2Q5D862 2391 aaPredicted RBP3.84□□□□□ -1.79
HMBOX1-211ENST00000524238 SACSQ9NZJ4 4579 aa3.82□□□□□ -1.8
HMBOX1-211ENST00000524238 M0QZ58 72 aa3.82□□□□□ -1.8
HMBOX1-211ENST00000524238 LRP1BQ9NZR2 4599 aa3.82□□□□□ -1.8
HMBOX1-211ENST00000524238 C10orf95Q9H7T3 257 aa3.81□□□□□ -1.8
HMBOX1-211ENST00000524238 VPS13BQ7Z7G8 4022 aa3.81□□□□□ -1.8
HMBOX1-211ENST00000524238 KRTAP9-8Q9BYQ0 159 aa3.8□□□□□ -1.8
HMBOX1-211ENST00000524238 KRTAP12-1P59990 96 aa3.78□□□□□ -1.8
HMBOX1-211ENST00000524238 KRTAP12-2P59991 146 aa3.78□□□□□ -1.8
HMBOX1-211ENST00000524238 PKD1P98161 4303 aa3.78□□□□□ -1.8
HMBOX1-211ENST00000524238 SMR3BP02814 79 aaPredicted RBP3.77□□□□□ -1.81
HMBOX1-211ENST00000524238 KRTAP10-4P60372 401 aaPredicted RBP3.76□□□□□ -1.81
HMBOX1-211ENST00000524238 PKHD1L1Q86WI1 4243 aa3.74□□□□□ -1.81
HMBOX1-211ENST00000524238 A0A0A0MQY5 61 aa3.73□□□□□ -1.81
HMBOX1-211ENST00000524238 FAT2Q9NYQ8 4349 aa3.72□□□□□ -1.81
HMBOX1-211ENST00000524238 KRTAP4-5Q9BYR2 181 aa3.7□□□□□ -1.82
HMBOX1-211ENST00000524238 KRTAP10-8P60410 259 aa3.7□□□□□ -1.82
HMBOX1-211ENST00000524238 PKHD1P08F94 4074 aa3.69□□□□□ -1.82
HMBOX1-211ENST00000524238 A0A1B0GVY2 172 aa3.69□□□□□ -1.82
HMBOX1-211ENST00000524238 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
HMBOX1-211ENST00000524238 DMBT1Q9UGM3 2413 aaPredicted RBP3.67□□□□□ -1.82
HMBOX1-211ENST00000524238 PLAC4Q8WY50 150 aa3.67□□□□□ -1.82
HMBOX1-211ENST00000524238 APOBP04114 4563 aaKnown RBP3.66□□□□□ -1.82
HMBOX1-211ENST00000524238 PP632Q6XCG6 107 aa3.64□□□□□ -1.83
HMBOX1-211ENST00000524238 LUZP6Q538Z0 58 aa3.63□□□□□ -1.83
HMBOX1-211ENST00000524238 R4GN34 69 aa3.62□□□□□ -1.83
HMBOX1-211ENST00000524238 LRP1Q07954 4544 aaKnown RBP3.57□□□□□ -1.84
HMBOX1-211ENST00000524238 FAT3Q8TDW7 4589 aa3.57□□□□□ -1.84
HMBOX1-211ENST00000524238 HYDINQ4G0P3 5121 aa3.57□□□□□ -1.84
HMBOX1-211ENST00000524238 TNXBP22105 4242 aa3.56□□□□□ -1.84
HMBOX1-211ENST00000524238 Q5VSD8 79 aa3.55□□□□□ -1.84
HMBOX1-211ENST00000524238 DYNC1H1Q14204 4646 aaKnown RBP3.54□□□□□ -1.84
HMBOX1-211ENST00000524238 FAT1Q14517 4588 aa3.53□□□□□ -1.84
HMBOX1-211ENST00000524238 HSPG2P98160 4391 aa3.5□□□□□ -1.85
HMBOX1-211ENST00000524238 KRTAP23-1A1A580 65 aa3.48□□□□□ -1.85
HMBOX1-211ENST00000524238 KRTAP21-3Q3LHN1 58 aa3.48□□□□□ -1.85
HMBOX1-211ENST00000524238 CAMK2N1Q7Z7J9 78 aa3.47□□□□□ -1.85
HMBOX1-211ENST00000524238 SEC61BP60468 96 aaKnown RBP3.46□□□□□ -1.86
HMBOX1-211ENST00000524238 MT1HL1P0DM35 61 aa3.45□□□□□ -1.86
HMBOX1-211ENST00000524238 TNP1P09430 55 aa3.4□□□□□ -1.87
HMBOX1-211ENST00000524238 SPRR5A0A1B0GTR4 108 aa3.39□□□□□ -1.87
HMBOX1-211ENST00000524238 DNHD1Q96M86 4753 aa3.38□□□□□ -1.87
HMBOX1-211ENST00000524238 MYCBP2O75592 4640 aa3.38□□□□□ -1.87
HMBOX1-211ENST00000524238 LCE5AQ5TCM9 118 aa3.36□□□□□ -1.87
HMBOX1-211ENST00000524238 LCE4AQ5TA78 99 aa3.33□□□□□ -1.88
HMBOX1-211ENST00000524238 PRO2289Q9P1D8 64 aa3.27□□□□□ -1.89
HMBOX1-211ENST00000524238 LPAP08519 4548 aa3.27□□□□□ -1.89
HMBOX1-211ENST00000524238 RYR2Q92736 4967 aa3.25□□□□□ -1.89
HMBOX1-211ENST00000524238 INE1O15225 51 aa3.25□□□□□ -1.89
HMBOX1-211ENST00000524238 LRP2P98164 4655 aa3.25□□□□□ -1.89
HMBOX1-211ENST00000524238 KMT2CQ8NEZ4 4911 aaKnown RBP3.24□□□□□ -1.89
HMBOX1-211ENST00000524238 KRTAP19-2Q3LHN2 52 aa3.22□□□□□ -1.89
HMBOX1-211ENST00000524238 RYR1P21817 5038 aa3.21□□□□□ -1.9
HMBOX1-211ENST00000524238 KRTAP4-1Q9BYQ7 146 aa3.21□□□□□ -1.9
HMBOX1-211ENST00000524238 KRTAP9-7A8MTY7 169 aa3.19□□□□□ -1.9
HMBOX1-211ENST00000524238 MUC17Q685J3 4493 aa3.19□□□□□ -1.9
HMBOX1-211ENST00000524238 KRTAP19-4Q3LI73 84 aa3.17□□□□□ -1.9
HMBOX1-211ENST00000524238 SPRR2GQ9BYE4 73 aa3.13□□□□□ -1.91
HMBOX1-211ENST00000524238 KRTAP9-3Q9BYQ3 159 aa3.13□□□□□ -1.91
HMBOX1-211ENST00000524238 LCE3AQ5TA76 89 aa3.09□□□□□ -1.91
HMBOX1-211ENST00000524238 KRTAP8-1Q8IUC2 63 aa3.08□□□□□ -1.92
HMBOX1-211ENST00000524238 FLGP20930 4061 aaPredicted RBP3.07□□□□□ -1.92
HMBOX1-211ENST00000524238 RYR3Q15413 4870 aa3.06□□□□□ -1.92
HMBOX1-211ENST00000524238 HERC1Q15751 4861 aa3.05□□□□□ -1.92
HMBOX1-211ENST00000524238 KIAA1109Q2LD37 5005 aa3.03□□□□□ -1.93
HMBOX1-211ENST00000524238 ABCA13Q86UQ4 5058 aa2.97□□□□□ -1.93
HMBOX1-211ENST00000524238 KRTAP12-3P60328 96 aa2.97□□□□□ -1.93
HMBOX1-211ENST00000524238 M0R2T5 61 aa2.96□□□□□ -1.94
HMBOX1-211ENST00000524238 KRTAP19-8Q3LI54 63 aa2.96□□□□□ -1.94
HMBOX1-211ENST00000524238 KRTAP10-12P60413 245 aa2.94□□□□□ -1.94
HMBOX1-211ENST00000524238 KRTAP10-10P60014 251 aa2.92□□□□□ -1.94
HMBOX1-211ENST00000524238 MT2AP02795 61 aa2.88□□□□□ -1.95
HMBOX1-211ENST00000524238 KRTAP10-5P60370 271 aa2.88□□□□□ -1.95
HMBOX1-211ENST00000524238 BIRC6Q9NR09 4857 aa2.87□□□□□ -1.95
HMBOX1-211ENST00000524238 MT1FP04733 61 aa2.87□□□□□ -1.95
HMBOX1-211ENST00000524238 MT1HP80294 61 aa2.87□□□□□ -1.95
HMBOX1-211ENST00000524238 MT1XP80297 61 aa2.87□□□□□ -1.95
HMBOX1-211ENST00000524238 MT1BP07438 61 aa2.84□□□□□ -1.96
HMBOX1-211ENST00000524238 EPPK1P58107 5090 aaKnown RBP2.82□□□□□ -1.96
HMBOX1-211ENST00000524238 LCE3CQ5T5A8 94 aa2.82□□□□□ -1.96
HMBOX1-211ENST00000524238 PCLOQ9Y6V0 5065 aa2.78□□□□□ -1.96
HMBOX1-211ENST00000524238 KRTAP10-7P60409 375 aaPredicted RBP2.78□□□□□ -1.96
HMBOX1-211ENST00000524238 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms