RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 Q8IZM0 81 aa1.85□□□□□ -2.11
CPNE3-206ENST00000523469 UQCR10Q9UDW1 63 aa1.85□□□□□ -2.11
CPNE3-206ENST00000523469 ETDCA0A1B0GVM5 59 aa1.84□□□□□ -2.11
CPNE3-206ENST00000523469 DMAC1Q96GE9 116 aa1.84□□□□□ -2.11
CPNE3-206ENST00000523469 SMCO4Q9NRQ5 59 aa1.84□□□□□ -2.11
CPNE3-206ENST00000523469 APOC3P02656 99 aa1.83□□□□□ -2.12
CPNE3-206ENST00000523469 RPL39P62891 51 aaKnown RBP1.83□□□□□ -2.12
CPNE3-206ENST00000523469 SPTSSBQ8NFR3 76 aa1.83□□□□□ -2.12
CPNE3-206ENST00000523469 PMCHL2Q9BQD1 86 aa1.83□□□□□ -2.12
CPNE3-206ENST00000523469 TRBV7-7A0A0K0K1E9 115 aa1.82□□□□□ -2.12
CPNE3-206ENST00000523469 TRBV10-3A0A0K0K1G6 114 aa1.82□□□□□ -2.12
CPNE3-206ENST00000523469 NAP1L6A6NFF2 107 aa1.82□□□□□ -2.12
CPNE3-206ENST00000523469 JMJD7-PLA2G4BH0Y9G9 81 aa1.82□□□□□ -2.12
CPNE3-206ENST00000523469 ATOX1O00244 68 aa1.82□□□□□ -2.12
CPNE3-206ENST00000523469 POLR2KP53803 58 aaKnown RBP1.82□□□□□ -2.12
CPNE3-206ENST00000523469 KRTDAPP60985 99 aa1.82□□□□□ -2.12
CPNE3-206ENST00000523469 KRTAP5-10Q6L8G5 202 aa1.82□□□□□ -2.12
CPNE3-206ENST00000523469 ALKAL2Q6UX46 152 aa1.82□□□□□ -2.12
CPNE3-206ENST00000523469 IFI27L1Q96BM0 104 aa1.82□□□□□ -2.12
CPNE3-206ENST00000523469 CTXND1A0A1B0GTU2 59 aa1.81□□□□□ -2.12
CPNE3-206ENST00000523469 HCG22E2RYF7 251 aa1.81□□□□□ -2.12
CPNE3-206ENST00000523469 CCKP06307 115 aa1.81□□□□□ -2.12
CPNE3-206ENST00000523469 PDE6GP18545 87 aa1.81□□□□□ -2.12
CPNE3-206ENST00000523469 IFI27P40305 119 aaPredicted RBP1.81□□□□□ -2.12
CPNE3-206ENST00000523469 ADIRFQ15847 76 aa1.81□□□□□ -2.12
CPNE3-206ENST00000523469 Q5VV11 94 aa1.81□□□□□ -2.12
CPNE3-206ENST00000523469 S100ZQ8WXG8 99 aa1.81□□□□□ -2.12
CPNE3-206ENST00000523469 OBSCN-AS1Q96MR7 158 aa1.81□□□□□ -2.12
CPNE3-206ENST00000523469 A0A087WXM4 84 aa1.8□□□□□ -2.12
CPNE3-206ENST00000523469 TRAV13-2A0A0B4J235 113 aa1.8□□□□□ -2.12
CPNE3-206ENST00000523469 INE1O15225 51 aa1.8□□□□□ -2.12
CPNE3-206ENST00000523469 SIX6O95475 246 aa1.8□□□□□ -2.12
CPNE3-206ENST00000523469 SEC11AP67812 179 aa1.8□□□□□ -2.12
CPNE3-206ENST00000523469 SERF2P84101 59 aa1.8□□□□□ -2.12
CPNE3-206ENST00000523469 Q5BKY6 102 aa1.8□□□□□ -2.12
CPNE3-206ENST00000523469 KRTAP8-1Q8IUC2 63 aa1.8□□□□□ -2.12
CPNE3-206ENST00000523469 hADV29S1A0JD25 119 aa1.79□□□□□ -2.12
CPNE3-206ENST00000523469 COX7B2Q8TF08 81 aa1.79□□□□□ -2.12
CPNE3-206ENST00000523469 ZNF625Q96I27 306 aaPredicted RBP1.79□□□□□ -2.12
CPNE3-206ENST00000523469 C20orf78Q9BR46 151 aa1.79□□□□□ -2.12
CPNE3-206ENST00000523469 CNFNQ9BYD5 112 aa1.79□□□□□ -2.12
CPNE3-206ENST00000523469 PPP1R17O96001 155 aa1.78□□□□□ -2.12
CPNE3-206ENST00000523469 DNAL4O96015 105 aa1.78□□□□□ -2.12
CPNE3-206ENST00000523469 SERP2Q8N6R1 65 aa1.78□□□□□ -2.12
CPNE3-206ENST00000523469 Q96NJ1 140 aa1.78□□□□□ -2.12
CPNE3-206ENST00000523469 CYP4F30PQ9H0H9 118 aa1.78□□□□□ -2.12
CPNE3-206ENST00000523469 SPCS1Q9Y6A9 102 aa1.78□□□□□ -2.12
CPNE3-206ENST00000523469 TRAV23DV6A0A075B6W5 121 aa1.77□□□□□ -2.13
CPNE3-206ENST00000523469 LOC110117498A0A087WWA1 95 aa1.77□□□□□ -2.13
CPNE3-206ENST00000523469 HIGD1CA8MV81 97 aa1.77□□□□□ -2.13
CPNE3-206ENST00000523469 NCR3O14931 201 aa1.77□□□□□ -2.13
CPNE3-206ENST00000523469 NDUFC1O43677 76 aa1.77□□□□□ -2.13
CPNE3-206ENST00000523469 MT1BP07438 61 aa1.77□□□□□ -2.13
CPNE3-206ENST00000523469 SPRR1AP35321 89 aa1.77□□□□□ -2.13
CPNE3-206ENST00000523469 FAM213BQ8TBF2 198 aa1.77□□□□□ -2.13
CPNE3-206ENST00000523469 PPP1R1CQ8WVI7 109 aa1.77□□□□□ -2.13
CPNE3-206ENST00000523469 CDKN2A-AS1Q9UH64 79 aa1.77□□□□□ -2.13
CPNE3-206ENST00000523469 V9GYH0 126 aa1.77□□□□□ -2.13
CPNE3-206ENST00000523469 A0A1W2PPM0 123 aa1.76□□□□□ -2.13
CPNE3-206ENST00000523469 IGLC3P0DOY3 106 aa1.76□□□□□ -2.13
CPNE3-206ENST00000523469 SNURFQ9Y675 71 aa1.76□□□□□ -2.13
CPNE3-206ENST00000523469 SYS1-DBNDD2H3BUS1 97 aa1.75□□□□□ -2.13
CPNE3-206ENST00000523469 SPATA45Q537H7 98 aa1.75□□□□□ -2.13
CPNE3-206ENST00000523469 Q6ZRX8 168 aa1.75□□□□□ -2.13
CPNE3-206ENST00000523469 SMIM2Q9BVW6 85 aa1.75□□□□□ -2.13
CPNE3-206ENST00000523469 KCNQ1DNQ9H478 68 aa1.75□□□□□ -2.13
CPNE3-206ENST00000523469 TEX49A0A1B0GTD5 131 aa1.74□□□□□ -2.13
CPNE3-206ENST00000523469 KANTRA0A1W2PQU2 76 aa1.74□□□□□ -2.13
CPNE3-206ENST00000523469 MT4P47944 62 aa1.74□□□□□ -2.13
CPNE3-206ENST00000523469 ETDBQ3ZM63 59 aa1.74□□□□□ -2.13
CPNE3-206ENST00000523469 BVES-AS1Q5T3Y7 98 aa1.74□□□□□ -2.13
CPNE3-206ENST00000523469 LOC101927531A0A1B0GV80 90 aa1.73□□□□□ -2.13
CPNE3-206ENST00000523469 NXT2Q9NPJ8 142 aaKnown RBP1.73□□□□□ -2.13
CPNE3-206ENST00000523469 A0A1B0GUT8 65 aa1.72□□□□□ -2.13
CPNE3-206ENST00000523469 COX17Q14061 63 aa1.72□□□□□ -2.13
CPNE3-206ENST00000523469 C20orf197Q8N268 126 aa1.72□□□□□ -2.13
CPNE3-206ENST00000523469 AMELXQ99217 191 aa1.72□□□□□ -2.13
CPNE3-206ENST00000523469 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.13
CPNE3-206ENST00000523469 ACYP1P07311 99 aa1.71□□□□□ -2.14
CPNE3-206ENST00000523469 LINC00158P58513 81 aa1.71□□□□□ -2.14
CPNE3-206ENST00000523469 PMCHL1Q16048 86 aa1.71□□□□□ -2.14
CPNE3-206ENST00000523469 C18orf32Q8TCD1 76 aa1.71□□□□□ -2.14
CPNE3-206ENST00000523469 IGKV3D-7A0A0C4DH55 119 aa1.7□□□□□ -2.14
CPNE3-206ENST00000523469 H3BUT2 72 aa1.7□□□□□ -2.14
CPNE3-206ENST00000523469 H7BZZ5 65 aa1.7□□□□□ -2.14
CPNE3-206ENST00000523469 SPRR1BP22528 89 aa1.7□□□□□ -2.14
CPNE3-206ENST00000523469 KLKP1Q107X0 134 aa1.7□□□□□ -2.14
CPNE3-206ENST00000523469 KRTAP19-8Q3LI54 63 aa1.7□□□□□ -2.14
CPNE3-206ENST00000523469 MANBALQ9NQG1 85 aa1.7□□□□□ -2.14
CPNE3-206ENST00000523469 GNG13Q9P2W3 67 aa1.7□□□□□ -2.14
CPNE3-206ENST00000523469 PRO1854Q9UHT4 67 aa1.7□□□□□ -2.14
CPNE3-206ENST00000523469 D6R8Y8 96 aa1.69□□□□□ -2.14
CPNE3-206ENST00000523469 COX6CP09669 75 aa1.69□□□□□ -2.14
CPNE3-206ENST00000523469 DEFB105AQ8NG35 78 aa1.69□□□□□ -2.14
CPNE3-206ENST00000523469 CYSTM1Q9H1C7 97 aa1.69□□□□□ -2.14
CPNE3-206ENST00000523469 HIGD1BQ9P298 99 aa1.69□□□□□ -2.14
CPNE3-206ENST00000523469 TMEM170BQ5T4T1 132 aa1.68□□□□□ -2.14
CPNE3-206ENST00000523469 LINC00643Q86TS7 51 aa1.68□□□□□ -2.14
CPNE3-206ENST00000523469 TRAV22A0A0B4J277 110 aa1.67□□□□□ -2.14
CPNE3-206ENST00000523469 ELOF1P60002 83 aaKnown RBP1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 192.9 ms