RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 HUWE1Q7Z6Z7 4374 aaKnown RBP1.79□□□□□ -2.12
CTNNA1-238ENST00000523298 CRIPTQ9P021 101 aa1.78□□□□□ -2.12
CTNNA1-238ENST00000523298 COL7A1Q02388 2944 aa1.78□□□□□ -2.12
CTNNA1-238ENST00000523298 FBN3Q75N90 2809 aa1.78□□□□□ -2.12
CTNNA1-238ENST00000523298 STARD9Q9P2P6 4700 aa1.77□□□□□ -2.13
CTNNA1-238ENST00000523298 HTN3P15516 51 aa1.77□□□□□ -2.13
CTNNA1-238ENST00000523298 RPL37P61927 97 aaKnown RBP1.77□□□□□ -2.13
CTNNA1-238ENST00000523298 STAB2Q8WWQ8 2551 aa1.76□□□□□ -2.13
CTNNA1-238ENST00000523298 PLECQ15149 4684 aaKnown RBP1.76□□□□□ -2.13
CTNNA1-238ENST00000523298 MEGF8Q7Z7M0 2845 aa1.76□□□□□ -2.13
CTNNA1-238ENST00000523298 DEFB130BP0DP73 79 aa1.75□□□□□ -2.13
CTNNA1-238ENST00000523298 DEFB130AP0DP74 79 aa1.75□□□□□ -2.13
CTNNA1-238ENST00000523298 NOP10Q9NPE3 64 aaKnown RBP1.75□□□□□ -2.13
CTNNA1-238ENST00000523298 DNAH7Q8WXX0 4024 aa1.75□□□□□ -2.13
CTNNA1-238ENST00000523298 CSMD3Q7Z407 3707 aa1.74□□□□□ -2.13
CTNNA1-238ENST00000523298 TENM2Q9NT68 2774 aa1.74□□□□□ -2.13
CTNNA1-238ENST00000523298 UNQ6190/PRO20217Q6UXQ8 127 aa1.74□□□□□ -2.13
CTNNA1-238ENST00000523298 LINC00575Q6W349 94 aa1.74□□□□□ -2.13
CTNNA1-238ENST00000523298 A0A096LPF7 62 aa1.73□□□□□ -2.13
CTNNA1-238ENST00000523298 A8MTW9 85 aa1.73□□□□□ -2.13
CTNNA1-238ENST00000523298 SPART-AS1P0CW21 52 aa1.73□□□□□ -2.13
CTNNA1-238ENST00000523298 UBE2DNLQ8IWF7 75 aa1.73□□□□□ -2.13
CTNNA1-238ENST00000523298 KRTAP13-4Q3LI77 160 aa1.72□□□□□ -2.13
CTNNA1-238ENST00000523298 PCOTHQ58A44 107 aa1.72□□□□□ -2.13
CTNNA1-238ENST00000523298 DEFB104AQ8WTQ1 72 aa1.72□□□□□ -2.13
CTNNA1-238ENST00000523298 LYSTQ99698 3801 aa1.72□□□□□ -2.13
CTNNA1-238ENST00000523298 MRPL34Q9BQ48 92 aaKnown RBP1.72□□□□□ -2.13
CTNNA1-238ENST00000523298 H0YAA0 97 aa1.71□□□□□ -2.14
CTNNA1-238ENST00000523298 K7EQZ3 153 aa1.71□□□□□ -2.14
CTNNA1-238ENST00000523298 APLNQ9ULZ1 77 aa1.7□□□□□ -2.14
CTNNA1-238ENST00000523298 DYNC2H1Q8NCM8 4307 aaKnown RBP1.7□□□□□ -2.14
CTNNA1-238ENST00000523298 HYDINQ4G0P3 5121 aa1.69□□□□□ -2.14
CTNNA1-238ENST00000523298 SACSQ9NZJ4 4579 aa1.69□□□□□ -2.14
CTNNA1-238ENST00000523298 COX6B2Q6YFQ2 88 aa1.69□□□□□ -2.14
CTNNA1-238ENST00000523298 RPL39LQ96EH5 51 aaKnown RBP1.69□□□□□ -2.14
CTNNA1-238ENST00000523298 PRO0255Q9UI72 69 aa1.69□□□□□ -2.14
CTNNA1-238ENST00000523298 KMT2AQ03164 3969 aa1.69□□□□□ -2.14
CTNNA1-238ENST00000523298 KMT2CQ8NEZ4 4911 aaKnown RBP1.68□□□□□ -2.14
CTNNA1-238ENST00000523298 WFDC10BQ8IUB3 73 aa1.68□□□□□ -2.14
CTNNA1-238ENST00000523298 C10orf95Q9H7T3 257 aa1.68□□□□□ -2.14
CTNNA1-238ENST00000523298 RYR3Q15413 4870 aa1.68□□□□□ -2.14
CTNNA1-238ENST00000523298 RYR2Q92736 4967 aa1.68□□□□□ -2.14
CTNNA1-238ENST00000523298 DNAH10Q8IVF4 4471 aa1.67□□□□□ -2.14
CTNNA1-238ENST00000523298 CLPSL2Q6UWE3 100 aa1.67□□□□□ -2.14
CTNNA1-238ENST00000523298 TP53AIP1Q9HCN2 124 aa1.67□□□□□ -2.14
CTNNA1-238ENST00000523298 VPS13DQ5THJ4 4388 aa1.67□□□□□ -2.14
CTNNA1-238ENST00000523298 DNAH6Q9C0G6 4158 aa1.66□□□□□ -2.14
CTNNA1-238ENST00000523298 M0QY20 66 aa1.66□□□□□ -2.14
CTNNA1-238ENST00000523298 POLR2KP53803 58 aaKnown RBP1.66□□□□□ -2.14
CTNNA1-238ENST00000523298 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
CTNNA1-238ENST00000523298 C6orf48Q9UBA6 75 aa1.66□□□□□ -2.14
CTNNA1-238ENST00000523298 DNAH17Q9UFH2 4485 aa1.66□□□□□ -2.14
CTNNA1-238ENST00000523298 FRAS1Q86XX4 4008 aa1.65□□□□□ -2.14
CTNNA1-238ENST00000523298 DNAH1Q9P2D7 4330 aa1.65□□□□□ -2.15
CTNNA1-238ENST00000523298 H3BNG1 76 aa1.65□□□□□ -2.15
CTNNA1-238ENST00000523298 LELP1Q5T871 98 aa1.65□□□□□ -2.15
CTNNA1-238ENST00000523298 DNAH5Q8TE73 4624 aa1.64□□□□□ -2.15
CTNNA1-238ENST00000523298 RPL39P62891 51 aaKnown RBP1.64□□□□□ -2.15
CTNNA1-238ENST00000523298 DNAH2Q9P225 4427 aa1.64□□□□□ -2.15
CTNNA1-238ENST00000523298 COX6A2Q02221 97 aa1.63□□□□□ -2.15
CTNNA1-238ENST00000523298 LINC01556Q5JQF7 62 aa1.63□□□□□ -2.15
CTNNA1-238ENST00000523298 Q6ZSA8 131 aa1.63□□□□□ -2.15
CTNNA1-238ENST00000523298 WFDC13Q8IUB5 93 aa1.63□□□□□ -2.15
CTNNA1-238ENST00000523298 HECTD4Q9Y4D8 3996 aa1.63□□□□□ -2.15
CTNNA1-238ENST00000523298 DYNC1H1Q14204 4646 aaKnown RBP1.62□□□□□ -2.15
CTNNA1-238ENST00000523298 HMCN1Q96RW7 5635 aa1.62□□□□□ -2.15
CTNNA1-238ENST00000523298 DNAH11Q96DT5 4516 aa1.62□□□□□ -2.15
CTNNA1-238ENST00000523298 EPPK1P58107 5090 aaKnown RBP1.62□□□□□ -2.15
CTNNA1-238ENST00000523298 IGLV5-48A0A075B6I7 105 aa1.61□□□□□ -2.15
CTNNA1-238ENST00000523298 BIRC6Q9NR09 4857 aa1.61□□□□□ -2.15
CTNNA1-238ENST00000523298 FLG2Q5D862 2391 aaPredicted RBP1.61□□□□□ -2.15
CTNNA1-238ENST00000523298 PKD1P98161 4303 aa1.6□□□□□ -2.15
CTNNA1-238ENST00000523298 TOMM7Q9P0U1 55 aa1.6□□□□□ -2.15
CTNNA1-238ENST00000523298 FAT2Q9NYQ8 4349 aa1.59□□□□□ -2.15
CTNNA1-238ENST00000523298 LRP1BQ9NZR2 4599 aa1.59□□□□□ -2.15
CTNNA1-238ENST00000523298 H1FX-AS1Q4G0G2 97 aa1.59□□□□□ -2.15
CTNNA1-238ENST00000523298 DNAH8Q96JB1 4490 aa1.59□□□□□ -2.15
CTNNA1-238ENST00000523298 SMR3BP02814 79 aaPredicted RBP1.58□□□□□ -2.16
CTNNA1-238ENST00000523298 RYR1P21817 5038 aa1.57□□□□□ -2.16
CTNNA1-238ENST00000523298 APOBP04114 4563 aaKnown RBP1.57□□□□□ -2.16
CTNNA1-238ENST00000523298 PKHD1P08F94 4074 aa1.56□□□□□ -2.16
CTNNA1-238ENST00000523298 A0A096LNI7 61 aa1.56□□□□□ -2.16
CTNNA1-238ENST00000523298 KIAA1109Q2LD37 5005 aa1.56□□□□□ -2.16
CTNNA1-238ENST00000523298 MMP24-AS1A0A0U1RRL7 71 aa1.55□□□□□ -2.16
CTNNA1-238ENST00000523298 SPRR1AP35321 89 aa1.55□□□□□ -2.16
CTNNA1-238ENST00000523298 FAT1Q14517 4588 aa1.54□□□□□ -2.16
CTNNA1-238ENST00000523298 Q5VSD8 79 aa1.54□□□□□ -2.16
CTNNA1-238ENST00000523298 HERC2O95714 4834 aa1.54□□□□□ -2.16
CTNNA1-238ENST00000523298 HSPG2P98160 4391 aa1.52□□□□□ -2.17
CTNNA1-238ENST00000523298 ABCA13Q86UQ4 5058 aa1.51□□□□□ -2.17
CTNNA1-238ENST00000523298 DEFB105AQ8NG35 78 aa1.51□□□□□ -2.17
CTNNA1-238ENST00000523298 MYCBP2O75592 4640 aa1.51□□□□□ -2.17
CTNNA1-238ENST00000523298 VPS13BQ7Z7G8 4022 aa1.51□□□□□ -2.17
CTNNA1-238ENST00000523298 PKHD1L1Q86WI1 4243 aa1.51□□□□□ -2.17
CTNNA1-238ENST00000523298 FAT3Q8TDW7 4589 aa1.5□□□□□ -2.17
CTNNA1-238ENST00000523298 LRP1Q07954 4544 aaKnown RBP1.5□□□□□ -2.17
CTNNA1-238ENST00000523298 PRLHP81277 87 aa1.5□□□□□ -2.17
CTNNA1-238ENST00000523298 DMBT1Q9UGM3 2413 aaPredicted RBP1.5□□□□□ -2.17
CTNNA1-238ENST00000523298 KRTAP10-4P60372 401 aaPredicted RBP1.49□□□□□ -2.17
CTNNA1-238ENST00000523298 SRRM2Q9UQ35 2752 aaKnown RBP1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms