RNA–Protein interactions for RNA: ENST00000522771.6

MEG3-220, Transcript of maternally expressed 3, humanhuman

TSL 5 BASIC

Gene MEG3, Length 6,984 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-220ENST00000522771 ALMS1Q8TCU4 4167 aa4.64□□□□□ -1.67
MEG3-220ENST00000522771 LORP23490 312 aaPredicted RBP4.64□□□□□ -1.67
MEG3-220ENST00000522771 KRTAP10-4P60372 401 aaPredicted RBP4.62□□□□□ -1.67
MEG3-220ENST00000522771 DNAH9Q9NYC9 4486 aa4.61□□□□□ -1.67
MEG3-220ENST00000522771 KRTAP10-7P60409 375 aaPredicted RBP4.55□□□□□ -1.68
MEG3-220ENST00000522771 KRTAP4-5Q9BYR2 181 aa4.55□□□□□ -1.68
MEG3-220ENST00000522771 KRTAP10-5P60370 271 aa4.53□□□□□ -1.68
MEG3-220ENST00000522771 CMYA5Q8N3K9 4069 aa4.48□□□□□ -1.69
MEG3-220ENST00000522771 DNAH1Q9P2D7 4330 aa4.47□□□□□ -1.69
MEG3-220ENST00000522771 DNAH10Q8IVF4 4471 aa4.42□□□□□ -1.7
MEG3-220ENST00000522771 DNAH3Q8TD57 4116 aa4.41□□□□□ -1.7
MEG3-220ENST00000522771 KMT2AQ03164 3969 aa4.4□□□□□ -1.7
MEG3-220ENST00000522771 DNAH2Q9P225 4427 aa4.4□□□□□ -1.71
MEG3-220ENST00000522771 PLECQ15149 4684 aaKnown RBP4.37□□□□□ -1.71
MEG3-220ENST00000522771 ANK2Q01484 3957 aa4.37□□□□□ -1.71
MEG3-220ENST00000522771 PRKDCP78527 4128 aaKnown RBP4.36□□□□□ -1.71
MEG3-220ENST00000522771 KRTAP8-1Q8IUC2 63 aa4.33□□□□□ -1.72
MEG3-220ENST00000522771 LYSTQ99698 3801 aa4.3□□□□□ -1.72
MEG3-220ENST00000522771 VPS13DQ5THJ4 4388 aa4.3□□□□□ -1.72
MEG3-220ENST00000522771 FRAS1Q86XX4 4008 aa4.3□□□□□ -1.72
MEG3-220ENST00000522771 DNAH8Q96JB1 4490 aa4.29□□□□□ -1.72
MEG3-220ENST00000522771 KRTAP4-1Q9BYQ7 146 aa4.28□□□□□ -1.72
MEG3-220ENST00000522771 STARD9Q9P2P6 4700 aa4.28□□□□□ -1.72
MEG3-220ENST00000522771 FAT2Q9NYQ8 4349 aa4.24□□□□□ -1.73
MEG3-220ENST00000522771 DNAH11Q96DT5 4516 aa4.24□□□□□ -1.73
MEG3-220ENST00000522771 DNAH17Q9UFH2 4485 aa4.23□□□□□ -1.73
MEG3-220ENST00000522771 DNAH5Q8TE73 4624 aa4.22□□□□□ -1.73
MEG3-220ENST00000522771 VPS13BQ7Z7G8 4022 aa4.22□□□□□ -1.73
MEG3-220ENST00000522771 MT1HP80294 61 aa4.19□□□□□ -1.74
MEG3-220ENST00000522771 DYNC2H1Q8NCM8 4307 aaKnown RBP4.19□□□□□ -1.74
MEG3-220ENST00000522771 DNAH7Q8WXX0 4024 aa4.19□□□□□ -1.74
MEG3-220ENST00000522771 SPRR2GQ9BYE4 73 aa4.18□□□□□ -1.74
MEG3-220ENST00000522771 KRTAP19-5Q3LI72 72 aa4.16□□□□□ -1.74
MEG3-220ENST00000522771 LRP1BQ9NZR2 4599 aa4.16□□□□□ -1.74
MEG3-220ENST00000522771 DNAH6Q9C0G6 4158 aa4.15□□□□□ -1.75
MEG3-220ENST00000522771 MT2AP02795 61 aa4.14□□□□□ -1.75
MEG3-220ENST00000522771 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
MEG3-220ENST00000522771 HECTD4Q9Y4D8 3996 aa4.12□□□□□ -1.75
MEG3-220ENST00000522771 DNHD1Q96M86 4753 aa4.12□□□□□ -1.75
MEG3-220ENST00000522771 MT1FP04733 61 aa4.07□□□□□ -1.76
MEG3-220ENST00000522771 FAT1Q14517 4588 aa4.04□□□□□ -1.76
MEG3-220ENST00000522771 SACSQ9NZJ4 4579 aa4.02□□□□□ -1.77
MEG3-220ENST00000522771 DYNC1H1Q14204 4646 aaKnown RBP4.02□□□□□ -1.77
MEG3-220ENST00000522771 SPRR2FQ96RM1 72 aa3.98□□□□□ -1.77
MEG3-220ENST00000522771 LCE2DQ5TA82 110 aaPredicted RBP3.95□□□□□ -1.78
MEG3-220ENST00000522771 PKHD1P08F94 4074 aa3.91□□□□□ -1.78
MEG3-220ENST00000522771 APOBP04114 4563 aaKnown RBP3.91□□□□□ -1.78
MEG3-220ENST00000522771 KRTAP17-1Q9BYP8 105 aa3.9□□□□□ -1.78
MEG3-220ENST00000522771 LCE3BQ5TA77 95 aa3.87□□□□□ -1.79
MEG3-220ENST00000522771 HSPG2P98160 4391 aa3.86□□□□□ -1.79
MEG3-220ENST00000522771 KRTAP19-4Q3LI73 84 aa3.85□□□□□ -1.79
MEG3-220ENST00000522771 KRTAP19-1Q8IUB9 90 aa3.84□□□□□ -1.8
MEG3-220ENST00000522771 KRTAP12-4P60329 112 aa3.82□□□□□ -1.8
MEG3-220ENST00000522771 KRTAP19-8Q3LI54 63 aa3.81□□□□□ -1.8
MEG3-220ENST00000522771 MT1XP80297 61 aa3.81□□□□□ -1.8
MEG3-220ENST00000522771 RYR1P21817 5038 aa3.81□□□□□ -1.8
MEG3-220ENST00000522771 LRP1Q07954 4544 aaKnown RBP3.79□□□□□ -1.8
MEG3-220ENST00000522771 MT1GP13640 62 aa3.79□□□□□ -1.8
MEG3-220ENST00000522771 SPRR5A0A1B0GTR4 108 aa3.78□□□□□ -1.8
MEG3-220ENST00000522771 PKD1P98161 4303 aa3.76□□□□□ -1.81
MEG3-220ENST00000522771 FAT3Q8TDW7 4589 aa3.76□□□□□ -1.81
MEG3-220ENST00000522771 HYDINQ4G0P3 5121 aa3.75□□□□□ -1.81
MEG3-220ENST00000522771 MYCBP2O75592 4640 aa3.73□□□□□ -1.81
MEG3-220ENST00000522771 SPRR2EP22531 72 aa3.72□□□□□ -1.81
MEG3-220ENST00000522771 SPRR2BP35325 72 aa3.72□□□□□ -1.81
MEG3-220ENST00000522771 SPRR2AP35326 72 aa3.72□□□□□ -1.81
MEG3-220ENST00000522771 LPAP08519 4548 aa3.72□□□□□ -1.81
MEG3-220ENST00000522771 MT1BP07438 61 aa3.7□□□□□ -1.82
MEG3-220ENST00000522771 TNXBP22105 4242 aa3.7□□□□□ -1.82
MEG3-220ENST00000522771 RYR3Q15413 4870 aa3.69□□□□□ -1.82
MEG3-220ENST00000522771 KRTAP4-8A0A0G2JLE6 195 aa3.69□□□□□ -1.82
MEG3-220ENST00000522771 KRTAP4-8Q9BYQ9 185 aa3.69□□□□□ -1.82
MEG3-220ENST00000522771 PKHD1L1Q86WI1 4243 aa3.65□□□□□ -1.82
MEG3-220ENST00000522771 KRTAP9-8Q9BYQ0 159 aa3.64□□□□□ -1.83
MEG3-220ENST00000522771 LCE3DQ9BYE3 92 aa3.63□□□□□ -1.83
MEG3-220ENST00000522771 KIAA1109Q2LD37 5005 aa3.6□□□□□ -1.83
MEG3-220ENST00000522771 LCE2BO14633 110 aa3.59□□□□□ -1.83
MEG3-220ENST00000522771 RYR2Q92736 4967 aa3.59□□□□□ -1.83
MEG3-220ENST00000522771 SPRR2DP22532 72 aa3.59□□□□□ -1.84
MEG3-220ENST00000522771 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
MEG3-220ENST00000522771 KRTAP4-7Q9BYR0 210 aa3.55□□□□□ -1.84
MEG3-220ENST00000522771 KRTAP9-3Q9BYQ3 159 aa3.54□□□□□ -1.84
MEG3-220ENST00000522771 LCE2CQ5TA81 110 aa3.52□□□□□ -1.85
MEG3-220ENST00000522771 LRP2P98164 4655 aa3.51□□□□□ -1.85
MEG3-220ENST00000522771 BIRC6Q9NR09 4857 aa3.5□□□□□ -1.85
MEG3-220ENST00000522771 MT1LQ93083 61 aa3.47□□□□□ -1.85
MEG3-220ENST00000522771 FLGP20930 4061 aaPredicted RBP3.46□□□□□ -1.86
MEG3-220ENST00000522771 KMT2CQ8NEZ4 4911 aaKnown RBP3.45□□□□□ -1.86
MEG3-220ENST00000522771 KRTAP19-3Q7Z4W3 81 aa3.45□□□□□ -1.86
MEG3-220ENST00000522771 HERC2O95714 4834 aa3.45□□□□□ -1.86
MEG3-220ENST00000522771 PRM1P04553 51 aa3.42□□□□□ -1.86
MEG3-220ENST00000522771 MT1EP04732 61 aa3.41□□□□□ -1.86
MEG3-220ENST00000522771 LOC100996750A0A140TA64 210 aa3.37□□□□□ -1.87
MEG3-220ENST00000522771 MUC17Q685J3 4493 aa3.34□□□□□ -1.87
MEG3-220ENST00000522771 KRTAP19-2Q3LHN2 52 aa3.31□□□□□ -1.88
MEG3-220ENST00000522771 MT1MQ8N339 61 aa3.31□□□□□ -1.88
MEG3-220ENST00000522771 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
MEG3-220ENST00000522771 MT3P25713 68 aa3.29□□□□□ -1.88
MEG3-220ENST00000522771 HERC1Q15751 4861 aa3.28□□□□□ -1.88
MEG3-220ENST00000522771 PCLOQ9Y6V0 5065 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 642.8 ms