RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 KRTAP12-3P60328 96 aa5.3□□□□□ -1.56
ERGIC1-208ENST00000520399 DNAH3Q8TD57 4116 aa5.29□□□□□ -1.56
ERGIC1-208ENST00000520399 KRTAP10-5P60370 271 aa5.28□□□□□ -1.56
ERGIC1-208ENST00000520399 DNAH1Q9P2D7 4330 aa5.26□□□□□ -1.57
ERGIC1-208ENST00000520399 FBN3Q75N90 2809 aa5.26□□□□□ -1.57
ERGIC1-208ENST00000520399 DNAH9Q9NYC9 4486 aa5.15□□□□□ -1.58
ERGIC1-208ENST00000520399 LCE3AQ5TA76 89 aa5.15□□□□□ -1.59
ERGIC1-208ENST00000520399 COL7A1Q02388 2944 aa5.13□□□□□ -1.59
ERGIC1-208ENST00000520399 MEGF8Q7Z7M0 2845 aa5.12□□□□□ -1.59
ERGIC1-208ENST00000520399 DYNC2H1Q8NCM8 4307 aaKnown RBP5.1□□□□□ -1.59
ERGIC1-208ENST00000520399 LORP23490 312 aaPredicted RBP5.1□□□□□ -1.59
ERGIC1-208ENST00000520399 KRTAP8-1Q8IUC2 63 aa5.09□□□□□ -1.59
ERGIC1-208ENST00000520399 DNHD1Q96M86 4753 aa5.08□□□□□ -1.6
ERGIC1-208ENST00000520399 CSMD3Q7Z407 3707 aa5.07□□□□□ -1.6
ERGIC1-208ENST00000520399 DNAH2Q9P225 4427 aa5.06□□□□□ -1.6
ERGIC1-208ENST00000520399 LYSTQ99698 3801 aa4.99□□□□□ -1.61
ERGIC1-208ENST00000520399 DNAH7Q8WXX0 4024 aa4.96□□□□□ -1.62
ERGIC1-208ENST00000520399 PLECQ15149 4684 aaKnown RBP4.95□□□□□ -1.62
ERGIC1-208ENST00000520399 DNAH17Q9UFH2 4485 aa4.95□□□□□ -1.62
ERGIC1-208ENST00000520399 PRKDCP78527 4128 aaKnown RBP4.94□□□□□ -1.62
ERGIC1-208ENST00000520399 DNAH10Q8IVF4 4471 aa4.94□□□□□ -1.62
ERGIC1-208ENST00000520399 DNAH5Q8TE73 4624 aa4.93□□□□□ -1.62
ERGIC1-208ENST00000520399 VPS13DQ5THJ4 4388 aa4.91□□□□□ -1.62
ERGIC1-208ENST00000520399 DNAH6Q9C0G6 4158 aa4.91□□□□□ -1.62
ERGIC1-208ENST00000520399 KRTAP4-1Q9BYQ7 146 aa4.9□□□□□ -1.62
ERGIC1-208ENST00000520399 DNAH11Q96DT5 4516 aa4.88□□□□□ -1.63
ERGIC1-208ENST00000520399 STARD9Q9P2P6 4700 aa4.88□□□□□ -1.63
ERGIC1-208ENST00000520399 MT1HP80294 61 aa4.87□□□□□ -1.63
ERGIC1-208ENST00000520399 FRAS1Q86XX4 4008 aa4.84□□□□□ -1.63
ERGIC1-208ENST00000520399 KRTAP10-7P60409 375 aaPredicted RBP4.82□□□□□ -1.64
ERGIC1-208ENST00000520399 HECTD4Q9Y4D8 3996 aa4.79□□□□□ -1.64
ERGIC1-208ENST00000520399 FAT2Q9NYQ8 4349 aa4.78□□□□□ -1.64
ERGIC1-208ENST00000520399 MT2AP02795 61 aa4.77□□□□□ -1.65
ERGIC1-208ENST00000520399 KMT2AQ03164 3969 aa4.76□□□□□ -1.65
ERGIC1-208ENST00000520399 SPRR2GQ9BYE4 73 aa4.76□□□□□ -1.65
ERGIC1-208ENST00000520399 DYNC1H1Q14204 4646 aaKnown RBP4.76□□□□□ -1.65
ERGIC1-208ENST00000520399 SACSQ9NZJ4 4579 aa4.75□□□□□ -1.65
ERGIC1-208ENST00000520399 DNAH8Q96JB1 4490 aa4.75□□□□□ -1.65
ERGIC1-208ENST00000520399 LRP1BQ9NZR2 4599 aa4.7□□□□□ -1.66
ERGIC1-208ENST00000520399 SPRR5A0A1B0GTR4 108 aa4.68□□□□□ -1.66
ERGIC1-208ENST00000520399 MT1FP04733 61 aa4.67□□□□□ -1.66
ERGIC1-208ENST00000520399 SPRR2FQ96RM1 72 aa4.63□□□□□ -1.67
ERGIC1-208ENST00000520399 FAT1Q14517 4588 aa4.62□□□□□ -1.67
ERGIC1-208ENST00000520399 PKD1P98161 4303 aa4.62□□□□□ -1.67
ERGIC1-208ENST00000520399 PKHD1L1Q86WI1 4243 aa4.61□□□□□ -1.67
ERGIC1-208ENST00000520399 KRTAP19-5Q3LI72 72 aa4.59□□□□□ -1.67
ERGIC1-208ENST00000520399 HYDINQ4G0P3 5121 aa4.54□□□□□ -1.68
ERGIC1-208ENST00000520399 LCE3CQ5T5A8 94 aa4.54□□□□□ -1.68
ERGIC1-208ENST00000520399 KRTAP19-4Q3LI73 84 aa4.53□□□□□ -1.68
ERGIC1-208ENST00000520399 RYR1P21817 5038 aa4.52□□□□□ -1.69
ERGIC1-208ENST00000520399 VPS13BQ7Z7G8 4022 aa4.5□□□□□ -1.69
ERGIC1-208ENST00000520399 PKHD1P08F94 4074 aa4.5□□□□□ -1.69
ERGIC1-208ENST00000520399 RYR3Q15413 4870 aa4.49□□□□□ -1.69
ERGIC1-208ENST00000520399 RYR2Q92736 4967 aa4.48□□□□□ -1.69
ERGIC1-208ENST00000520399 KIAA1109Q2LD37 5005 aa4.46□□□□□ -1.69
ERGIC1-208ENST00000520399 APOBP04114 4563 aaKnown RBP4.46□□□□□ -1.7
ERGIC1-208ENST00000520399 KRTAP17-1Q9BYP8 105 aa4.45□□□□□ -1.7
ERGIC1-208ENST00000520399 SPRR2EP22531 72 aa4.43□□□□□ -1.7
ERGIC1-208ENST00000520399 SPRR2BP35325 72 aa4.43□□□□□ -1.7
ERGIC1-208ENST00000520399 SPRR2AP35326 72 aa4.43□□□□□ -1.7
ERGIC1-208ENST00000520399 KRTAP19-8Q3LI54 63 aa4.41□□□□□ -1.7
ERGIC1-208ENST00000520399 KMT2CQ8NEZ4 4911 aaKnown RBP4.41□□□□□ -1.7
ERGIC1-208ENST00000520399 FAT3Q8TDW7 4589 aa4.39□□□□□ -1.71
ERGIC1-208ENST00000520399 LCE2DQ5TA82 110 aaPredicted RBP4.38□□□□□ -1.71
ERGIC1-208ENST00000520399 LCE3BQ5TA77 95 aa4.37□□□□□ -1.71
ERGIC1-208ENST00000520399 KRTAP19-1Q8IUB9 90 aa4.36□□□□□ -1.71
ERGIC1-208ENST00000520399 HERC1Q15751 4861 aa4.36□□□□□ -1.71
ERGIC1-208ENST00000520399 LRP1Q07954 4544 aaKnown RBP4.34□□□□□ -1.71
ERGIC1-208ENST00000520399 KRTAP12-4P60329 112 aa4.33□□□□□ -1.72
ERGIC1-208ENST00000520399 HSPG2P98160 4391 aa4.32□□□□□ -1.72
ERGIC1-208ENST00000520399 SPRR2DP22532 72 aa4.32□□□□□ -1.72
ERGIC1-208ENST00000520399 MT1XP80297 61 aa4.31□□□□□ -1.72
ERGIC1-208ENST00000520399 MYCBP2O75592 4640 aa4.28□□□□□ -1.72
ERGIC1-208ENST00000520399 TNXBP22105 4242 aa4.28□□□□□ -1.72
ERGIC1-208ENST00000520399 BIRC6Q9NR09 4857 aa4.27□□□□□ -1.73
ERGIC1-208ENST00000520399 MT1BP07438 61 aa4.25□□□□□ -1.73
ERGIC1-208ENST00000520399 HERC2O95714 4834 aa4.25□□□□□ -1.73
ERGIC1-208ENST00000520399 KRTAP9-8Q9BYQ0 159 aa4.24□□□□□ -1.73
ERGIC1-208ENST00000520399 EPPK1P58107 5090 aaKnown RBP4.24□□□□□ -1.73
ERGIC1-208ENST00000520399 LCE2BO14633 110 aa4.23□□□□□ -1.73
ERGIC1-208ENST00000520399 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
ERGIC1-208ENST00000520399 MT1GP13640 62 aa4.17□□□□□ -1.74
ERGIC1-208ENST00000520399 LCE2CQ5TA81 110 aa4.16□□□□□ -1.74
ERGIC1-208ENST00000520399 KRTAP9-3Q9BYQ3 159 aa4.15□□□□□ -1.74
ERGIC1-208ENST00000520399 LCE3EQ5T5B0 92 aa4.12□□□□□ -1.75
ERGIC1-208ENST00000520399 LPAP08519 4548 aa4.09□□□□□ -1.75
ERGIC1-208ENST00000520399 KRTAP4-8A0A0G2JLE6 195 aa4.09□□□□□ -1.75
ERGIC1-208ENST00000520399 KRTAP4-8Q9BYQ9 185 aa4.09□□□□□ -1.75
ERGIC1-208ENST00000520399 LRP2P98164 4655 aa4.07□□□□□ -1.76
ERGIC1-208ENST00000520399 MUC17Q685J3 4493 aa4.06□□□□□ -1.76
ERGIC1-208ENST00000520399 MT3P25713 68 aa4.06□□□□□ -1.76
ERGIC1-208ENST00000520399 ABCA13Q86UQ4 5058 aa4.05□□□□□ -1.76
ERGIC1-208ENST00000520399 KRTAP19-2Q3LHN2 52 aa3.95□□□□□ -1.78
ERGIC1-208ENST00000520399 PCLOQ9Y6V0 5065 aa3.95□□□□□ -1.78
ERGIC1-208ENST00000520399 KRTAP19-3Q7Z4W3 81 aa3.93□□□□□ -1.78
ERGIC1-208ENST00000520399 MT1LQ93083 61 aa3.91□□□□□ -1.78
ERGIC1-208ENST00000520399 MT1EP04732 61 aa3.88□□□□□ -1.79
ERGIC1-208ENST00000520399 PRM1P04553 51 aa3.86□□□□□ -1.79
ERGIC1-208ENST00000520399 KRTAP4-7Q9BYR0 210 aa3.86□□□□□ -1.79
ERGIC1-208ENST00000520399 FLGP20930 4061 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms