RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 LINC00167Q96N53 147 aa3.34□□□□□ -1.87
PABPC1-207ENST00000518716 FCGBPQ9Y6R7 5405 aaPredicted RBP3.34□□□□□ -1.88
PABPC1-207ENST00000518716 JMJD7-PLA2G4BH0Y9G9 81 aa3.33□□□□□ -1.88
PABPC1-207ENST00000518716 C1orf64Q8NEQ6 169 aa3.33□□□□□ -1.88
PABPC1-207ENST00000518716 ORMDL1Q9P0S3 153 aa3.33□□□□□ -1.88
PABPC1-207ENST00000518716 A0A1B0GVX0 72 aa3.32□□□□□ -1.88
PABPC1-207ENST00000518716 MIR22HGQ0VDD5 57 aa3.32□□□□□ -1.88
PABPC1-207ENST00000518716 SPAG11AQ6PDA7 123 aa3.32□□□□□ -1.88
PABPC1-207ENST00000518716 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.32□□□□□ -1.88
PABPC1-207ENST00000518716 SNURFQ9Y675 71 aa3.32□□□□□ -1.88
PABPC1-207ENST00000518716 A0A096LNJ9 63 aa3.31□□□□□ -1.88
PABPC1-207ENST00000518716 IGKV3D-7A0A0C4DH55 119 aa3.31□□□□□ -1.88
PABPC1-207ENST00000518716 LCE3AQ5TA76 89 aa3.31□□□□□ -1.88
PABPC1-207ENST00000518716 SPANXA2-OT1Q8N9U9 137 aa3.31□□□□□ -1.88
PABPC1-207ENST00000518716 LITAFQ99732 161 aa3.31□□□□□ -1.88
PABPC1-207ENST00000518716 MACF1Q9UPN3 7388 aaKnown RBP3.31□□□□□ -1.88
PABPC1-207ENST00000518716 A0A087WVE0 104 aa3.3□□□□□ -1.88
PABPC1-207ENST00000518716 H3BQ85 93 aa3.3□□□□□ -1.88
PABPC1-207ENST00000518716 PDE6GP18545 87 aa3.3□□□□□ -1.88
PABPC1-207ENST00000518716 NREPQ16612 68 aa3.3□□□□□ -1.88
PABPC1-207ENST00000518716 MIR7-3HGQ8N6C7 128 aa3.3□□□□□ -1.88
PABPC1-207ENST00000518716 ADM2Q7Z4H4 148 aa3.29□□□□□ -1.88
PABPC1-207ENST00000518716 Q8IZM0 81 aa3.29□□□□□ -1.88
PABPC1-207ENST00000518716 Q8NBF4 154 aa3.29□□□□□ -1.88
PABPC1-207ENST00000518716 DMAC1Q96GE9 116 aa3.29□□□□□ -1.88
PABPC1-207ENST00000518716 PRR15LQ9BU68 103 aa3.29□□□□□ -1.88
PABPC1-207ENST00000518716 SMIM2Q9BVW6 85 aa3.29□□□□□ -1.88
PABPC1-207ENST00000518716 LINC00846Q9NV44 126 aa3.29□□□□□ -1.88
PABPC1-207ENST00000518716 PRLHP81277 87 aa3.27□□□□□ -1.89
PABPC1-207ENST00000518716 C20orf166-AS1Q96NR2 134 aa3.27□□□□□ -1.89
PABPC1-207ENST00000518716 LINC01558Q9Y6Z2 57 aa3.27□□□□□ -1.89
PABPC1-207ENST00000518716 IGIPA6NJ69 53 aa3.26□□□□□ -1.89
PABPC1-207ENST00000518716 H0YGX0 51 aa3.26□□□□□ -1.89
PABPC1-207ENST00000518716 SPINK1P00995 79 aa3.26□□□□□ -1.89
PABPC1-207ENST00000518716 Q8N377 158 aa3.26□□□□□ -1.89
PABPC1-207ENST00000518716 SPRR4Q96PI1 79 aa3.26□□□□□ -1.89
PABPC1-207ENST00000518716 IGKV2-28A0A075B6P5 120 aa3.25□□□□□ -1.89
PABPC1-207ENST00000518716 IGKV2D-28P01615 120 aa3.25□□□□□ -1.89
PABPC1-207ENST00000518716 RPS29P62273 56 aaKnown RBP3.25□□□□□ -1.89
PABPC1-207ENST00000518716 TOMM7Q9P0U1 55 aa3.25□□□□□ -1.89
PABPC1-207ENST00000518716 CDKN2A-AS1Q9UH64 79 aa3.25□□□□□ -1.89
PABPC1-207ENST00000518716 A0A1W2PNM2 257 aa3.24□□□□□ -1.89
PABPC1-207ENST00000518716 COX7B2Q8TF08 81 aa3.24□□□□□ -1.89
PABPC1-207ENST00000518716 LINC00208Q96KT6 92 aa3.24□□□□□ -1.89
PABPC1-207ENST00000518716 LINC00483Q53H64 154 aa3.23□□□□□ -1.89
PABPC1-207ENST00000518716 PCOTHQ58A44 107 aa3.23□□□□□ -1.89
PABPC1-207ENST00000518716 HIGD2AQ9BW72 106 aa3.23□□□□□ -1.89
PABPC1-207ENST00000518716 A8MUU9 505 aa3.22□□□□□ -1.89
PABPC1-207ENST00000518716 NEBP20929 6669 aa3.22□□□□□ -1.89
PABPC1-207ENST00000518716 UQCR11O14957 56 aa3.21□□□□□ -1.9
PABPC1-207ENST00000518716 CSAG1Q6PB30 78 aa3.21□□□□□ -1.9
PABPC1-207ENST00000518716 A8MU10 97 aa3.2□□□□□ -1.9
PABPC1-207ENST00000518716 M0R2T5 61 aa3.2□□□□□ -1.9
PABPC1-207ENST00000518716 SPRR1AP35321 89 aa3.2□□□□□ -1.9
PABPC1-207ENST00000518716 SSBP3-AS1Q7Z2R9 100 aa3.2□□□□□ -1.9
PABPC1-207ENST00000518716 ZCCHC13Q8WW36 166 aaKnown RBP3.2□□□□□ -1.9
PABPC1-207ENST00000518716 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
PABPC1-207ENST00000518716 H0Y9P7 68 aa3.19□□□□□ -1.9
PABPC1-207ENST00000518716 LOC110117498A0A087WWA1 95 aa3.18□□□□□ -1.9
PABPC1-207ENST00000518716 KRTAP25-1Q3LHN0 102 aa3.18□□□□□ -1.9
PABPC1-207ENST00000518716 A0A1B0GU33 70 aa3.16□□□□□ -1.9
PABPC1-207ENST00000518716 COX17Q14061 63 aa3.16□□□□□ -1.9
PABPC1-207ENST00000518716 KCNQ1DNQ9H478 68 aa3.16□□□□□ -1.9
PABPC1-207ENST00000518716 P0C880 135 aa3.15□□□□□ -1.91
PABPC1-207ENST00000518716 SPATA8Q6RVD6 105 aa3.15□□□□□ -1.91
PABPC1-207ENST00000518716 C9orf92A6NGG3 77 aa3.13□□□□□ -1.91
PABPC1-207ENST00000518716 Q5W150 140 aa3.13□□□□□ -1.91
PABPC1-207ENST00000518716 ZNF625Q96I27 306 aaPredicted RBP3.13□□□□□ -1.91
PABPC1-207ENST00000518716 RPL37P61927 97 aaKnown RBP3.12□□□□□ -1.91
PABPC1-207ENST00000518716 COX6B2Q6YFQ2 88 aa3.12□□□□□ -1.91
PABPC1-207ENST00000518716 ETDCA0A1B0GVM5 59 aa3.11□□□□□ -1.91
PABPC1-207ENST00000518716 IGLV6-57P01721 117 aa3.1□□□□□ -1.91
PABPC1-207ENST00000518716 ST20-AS1Q8NBB2 130 aa3.1□□□□□ -1.91
PABPC1-207ENST00000518716 MT2AP02795 61 aa3.09□□□□□ -1.91
PABPC1-207ENST00000518716 KRTAP6-3Q3LI67 103 aa3.09□□□□□ -1.91
PABPC1-207ENST00000518716 Q6ZRX8 168 aa3.09□□□□□ -1.91
PABPC1-207ENST00000518716 MUC12Q9UKN1 5478 aa3.09□□□□□ -1.92
PABPC1-207ENST00000518716 SPRR1BP22528 89 aa3.08□□□□□ -1.92
PABPC1-207ENST00000518716 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
PABPC1-207ENST00000518716 NCR3O14931 201 aa3.07□□□□□ -1.92
PABPC1-207ENST00000518716 MT1FP04733 61 aa3.07□□□□□ -1.92
PABPC1-207ENST00000518716 LINC00158P58513 81 aa3.07□□□□□ -1.92
PABPC1-207ENST00000518716 DEFB116Q30KQ4 102 aa3.07□□□□□ -1.92
PABPC1-207ENST00000518716 KRTAP19-6Q3LI70 58 aa3.07□□□□□ -1.92
PABPC1-207ENST00000518716 SPINK7P58062 85 aa3.06□□□□□ -1.92
PABPC1-207ENST00000518716 COA5Q86WW8 74 aa3.06□□□□□ -1.92
PABPC1-207ENST00000518716 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
PABPC1-207ENST00000518716 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
PABPC1-207ENST00000518716 LINC00308Q8TCZ7 52 aa3.04□□□□□ -1.92
PABPC1-207ENST00000518716 IGKV4-1P06312 121 aa3.03□□□□□ -1.92
PABPC1-207ENST00000518716 COX7BP24311 80 aa3.02□□□□□ -1.93
PABPC1-207ENST00000518716 SPINT4Q6UDR6 99 aa3.02□□□□□ -1.93
PABPC1-207ENST00000518716 PRO2289Q9P1D8 64 aa3.01□□□□□ -1.93
PABPC1-207ENST00000518716 A0A1B0GU69 56 aa2.99□□□□□ -1.93
PABPC1-207ENST00000518716 KRTAP10-10P60014 251 aa2.99□□□□□ -1.93
PABPC1-207ENST00000518716 A0A0G2JQZ4 141 aa2.98□□□□□ -1.93
PABPC1-207ENST00000518716 DSCR10P59022 87 aa2.97□□□□□ -1.93
PABPC1-207ENST00000518716 IGLV5-48A0A075B6I7 105 aa2.95□□□□□ -1.94
PABPC1-207ENST00000518716 SMIM11BQ8TCY0 68 aa2.95□□□□□ -1.94
PABPC1-207ENST00000518716 LINC00472Q9H8W2 130 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 319.5 ms