RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 GLI2P10070 1586 aa-5.55□□□□□ -3.3
SNORA40.16-201ENST00000517238 CCDC180Q9P1Z9 1646 aa-5.55□□□□□ -3.3
SNORA40.16-201ENST00000517238 LMO7Q8WWI1 1683 aa-5.55□□□□□ -3.3
SNORA40.16-201ENST00000517238 MYMXA0A1B0GTQ4 84 aa-5.55□□□□□ -3.3
SNORA40.16-201ENST00000517238 S100A1P23297 94 aa-5.55□□□□□ -3.3
SNORA40.16-201ENST00000517238 COL5A1-AS1Q5SY13 56 aa-5.55□□□□□ -3.3
SNORA40.16-201ENST00000517238 SMIM11AP58511 58 aa-5.56□□□□□ -3.3
SNORA40.16-201ENST00000517238 C2orf88Q9BSF0 95 aa-5.56□□□□□ -3.3
SNORA40.16-201ENST00000517238 RABAC1Q9UI14 185 aa-5.56□□□□□ -3.3
SNORA40.16-201ENST00000517238 DIP2AQ14689 1571 aa-5.57□□□□□ -3.3
SNORA40.16-201ENST00000517238 NBEAP1P0C6P0 100 aa-5.57□□□□□ -3.3
SNORA40.16-201ENST00000517238 SCRIBQ14160 1630 aa-5.57□□□□□ -3.3
SNORA40.16-201ENST00000517238 CEBPZOSA8MTT3 80 aa-5.58□□□□□ -3.3
SNORA40.16-201ENST00000517238 GNG7O60262 68 aa-5.58□□□□□ -3.3
SNORA40.16-201ENST00000517238 SNAPC5O75971 98 aa-5.58□□□□□ -3.3
SNORA40.16-201ENST00000517238 CHMP6Q96FZ7 201 aa-5.59□□□□□ -3.3
SNORA40.16-201ENST00000517238 FAUP35544 74 aaKnown RBP-5.6□□□□□ -3.31
SNORA40.16-201ENST00000517238 LINC00470Q9BZP3 86 aa-5.6□□□□□ -3.31
SNORA40.16-201ENST00000517238 ABCC6O95255 1503 aa-5.6□□□□□ -3.31
SNORA40.16-201ENST00000517238 CFAP43Q8NDM7 1665 aa-5.62□□□□□ -3.31
SNORA40.16-201ENST00000517238 MROH1Q8NDA8 1641 aa-5.62□□□□□ -3.31
SNORA40.16-201ENST00000517238 HTN1P15515 57 aa-5.63□□□□□ -3.31
SNORA40.16-201ENST00000517238 DEFB131AP59861 70 aa-5.63□□□□□ -3.31
SNORA40.16-201ENST00000517238 SMIM15Q7Z3B0 74 aa-5.64□□□□□ -3.31
SNORA40.16-201ENST00000517238 NRKQ7Z2Y5 1582 aa-5.64□□□□□ -3.31
SNORA40.16-201ENST00000517238 PZPP20742 1482 aa-5.64□□□□□ -3.31
SNORA40.16-201ENST00000517238 VPS8Q8N3P4 1428 aa-5.65□□□□□ -3.31
SNORA40.16-201ENST00000517238 ENHOQ6UWT2 76 aa-5.66□□□□□ -3.32
SNORA40.16-201ENST00000517238 AKAP12Q02952 1782 aa-5.67□□□□□ -3.32
SNORA40.16-201ENST00000517238 FABP1P07148 127 aa-5.67□□□□□ -3.32
SNORA40.16-201ENST00000517238 PVALEFA0A1B0GWK0 134 aa-5.68□□□□□ -3.32
SNORA40.16-201ENST00000517238 RHPN1-AS1Q9BWJ2 59 aa-5.68□□□□□ -3.32
SNORA40.16-201ENST00000517238 NMES1Q9C002 83 aa-5.68□□□□□ -3.32
SNORA40.16-201ENST00000517238 TIAM1Q13009 1591 aa-5.69□□□□□ -3.32
SNORA40.16-201ENST00000517238 ANKARQ7Z5J8 1434 aa-5.71□□□□□ -3.32
SNORA40.16-201ENST00000517238 DEFB114Q30KQ6 69 aa-5.72□□□□□ -3.33
SNORA40.16-201ENST00000517238 GNG14A0A1W2PPG7 69 aa-5.73□□□□□ -3.33
SNORA40.16-201ENST00000517238 PPP3R1P63098 170 aa-5.74□□□□□ -3.33
SNORA40.16-201ENST00000517238 A0A087WXM4 84 aa-5.75□□□□□ -3.33
SNORA40.16-201ENST00000517238 LINC00308Q8TCZ7 52 aa-5.75□□□□□ -3.33
SNORA40.16-201ENST00000517238 MYO3AQ8NEV4 1616 aa-5.75□□□□□ -3.33
SNORA40.16-201ENST00000517238 NALCNQ8IZF0 1738 aa-5.77□□□□□ -3.33
SNORA40.16-201ENST00000517238 MADDQ8WXG6 1647 aa-5.77□□□□□ -3.33
SNORA40.16-201ENST00000517238 DEFB104AQ8WTQ1 72 aa-5.77□□□□□ -3.33
SNORA40.16-201ENST00000517238 MROH2AA6NES4 1674 aa-5.78□□□□□ -3.33
SNORA40.16-201ENST00000517238 ATP5EP2Q5VTU8 51 aa-5.78□□□□□ -3.33
SNORA40.16-201ENST00000517238 GNG4P50150 75 aa-5.79□□□□□ -3.34
SNORA40.16-201ENST00000517238 TMEM167BQ9NRX6 74 aa-5.79□□□□□ -3.34
SNORA40.16-201ENST00000517238 A0A096LNI7 61 aa-5.81□□□□□ -3.34
SNORA40.16-201ENST00000517238 LINC00643Q86TS7 51 aa-5.81□□□□□ -3.34
SNORA40.16-201ENST00000517238 TMEM203Q969S6 136 aa-5.82□□□□□ -3.34
SNORA40.16-201ENST00000517238 SMIM13P0DJ93 91 aa-5.83□□□□□ -3.34
SNORA40.16-201ENST00000517238 KDM5DQ9BY66 1539 aa-5.84□□□□□ -3.34
SNORA40.16-201ENST00000517238 ALS2Q96Q42 1657 aa-5.84□□□□□ -3.34
SNORA40.16-201ENST00000517238 SMIM2Q9BVW6 85 aa-5.84□□□□□ -3.34
SNORA40.16-201ENST00000517238 GYPAP02724 150 aa-5.85□□□□□ -3.35
SNORA40.16-201ENST00000517238 GTF2H5Q6ZYL4 71 aa-5.85□□□□□ -3.35
SNORA40.16-201ENST00000517238 SNRPFP62306 86 aaKnown RBP-5.86□□□□□ -3.35
SNORA40.16-201ENST00000517238 H3BUT2 72 aa-5.92□□□□□ -3.36
SNORA40.16-201ENST00000517238 TSC22D3Q99576 134 aa-5.92□□□□□ -3.36
SNORA40.16-201ENST00000517238 CEP162Q5TB80 1403 aa-5.92□□□□□ -3.36
SNORA40.16-201ENST00000517238 DLEU1O43261 78 aa-5.93□□□□□ -3.36
SNORA40.16-201ENST00000517238 EFCAB6Q5THR3 1501 aa-5.94□□□□□ -3.36
SNORA40.16-201ENST00000517238 CORTO00230 105 aa-5.95□□□□□ -3.36
SNORA40.16-201ENST00000517238 NFAT5O94916 1531 aa-5.97□□□□□ -3.37
SNORA40.16-201ENST00000517238 LMTK2Q8IWU2 1503 aa-5.97□□□□□ -3.37
SNORA40.16-201ENST00000517238 K7EMI3 77 aa-5.97□□□□□ -3.37
SNORA40.16-201ENST00000517238 GOLGB1Q14789 3259 aaKnown RBP-5.98□□□□□ -3.37
SNORA40.16-201ENST00000517238 PTMSP20962 102 aa-5.98□□□□□ -3.37
SNORA40.16-201ENST00000517238 S100A10P60903 97 aa-5.99□□□□□ -3.37
SNORA40.16-201ENST00000517238 SNHG12Q9BXW3 62 aa-5.99□□□□□ -3.37
SNORA40.16-201ENST00000517238 LINC01590Q5TEZ4 76 aa-6□□□□□ -3.37
SNORA40.16-201ENST00000517238 DEFB124Q8NES8 71 aa-6.04□□□□□ -3.38
SNORA40.16-201ENST00000517238 DEFB121Q5J5C9 76 aa-6.06□□□□□ -3.38
SNORA40.16-201ENST00000517238 LINC01556Q5JQF7 62 aa-6.07□□□□□ -3.38
SNORA40.16-201ENST00000517238 NCMAPQ5T1S8 102 aa-6.07□□□□□ -3.38
SNORA40.16-201ENST00000517238 DUOX2Q9NRD8 1548 aa-6.08□□□□□ -3.38
SNORA40.16-201ENST00000517238 SYCP2Q9BX26 1530 aa-6.09□□□□□ -3.38
SNORA40.16-201ENST00000517238 H3BVH4 76 aa-6.09□□□□□ -3.38
SNORA40.16-201ENST00000517238 M0R1W7 72 aa-6.09□□□□□ -3.38
SNORA40.16-201ENST00000517238 NDUFA2O43678 99 aa-6.1□□□□□ -3.39
SNORA40.16-201ENST00000517238 TCEAL7Q9BRU2 100 aa-6.1□□□□□ -3.39
SNORA40.16-201ENST00000517238 PEG3Q9GZU2 1588 aa-6.1□□□□□ -3.39
SNORA40.16-201ENST00000517238 DDX60Q8IY21 1712 aaKnown RBP-6.11□□□□□ -3.39
SNORA40.16-201ENST00000517238 KANTRA0A1W2PQU2 76 aa-6.11□□□□□ -3.39
SNORA40.16-201ENST00000517238 HMGN1P05114 100 aa-6.11□□□□□ -3.39
SNORA40.16-201ENST00000517238 S100ZQ8WXG8 99 aa-6.13□□□□□ -3.39
SNORA40.16-201ENST00000517238 A0A1B0GV90 55 aa-6.14□□□□□ -3.39
SNORA40.16-201ENST00000517238 TOMM7Q9P0U1 55 aa-6.14□□□□□ -3.39
SNORA40.16-201ENST00000517238 RB1CC1Q8TDY2 1594 aa-6.14□□□□□ -3.39
SNORA40.16-201ENST00000517238 ATXN8Q156A1 80 aa-6.15□□□□□ -3.39
SNORA40.16-201ENST00000517238 S100A16Q96FQ6 103 aaKnown RBP-6.15□□□□□ -3.39
SNORA40.16-201ENST00000517238 GNG8Q9UK08 70 aa-6.16□□□□□ -3.4
SNORA40.16-201ENST00000517238 TFF3Q07654 80 aa-6.17□□□□□ -3.4
SNORA40.16-201ENST00000517238 SERF2P84101 59 aa-6.2□□□□□ -3.4
SNORA40.16-201ENST00000517238 PYY3Q5JQD4 70 aa-6.2□□□□□ -3.4
SNORA40.16-201ENST00000517238 S100A12P80511 92 aa-6.23□□□□□ -3.41
SNORA40.16-201ENST00000517238 AGLP35573 1532 aa-6.25□□□□□ -3.41
SNORA40.16-201ENST00000517238 H0YGX0 51 aa-6.26□□□□□ -3.41
SNORA40.16-201ENST00000517238 IGIPA6NJ69 53 aa-6.29□□□□□ -3.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms