RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 FAUP35544 74 aaKnown RBP-6.83□□□□□ -3.5
RNU6-539P-201ENST00000516665 NALCNQ8IZF0 1738 aa-6.84□□□□□ -3.51
RNU6-539P-201ENST00000516665 RBP2P50120 134 aa-6.85□□□□□ -3.51
RNU6-539P-201ENST00000516665 TTC37Q6PGP7 1564 aa-6.86□□□□□ -3.51
RNU6-539P-201ENST00000516665 RRBP1Q9P2E9 1410 aaKnown RBP-6.86□□□□□ -3.51
RNU6-539P-201ENST00000516665 RALGAPBQ86X10 1494 aa-6.86□□□□□ -3.51
RNU6-539P-201ENST00000516665 CEBPZOSA8MTT3 80 aa-6.87□□□□□ -3.51
RNU6-539P-201ENST00000516665 HMGA1P17096 107 aaKnown RBP-6.87□□□□□ -3.51
RNU6-539P-201ENST00000516665 EIF2AK4Q9P2K8 1649 aaKnown RBP-6.87□□□□□ -3.51
RNU6-539P-201ENST00000516665 PEA15Q15121 130 aa-6.88□□□□□ -3.51
RNU6-539P-201ENST00000516665 SMIM11AP58511 58 aa-6.9□□□□□ -3.51
RNU6-539P-201ENST00000516665 PPP3R1P63098 170 aa-6.9□□□□□ -3.51
RNU6-539P-201ENST00000516665 AKAP12Q02952 1782 aa-6.9□□□□□ -3.51
RNU6-539P-201ENST00000516665 MYO3AQ8NEV4 1616 aa-6.9□□□□□ -3.51
RNU6-539P-201ENST00000516665 GLI2P10070 1586 aa-6.91□□□□□ -3.51
RNU6-539P-201ENST00000516665 RABAC1Q9UI14 185 aa-6.91□□□□□ -3.52
RNU6-539P-201ENST00000516665 SARNPP82979 210 aaKnown RBP-6.93□□□□□ -3.52
RNU6-539P-201ENST00000516665 SMIM27A0A1W2PRY6 76 aa-6.94□□□□□ -3.52
RNU6-539P-201ENST00000516665 WFDC10BQ8IUB3 73 aa-6.94□□□□□ -3.52
RNU6-539P-201ENST00000516665 DIP2AQ14689 1571 aa-6.95□□□□□ -3.52
RNU6-539P-201ENST00000516665 ABCC6O95255 1503 aa-6.95□□□□□ -3.52
RNU6-539P-201ENST00000516665 S100A1P23297 94 aa-6.95□□□□□ -3.52
RNU6-539P-201ENST00000516665 C3P01024 1663 aa-6.96□□□□□ -3.52
RNU6-539P-201ENST00000516665 GNG4P50150 75 aa-6.96□□□□□ -3.52
RNU6-539P-201ENST00000516665 LMO7Q8WWI1 1683 aa-6.99□□□□□ -3.53
RNU6-539P-201ENST00000516665 MROH1Q8NDA8 1641 aa-7.01□□□□□ -3.53
RNU6-539P-201ENST00000516665 ENHOQ6UWT2 76 aa-7.02□□□□□ -3.53
RNU6-539P-201ENST00000516665 CCDC180Q9P1Z9 1646 aa-7.03□□□□□ -3.53
RNU6-539P-201ENST00000516665 TMEM203Q969S6 136 aa-7.04□□□□□ -3.54
RNU6-539P-201ENST00000516665 C2orf88Q9BSF0 95 aa-7.05□□□□□ -3.54
RNU6-539P-201ENST00000516665 TIAM1Q13009 1591 aa-7.05□□□□□ -3.54
RNU6-539P-201ENST00000516665 PVALEFA0A1B0GWK0 134 aa-7.09□□□□□ -3.54
RNU6-539P-201ENST00000516665 SCRIBQ14160 1630 aa-7.11□□□□□ -3.55
RNU6-539P-201ENST00000516665 CORTO00230 105 aa-7.11□□□□□ -3.55
RNU6-539P-201ENST00000516665 GTF2H5Q6ZYL4 71 aa-7.11□□□□□ -3.55
RNU6-539P-201ENST00000516665 DEFB114Q30KQ6 69 aa-7.12□□□□□ -3.55
RNU6-539P-201ENST00000516665 LINC00643Q86TS7 51 aa-7.12□□□□□ -3.55
RNU6-539P-201ENST00000516665 DLEU1O43261 78 aa-7.13□□□□□ -3.55
RNU6-539P-201ENST00000516665 DEFB133Q30KQ1 61 aa-7.13□□□□□ -3.55
RNU6-539P-201ENST00000516665 UTRNP46939 3433 aa-7.14□□□□□ -3.55
RNU6-539P-201ENST00000516665 ATP5EP2Q5VTU8 51 aa-7.15□□□□□ -3.55
RNU6-539P-201ENST00000516665 KDM5DQ9BY66 1539 aa-7.16□□□□□ -3.56
RNU6-539P-201ENST00000516665 NDUFA2O43678 99 aa-7.16□□□□□ -3.56
RNU6-539P-201ENST00000516665 A0A087WXM4 84 aa-7.17□□□□□ -3.56
RNU6-539P-201ENST00000516665 SMIM13P0DJ93 91 aa-7.18□□□□□ -3.56
RNU6-539P-201ENST00000516665 DEFB131AP59861 70 aa-7.18□□□□□ -3.56
RNU6-539P-201ENST00000516665 SNRPFP62306 86 aaKnown RBP-7.2□□□□□ -3.56
RNU6-539P-201ENST00000516665 CEP162Q5TB80 1403 aa-7.2□□□□□ -3.56
RNU6-539P-201ENST00000516665 TSC22D3Q99576 134 aa-7.21□□□□□ -3.56
RNU6-539P-201ENST00000516665 LINC00308Q8TCZ7 52 aa-7.24□□□□□ -3.57
RNU6-539P-201ENST00000516665 MADDQ8WXG6 1647 aa-7.25□□□□□ -3.57
RNU6-539P-201ENST00000516665 NMES1Q9C002 83 aa-7.28□□□□□ -3.57
RNU6-539P-201ENST00000516665 CD52P31358 61 aa-7.29□□□□□ -3.58
RNU6-539P-201ENST00000516665 MROH2AA6NES4 1674 aa-7.29□□□□□ -3.58
RNU6-539P-201ENST00000516665 GYPAP02724 150 aa-7.3□□□□□ -3.58
RNU6-539P-201ENST00000516665 S100A10P60903 97 aa-7.31□□□□□ -3.58
RNU6-539P-201ENST00000516665 A0A1B0GV90 55 aa-7.33□□□□□ -3.58
RNU6-539P-201ENST00000516665 TMEM167BQ9NRX6 74 aa-7.33□□□□□ -3.58
RNU6-539P-201ENST00000516665 LMTK2Q8IWU2 1503 aa-7.34□□□□□ -3.58
RNU6-539P-201ENST00000516665 ALS2Q96Q42 1657 aa-7.35□□□□□ -3.59
RNU6-539P-201ENST00000516665 ANKARQ7Z5J8 1434 aa-7.38□□□□□ -3.59
RNU6-539P-201ENST00000516665 DEFB121Q5J5C9 76 aa-7.39□□□□□ -3.59
RNU6-539P-201ENST00000516665 HTN1P15515 57 aa-7.42□□□□□ -3.6
RNU6-539P-201ENST00000516665 GNG8Q9UK08 70 aa-7.42□□□□□ -3.6
RNU6-539P-201ENST00000516665 EFCAB6Q5THR3 1501 aa-7.42□□□□□ -3.6
RNU6-539P-201ENST00000516665 VPS8Q8N3P4 1428 aa-7.43□□□□□ -3.6
RNU6-539P-201ENST00000516665 RHPN1-AS1Q9BWJ2 59 aa-7.44□□□□□ -3.6
RNU6-539P-201ENST00000516665 NCMAPQ5T1S8 102 aa-7.46□□□□□ -3.6
RNU6-539P-201ENST00000516665 LOC105371267A0A1B0GV96 52 aa-7.48□□□□□ -3.61
RNU6-539P-201ENST00000516665 H3BUT2 72 aa-7.51□□□□□ -3.61
RNU6-539P-201ENST00000516665 K7EMI3 77 aa-7.51□□□□□ -3.61
RNU6-539P-201ENST00000516665 S100A16Q96FQ6 103 aaKnown RBP-7.53□□□□□ -3.61
RNU6-539P-201ENST00000516665 TCEAL7Q9BRU2 100 aa-7.53□□□□□ -3.61
RNU6-539P-201ENST00000516665 A0A096LNI7 61 aa-7.56□□□□□ -3.62
RNU6-539P-201ENST00000516665 SMIM2Q9BVW6 85 aa-7.56□□□□□ -3.62
RNU6-539P-201ENST00000516665 KANTRA0A1W2PQU2 76 aa-7.57□□□□□ -3.62
RNU6-539P-201ENST00000516665 PYY3Q5JQD4 70 aa-7.57□□□□□ -3.62
RNU6-539P-201ENST00000516665 H3BVH4 76 aa-7.59□□□□□ -3.62
RNU6-539P-201ENST00000516665 M0R1W7 72 aa-7.6□□□□□ -3.63
RNU6-539P-201ENST00000516665 SYCP2Q9BX26 1530 aa-7.61□□□□□ -3.63
RNU6-539P-201ENST00000516665 HMGN1P05114 100 aa-7.64□□□□□ -3.63
RNU6-539P-201ENST00000516665 DEFB104AQ8WTQ1 72 aa-7.67□□□□□ -3.64
RNU6-539P-201ENST00000516665 SNHG12Q9BXW3 62 aa-7.68□□□□□ -3.64
RNU6-539P-201ENST00000516665 ATXN8Q156A1 80 aa-7.69□□□□□ -3.64
RNU6-539P-201ENST00000516665 GOLGB1Q14789 3259 aaKnown RBP-7.7□□□□□ -3.64
RNU6-539P-201ENST00000516665 ABCC3O15438 1527 aa-7.72□□□□□ -3.64
RNU6-539P-201ENST00000516665 DDX60Q8IY21 1712 aaKnown RBP-7.72□□□□□ -3.65
RNU6-539P-201ENST00000516665 CNTLNQ9NXG0 1405 aa-7.74□□□□□ -3.65
RNU6-539P-201ENST00000516665 TFF3Q07654 80 aa-7.75□□□□□ -3.65
RNU6-539P-201ENST00000516665 LINC01590Q5TEZ4 76 aa-7.77□□□□□ -3.65
RNU6-539P-201ENST00000516665 PEG3Q9GZU2 1588 aa-7.78□□□□□ -3.65
RNU6-539P-201ENST00000516665 TDRG1Q3Y452 100 aa-7.79□□□□□ -3.66
RNU6-539P-201ENST00000516665 NFAT5O94916 1531 aa-7.81□□□□□ -3.66
RNU6-539P-201ENST00000516665 IGIPA6NJ69 53 aa-7.81□□□□□ -3.66
RNU6-539P-201ENST00000516665 ABCA8O94911 1581 aa-7.81□□□□□ -3.66
RNU6-539P-201ENST00000516665 LINC00587B1AMM8 73 aa-7.82□□□□□ -3.66
RNU6-539P-201ENST00000516665 RB1CC1Q8TDY2 1594 aa-7.84□□□□□ -3.67
RNU6-539P-201ENST00000516665 DEFB124Q8NES8 71 aa-7.85□□□□□ -3.67
RNU6-539P-201ENST00000516665 DUOX2Q9NRD8 1548 aa-7.86□□□□□ -3.67
RNU6-539P-201ENST00000516665 C14orf144Q96I85 54 aa-7.86□□□□□ -3.67
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms