RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 KRTAP10-4P60372 401 aaPredicted RBP7.18□□□□□ -1.26
TRIM41-207ENST00000515223 CRCT1Q9UGL9 99 aa7.17□□□□□ -1.26
TRIM41-207ENST00000515223 KRTAP4-5Q9BYR2 181 aa7.12□□□□□ -1.27
TRIM41-207ENST00000515223 DNAH11Q96DT5 4516 aa7.08□□□□□ -1.28
TRIM41-207ENST00000515223 ALMS1Q8TCU4 4167 aa7.07□□□□□ -1.28
TRIM41-207ENST00000515223 DNAH17Q9UFH2 4485 aa7.05□□□□□ -1.28
TRIM41-207ENST00000515223 DNAH8Q96JB1 4490 aa7.04□□□□□ -1.28
TRIM41-207ENST00000515223 DNAH3Q8TD57 4116 aa7.02□□□□□ -1.29
TRIM41-207ENST00000515223 VPS13DQ5THJ4 4388 aa7.01□□□□□ -1.29
TRIM41-207ENST00000515223 DNAH5Q8TE73 4624 aa7□□□□□ -1.29
TRIM41-207ENST00000515223 KRTAP12-3P60328 96 aa6.98□□□□□ -1.29
TRIM41-207ENST00000515223 DNAH2Q9P225 4427 aa6.97□□□□□ -1.29
TRIM41-207ENST00000515223 LORP23490 312 aaPredicted RBP6.96□□□□□ -1.3
TRIM41-207ENST00000515223 STARD9Q9P2P6 4700 aa6.95□□□□□ -1.3
TRIM41-207ENST00000515223 ANK2Q01484 3957 aa6.95□□□□□ -1.3
TRIM41-207ENST00000515223 INE1O15225 51 aa6.94□□□□□ -1.3
TRIM41-207ENST00000515223 FRAS1Q86XX4 4008 aa6.92□□□□□ -1.3
TRIM41-207ENST00000515223 LYSTQ99698 3801 aa6.83□□□□□ -1.32
TRIM41-207ENST00000515223 KMT2AQ03164 3969 aa6.83□□□□□ -1.32
TRIM41-207ENST00000515223 KRTAP23-1A1A580 65 aa6.82□□□□□ -1.32
TRIM41-207ENST00000515223 KRTAP8-1Q8IUC2 63 aa6.81□□□□□ -1.32
TRIM41-207ENST00000515223 CMYA5Q8N3K9 4069 aa6.8□□□□□ -1.32
TRIM41-207ENST00000515223 LRP1BQ9NZR2 4599 aa6.79□□□□□ -1.32
TRIM41-207ENST00000515223 LCE3AQ5TA76 89 aa6.79□□□□□ -1.32
TRIM41-207ENST00000515223 FAT1Q14517 4588 aa6.72□□□□□ -1.33
TRIM41-207ENST00000515223 VPS13BQ7Z7G8 4022 aa6.7□□□□□ -1.34
TRIM41-207ENST00000515223 DYNC1H1Q14204 4646 aaKnown RBP6.7□□□□□ -1.34
TRIM41-207ENST00000515223 SACSQ9NZJ4 4579 aa6.68□□□□□ -1.34
TRIM41-207ENST00000515223 DYNC2H1Q8NCM8 4307 aaKnown RBP6.68□□□□□ -1.34
TRIM41-207ENST00000515223 PRKDCP78527 4128 aaKnown RBP6.67□□□□□ -1.34
TRIM41-207ENST00000515223 HECTD4Q9Y4D8 3996 aa6.64□□□□□ -1.35
TRIM41-207ENST00000515223 DNAH7Q8WXX0 4024 aa6.64□□□□□ -1.35
TRIM41-207ENST00000515223 DNAH6Q9C0G6 4158 aa6.6□□□□□ -1.35
TRIM41-207ENST00000515223 KRTAP10-5P60370 271 aa6.59□□□□□ -1.35
TRIM41-207ENST00000515223 FAT2Q9NYQ8 4349 aa6.58□□□□□ -1.36
TRIM41-207ENST00000515223 DNHD1Q96M86 4753 aa6.57□□□□□ -1.36
TRIM41-207ENST00000515223 KRTAP4-1Q9BYQ7 146 aa6.56□□□□□ -1.36
TRIM41-207ENST00000515223 MT1HP80294 61 aa6.47□□□□□ -1.37
TRIM41-207ENST00000515223 APOBP04114 4563 aaKnown RBP6.46□□□□□ -1.37
TRIM41-207ENST00000515223 MYCBP2O75592 4640 aa6.39□□□□□ -1.39
TRIM41-207ENST00000515223 MT2AP02795 61 aa6.38□□□□□ -1.39
TRIM41-207ENST00000515223 SPRR2FQ96RM1 72 aa6.33□□□□□ -1.4
TRIM41-207ENST00000515223 KRTAP10-7P60409 375 aaPredicted RBP6.33□□□□□ -1.4
TRIM41-207ENST00000515223 RYR1P21817 5038 aa6.31□□□□□ -1.4
TRIM41-207ENST00000515223 SPRR2GQ9BYE4 73 aa6.3□□□□□ -1.4
TRIM41-207ENST00000515223 LRP1Q07954 4544 aaKnown RBP6.26□□□□□ -1.41
TRIM41-207ENST00000515223 FAT3Q8TDW7 4589 aa6.26□□□□□ -1.41
TRIM41-207ENST00000515223 HYDINQ4G0P3 5121 aa6.21□□□□□ -1.41
TRIM41-207ENST00000515223 MT1FP04733 61 aa6.19□□□□□ -1.42
TRIM41-207ENST00000515223 KRTAP17-1Q9BYP8 105 aa6.19□□□□□ -1.42
TRIM41-207ENST00000515223 PKHD1P08F94 4074 aa6.12□□□□□ -1.43
TRIM41-207ENST00000515223 KRTAP19-5Q3LI72 72 aa6.11□□□□□ -1.43
TRIM41-207ENST00000515223 KRTAP19-4Q3LI73 84 aa6.08□□□□□ -1.44
TRIM41-207ENST00000515223 RYR3Q15413 4870 aa6.04□□□□□ -1.44
TRIM41-207ENST00000515223 PKD1P98161 4303 aa6.04□□□□□ -1.44
TRIM41-207ENST00000515223 LCE3CQ5T5A8 94 aa6□□□□□ -1.45
TRIM41-207ENST00000515223 KIAA1109Q2LD37 5005 aa5.98□□□□□ -1.45
TRIM41-207ENST00000515223 SPRR2EP22531 72 aa5.97□□□□□ -1.45
TRIM41-207ENST00000515223 SPRR2BP35325 72 aa5.97□□□□□ -1.45
TRIM41-207ENST00000515223 SPRR2AP35326 72 aa5.97□□□□□ -1.45
TRIM41-207ENST00000515223 LRP2P98164 4655 aa5.96□□□□□ -1.46
TRIM41-207ENST00000515223 HSPG2P98160 4391 aa5.94□□□□□ -1.46
TRIM41-207ENST00000515223 PKHD1L1Q86WI1 4243 aa5.93□□□□□ -1.46
TRIM41-207ENST00000515223 LPAP08519 4548 aa5.93□□□□□ -1.46
TRIM41-207ENST00000515223 RYR2Q92736 4967 aa5.9□□□□□ -1.47
TRIM41-207ENST00000515223 KRTAP19-1Q8IUB9 90 aa5.88□□□□□ -1.47
TRIM41-207ENST00000515223 TNXBP22105 4242 aa5.86□□□□□ -1.47
TRIM41-207ENST00000515223 KRTAP19-8Q3LI54 63 aa5.83□□□□□ -1.48
TRIM41-207ENST00000515223 KMT2CQ8NEZ4 4911 aaKnown RBP5.82□□□□□ -1.48
TRIM41-207ENST00000515223 SPRR2DP22532 72 aa5.79□□□□□ -1.48
TRIM41-207ENST00000515223 SPRR5A0A1B0GTR4 108 aa5.77□□□□□ -1.48
TRIM41-207ENST00000515223 LCE2BO14633 110 aa5.75□□□□□ -1.49
TRIM41-207ENST00000515223 KRTAP12-4P60329 112 aa5.73□□□□□ -1.49
TRIM41-207ENST00000515223 MT1XP80297 61 aa5.72□□□□□ -1.49
TRIM41-207ENST00000515223 LCE3BQ5TA77 95 aa5.66□□□□□ -1.5
TRIM41-207ENST00000515223 MT1BP07438 61 aa5.63□□□□□ -1.51
TRIM41-207ENST00000515223 MT1GP13640 62 aa5.6□□□□□ -1.51
TRIM41-207ENST00000515223 LCE2CQ5TA81 110 aa5.57□□□□□ -1.52
TRIM41-207ENST00000515223 KRTAP9-8Q9BYQ0 159 aa5.57□□□□□ -1.52
TRIM41-207ENST00000515223 HERC2O95714 4834 aa5.56□□□□□ -1.52
TRIM41-207ENST00000515223 KRTAP19-2Q3LHN2 52 aa5.52□□□□□ -1.53
TRIM41-207ENST00000515223 KRTAP4-8A0A0G2JLE6 195 aa5.5□□□□□ -1.53
TRIM41-207ENST00000515223 KRTAP4-8Q9BYQ9 185 aa5.5□□□□□ -1.53
TRIM41-207ENST00000515223 KRTAP9-3Q9BYQ3 159 aa5.45□□□□□ -1.54
TRIM41-207ENST00000515223 FLGP20930 4061 aaPredicted RBP5.43□□□□□ -1.54
TRIM41-207ENST00000515223 MUC17Q685J3 4493 aa5.41□□□□□ -1.54
TRIM41-207ENST00000515223 HERC1Q15751 4861 aa5.41□□□□□ -1.54
TRIM41-207ENST00000515223 BIRC6Q9NR09 4857 aa5.4□□□□□ -1.55
TRIM41-207ENST00000515223 LCE3DQ9BYE3 92 aa5.37□□□□□ -1.55
TRIM41-207ENST00000515223 KRTAP4-7Q9BYR0 210 aa5.34□□□□□ -1.55
TRIM41-207ENST00000515223 LCE2DQ5TA82 110 aaPredicted RBP5.33□□□□□ -1.56
TRIM41-207ENST00000515223 KRTAP19-3Q7Z4W3 81 aa5.33□□□□□ -1.56
TRIM41-207ENST00000515223 LCE3EQ5T5B0 92 aa5.28□□□□□ -1.56
TRIM41-207ENST00000515223 EPPK1P58107 5090 aaKnown RBP5.25□□□□□ -1.57
TRIM41-207ENST00000515223 PCLOQ9Y6V0 5065 aa5.24□□□□□ -1.57
TRIM41-207ENST00000515223 ABCA13Q86UQ4 5058 aa5.2□□□□□ -1.58
TRIM41-207ENST00000515223 MT1LQ93083 61 aa5.19□□□□□ -1.58
TRIM41-207ENST00000515223 MT1EP04732 61 aa5.13□□□□□ -1.59
TRIM41-207ENST00000515223 KRTAP9-2Q9BYQ4 174 aa5.12□□□□□ -1.59
TRIM41-207ENST00000515223 MT3P25713 68 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms