RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 TRAV13-2A0A0B4J235 113 aa1.63□□□□□ -2.15
PDLIM5-218ENST00000513341 LEPROTO15243 131 aa1.63□□□□□ -2.15
PDLIM5-218ENST00000513341 IGKCP01834 107 aa1.63□□□□□ -2.15
PDLIM5-218ENST00000513341 MT1BP07438 61 aa1.63□□□□□ -2.15
PDLIM5-218ENST00000513341 FABP4P15090 132 aa1.63□□□□□ -2.15
PDLIM5-218ENST00000513341 SPRR2DP22532 72 aa1.63□□□□□ -2.15
PDLIM5-218ENST00000513341 HIST1H4AP62805 103 aaKnown RBP1.63□□□□□ -2.15
PDLIM5-218ENST00000513341 KRTAP19-8Q3LI54 63 aa1.63□□□□□ -2.15
PDLIM5-218ENST00000513341 TEN1Q86WV5 123 aa1.63□□□□□ -2.15
PDLIM5-218ENST00000513341 C8orf17Q9NRJ1 99 aa1.63□□□□□ -2.15
PDLIM5-218ENST00000513341 BPY2O14599 106 aa1.62□□□□□ -2.15
PDLIM5-218ENST00000513341 HIST1H2BKO60814 126 aa1.62□□□□□ -2.15
PDLIM5-218ENST00000513341 HIST1H2BJP06899 126 aa1.62□□□□□ -2.15
PDLIM5-218ENST00000513341 LINC01554Q52M75 96 aa1.62□□□□□ -2.15
PDLIM5-218ENST00000513341 SPRR5A0A1B0GTR4 108 aa1.61□□□□□ -2.15
PDLIM5-218ENST00000513341 SYS1-DBNDD2H3BUS1 97 aa1.61□□□□□ -2.15
PDLIM5-218ENST00000513341 SPINK7P58062 85 aa1.61□□□□□ -2.15
PDLIM5-218ENST00000513341 TSPEAR-AS2P59090 65 aa1.61□□□□□ -2.15
PDLIM5-218ENST00000513341 C7orf65Q6ZTY9 151 aa1.61□□□□□ -2.15
PDLIM5-218ENST00000513341 LINC00308Q8TCZ7 52 aa1.61□□□□□ -2.15
PDLIM5-218ENST00000513341 HIST1H2BLQ99880 126 aa1.61□□□□□ -2.15
PDLIM5-218ENST00000513341 PMCHL2Q9BQD1 86 aa1.61□□□□□ -2.15
PDLIM5-218ENST00000513341 SPRR2GQ9BYE4 73 aa1.61□□□□□ -2.15
PDLIM5-218ENST00000513341 SERP1Q9Y6X1 66 aa1.61□□□□□ -2.15
PDLIM5-218ENST00000513341 DSTQ03001 7570 aaKnown RBP1.61□□□□□ -2.15
PDLIM5-218ENST00000513341 A0A1W2PNM2 257 aa1.6□□□□□ -2.15
PDLIM5-218ENST00000513341 H3BT86 120 aa1.6□□□□□ -2.15
PDLIM5-218ENST00000513341 K7ERS5 55 aa1.6□□□□□ -2.15
PDLIM5-218ENST00000513341 TIMM17BO60830 172 aa1.6□□□□□ -2.15
PDLIM5-218ENST00000513341 TRACP01848 142 aa1.6□□□□□ -2.15
PDLIM5-218ENST00000513341 HIST3H2BBQ8N257 126 aa1.6□□□□□ -2.15
PDLIM5-218ENST00000513341 PPDPFLQ8WWR9 84 aa1.6□□□□□ -2.15
PDLIM5-218ENST00000513341 UQCR10Q9UDW1 63 aa1.6□□□□□ -2.15
PDLIM5-218ENST00000513341 K7EP34 96 aa1.59□□□□□ -2.15
PDLIM5-218ENST00000513341 K7ERJ3 54 aa1.59□□□□□ -2.15
PDLIM5-218ENST00000513341 C3orf79P0CE67 100 aa1.59□□□□□ -2.15
PDLIM5-218ENST00000513341 KRTDAPP60985 99 aa1.59□□□□□ -2.15
PDLIM5-218ENST00000513341 NPC2P61916 151 aa1.59□□□□□ -2.15
PDLIM5-218ENST00000513341 H1FX-AS1Q4G0G2 97 aa1.59□□□□□ -2.15
PDLIM5-218ENST00000513341 SNCGO76070 127 aa1.58□□□□□ -2.16
PDLIM5-218ENST00000513341 MT-ATP8P03928 68 aa1.58□□□□□ -2.16
PDLIM5-218ENST00000513341 LUZP6Q538Z0 58 aa1.58□□□□□ -2.16
PDLIM5-218ENST00000513341 KRTAP8-1Q8IUC2 63 aa1.58□□□□□ -2.16
PDLIM5-218ENST00000513341 F8W1H4 67 aa1.57□□□□□ -2.16
PDLIM5-218ENST00000513341 ATP5EP56381 51 aaPredicted RBP1.57□□□□□ -2.16
PDLIM5-218ENST00000513341 WFDC13Q8IUB5 93 aa1.57□□□□□ -2.16
PDLIM5-218ENST00000513341 ZCCHC13Q8WW36 166 aaKnown RBP1.57□□□□□ -2.16
PDLIM5-218ENST00000513341 A0A087WSZ3 146 aa1.56□□□□□ -2.16
PDLIM5-218ENST00000513341 hADV29S1A0JD25 119 aa1.56□□□□□ -2.16
PDLIM5-218ENST00000513341 COX7CP15954 63 aa1.56□□□□□ -2.16
PDLIM5-218ENST00000513341 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.56□□□□□ -2.16
PDLIM5-218ENST00000513341 LINC00575Q6W349 94 aa1.56□□□□□ -2.16
PDLIM5-218ENST00000513341 Q6ZQY7 126 aa1.56□□□□□ -2.16
PDLIM5-218ENST00000513341 MUSTN1Q8IVN3 82 aa1.56□□□□□ -2.16
PDLIM5-218ENST00000513341 TTTY13Q9BZ97 58 aa1.56□□□□□ -2.16
PDLIM5-218ENST00000513341 IGKV4-1P06312 121 aa1.55□□□□□ -2.16
PDLIM5-218ENST00000513341 SPANXA2-OT1Q8N9U9 137 aa1.55□□□□□ -2.16
PDLIM5-218ENST00000513341 DSCR8Q96T75 97 aa1.55□□□□□ -2.16
PDLIM5-218ENST00000513341 PRO2289Q9P1D8 64 aa1.55□□□□□ -2.16
PDLIM5-218ENST00000513341 A6NED7 52 aa1.54□□□□□ -2.16
PDLIM5-218ENST00000513341 SMIM11BQ8TCY0 68 aa1.54□□□□□ -2.16
PDLIM5-218ENST00000513341 CRIPTQ9P021 101 aa1.54□□□□□ -2.16
PDLIM5-218ENST00000513341 H3BUT2 72 aa1.53□□□□□ -2.16
PDLIM5-218ENST00000513341 ATOX1O00244 68 aa1.53□□□□□ -2.16
PDLIM5-218ENST00000513341 COX8AP10176 69 aa1.53□□□□□ -2.16
PDLIM5-218ENST00000513341 LINC00472Q9H8W2 130 aa1.53□□□□□ -2.16
PDLIM5-218ENST00000513341 SPCS1Q9Y6A9 102 aa1.53□□□□□ -2.16
PDLIM5-218ENST00000513341 KLKP1Q107X0 134 aa1.52□□□□□ -2.17
PDLIM5-218ENST00000513341 BVES-AS1Q5T3Y7 98 aa1.52□□□□□ -2.17
PDLIM5-218ENST00000513341 HIGD1BQ9P298 99 aa1.52□□□□□ -2.17
PDLIM5-218ENST00000513341 IGKV3D-7A0A0C4DH55 119 aa1.51□□□□□ -2.17
PDLIM5-218ENST00000513341 TRBV7-4A0A0J9YYF1 115 aa1.51□□□□□ -2.17
PDLIM5-218ENST00000513341 A0A1W2PPM0 123 aa1.51□□□□□ -2.17
PDLIM5-218ENST00000513341 hDV103S1A0JD37 113 aa1.51□□□□□ -2.17
PDLIM5-218ENST00000513341 H0YGX0 51 aa1.51□□□□□ -2.17
PDLIM5-218ENST00000513341 FXYD2P54710 66 aa1.51□□□□□ -2.17
PDLIM5-218ENST00000513341 SPATA45Q537H7 98 aa1.51□□□□□ -2.17
PDLIM5-218ENST00000513341 KRTAP5-10Q6L8G5 202 aa1.51□□□□□ -2.17
PDLIM5-218ENST00000513341 CSAG1Q6PB30 78 aa1.51□□□□□ -2.17
PDLIM5-218ENST00000513341 C2orf91Q6ZV80 131 aa1.51□□□□□ -2.17
PDLIM5-218ENST00000513341 ADM2Q7Z4H4 148 aa1.51□□□□□ -2.17
PDLIM5-218ENST00000513341 A0A0B4J2C4 111 aa1.5□□□□□ -2.17
PDLIM5-218ENST00000513341 NDUFC1O43677 76 aa1.5□□□□□ -2.17
PDLIM5-218ENST00000513341 SERP2Q8N6R1 65 aa1.5□□□□□ -2.17
PDLIM5-218ENST00000513341 PRO1854Q9UHT4 67 aa1.5□□□□□ -2.17
PDLIM5-218ENST00000513341 AHNAK2Q8IVF2 5795 aa1.5□□□□□ -2.17
PDLIM5-218ENST00000513341 TRAV7A0A075B6U4 112 aa1.49□□□□□ -2.17
PDLIM5-218ENST00000513341 H3BPC8 53 aa1.49□□□□□ -2.17
PDLIM5-218ENST00000513341 H3BQ85 93 aa1.49□□□□□ -2.17
PDLIM5-218ENST00000513341 CCKP06307 115 aa1.49□□□□□ -2.17
PDLIM5-218ENST00000513341 Q1T7F1 81 aa1.49□□□□□ -2.17
PDLIM5-218ENST00000513341 ETDBQ3ZM63 59 aa1.49□□□□□ -2.17
PDLIM5-218ENST00000513341 C14orf132Q9NPU4 83 aa1.49□□□□□ -2.17
PDLIM5-218ENST00000513341 NDUFB1O75438 58 aa1.48□□□□□ -2.17
PDLIM5-218ENST00000513341 COX6CP09669 75 aa1.48□□□□□ -2.17
PDLIM5-218ENST00000513341 ROMO1P60602 79 aa1.48□□□□□ -2.17
PDLIM5-218ENST00000513341 RBM3P98179 157 aaKnown RBP1.48□□□□□ -2.17
PDLIM5-218ENST00000513341 CASC2Q6XLA1 102 aa1.48□□□□□ -2.17
PDLIM5-218ENST00000513341 C1orf64Q8NEQ6 169 aa1.48□□□□□ -2.17
PDLIM5-218ENST00000513341 DNAL4O96015 105 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms