RNA–Protein interactions for RNA: ENST00000513206.5

TRIO-221, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-221ENST00000513206 VPS13BQ7Z7G8 4022 aa7.37□□□□□ -1.23
TRIO-221ENST00000513206 DNAH1Q9P2D7 4330 aa7.36□□□□□ -1.23
TRIO-221ENST00000513206 MT1HL1P0DM35 61 aa7.35□□□□□ -1.23
TRIO-221ENST00000513206 DNAH7Q8WXX0 4024 aa7.32□□□□□ -1.24
TRIO-221ENST00000513206 DNAH2Q9P225 4427 aa7.29□□□□□ -1.24
TRIO-221ENST00000513206 KRTAP4-5Q9BYR2 181 aa7.27□□□□□ -1.25
TRIO-221ENST00000513206 KRTAP10-12P60413 245 aa7.26□□□□□ -1.25
TRIO-221ENST00000513206 CRCT1Q9UGL9 99 aa7.25□□□□□ -1.25
TRIO-221ENST00000513206 HECTD4Q9Y4D8 3996 aa7.19□□□□□ -1.26
TRIO-221ENST00000513206 KRTAP3-2Q9BYR7 98 aa7.17□□□□□ -1.26
TRIO-221ENST00000513206 DNAH9Q9NYC9 4486 aa7.16□□□□□ -1.26
TRIO-221ENST00000513206 PRKDCP78527 4128 aaKnown RBP7.14□□□□□ -1.27
TRIO-221ENST00000513206 KRTAP3-3Q9BYR6 98 aa7.1□□□□□ -1.27
TRIO-221ENST00000513206 KRTAP10-4P60372 401 aaPredicted RBP7.04□□□□□ -1.28
TRIO-221ENST00000513206 DNAH10Q8IVF4 4471 aa7.03□□□□□ -1.28
TRIO-221ENST00000513206 KRTAP23-1A1A580 65 aa6.99□□□□□ -1.29
TRIO-221ENST00000513206 KRTAP12-3P60328 96 aa6.95□□□□□ -1.3
TRIO-221ENST00000513206 DNAH6Q9C0G6 4158 aa6.95□□□□□ -1.3
TRIO-221ENST00000513206 FAT2Q9NYQ8 4349 aa6.93□□□□□ -1.3
TRIO-221ENST00000513206 LCE3AQ5TA76 89 aa6.85□□□□□ -1.31
TRIO-221ENST00000513206 KRTAP8-1Q8IUC2 63 aa6.82□□□□□ -1.32
TRIO-221ENST00000513206 DYNC2H1Q8NCM8 4307 aaKnown RBP6.73□□□□□ -1.33
TRIO-221ENST00000513206 LORP23490 312 aaPredicted RBP6.72□□□□□ -1.33
TRIO-221ENST00000513206 STARD9Q9P2P6 4700 aa6.67□□□□□ -1.34
TRIO-221ENST00000513206 PLECQ15149 4684 aaKnown RBP6.64□□□□□ -1.35
TRIO-221ENST00000513206 VPS13DQ5THJ4 4388 aa6.63□□□□□ -1.35
TRIO-221ENST00000513206 DNAH11Q96DT5 4516 aa6.62□□□□□ -1.35
TRIO-221ENST00000513206 KRTAP10-5P60370 271 aa6.6□□□□□ -1.35
TRIO-221ENST00000513206 PKHD1P08F94 4074 aa6.54□□□□□ -1.36
TRIO-221ENST00000513206 DNAH17Q9UFH2 4485 aa6.54□□□□□ -1.36
TRIO-221ENST00000513206 MT1HP80294 61 aa6.52□□□□□ -1.36
TRIO-221ENST00000513206 DNAH8Q96JB1 4490 aa6.51□□□□□ -1.37
TRIO-221ENST00000513206 KRTAP4-1Q9BYQ7 146 aa6.47□□□□□ -1.37
TRIO-221ENST00000513206 DNAH5Q8TE73 4624 aa6.39□□□□□ -1.39
TRIO-221ENST00000513206 FLGP20930 4061 aaPredicted RBP6.38□□□□□ -1.39
TRIO-221ENST00000513206 LRP1BQ9NZR2 4599 aa6.38□□□□□ -1.39
TRIO-221ENST00000513206 SPRR2FQ96RM1 72 aa6.35□□□□□ -1.39
TRIO-221ENST00000513206 SPRR2GQ9BYE4 73 aa6.34□□□□□ -1.39
TRIO-221ENST00000513206 KRTAP10-7P60409 375 aaPredicted RBP6.34□□□□□ -1.4
TRIO-221ENST00000513206 MT2AP02795 61 aa6.31□□□□□ -1.4
TRIO-221ENST00000513206 PKHD1L1Q86WI1 4243 aa6.21□□□□□ -1.42
TRIO-221ENST00000513206 MT1FP04733 61 aa6.19□□□□□ -1.42
TRIO-221ENST00000513206 KRTAP19-5Q3LI72 72 aa6.19□□□□□ -1.42
TRIO-221ENST00000513206 FAT3Q8TDW7 4589 aa6.1□□□□□ -1.43
TRIO-221ENST00000513206 PKD1P98161 4303 aa6.08□□□□□ -1.44
TRIO-221ENST00000513206 FAT1Q14517 4588 aa6.07□□□□□ -1.44
TRIO-221ENST00000513206 LCE3CQ5T5A8 94 aa6.07□□□□□ -1.44
TRIO-221ENST00000513206 SPRR2EP22531 72 aa6.02□□□□□ -1.45
TRIO-221ENST00000513206 SPRR2BP35325 72 aa6.02□□□□□ -1.45
TRIO-221ENST00000513206 SPRR2AP35326 72 aa6.02□□□□□ -1.45
TRIO-221ENST00000513206 HSPG2P98160 4391 aa6.01□□□□□ -1.45
TRIO-221ENST00000513206 TNXBP22105 4242 aa5.99□□□□□ -1.45
TRIO-221ENST00000513206 APOBP04114 4563 aaKnown RBP5.95□□□□□ -1.46
TRIO-221ENST00000513206 DYNC1H1Q14204 4646 aaKnown RBP5.94□□□□□ -1.46
TRIO-221ENST00000513206 SPRR5A0A1B0GTR4 108 aa5.9□□□□□ -1.46
TRIO-221ENST00000513206 SACSQ9NZJ4 4579 aa5.9□□□□□ -1.46
TRIO-221ENST00000513206 LRP1Q07954 4544 aaKnown RBP5.89□□□□□ -1.47
TRIO-221ENST00000513206 MYCBP2O75592 4640 aa5.87□□□□□ -1.47
TRIO-221ENST00000513206 LPAP08519 4548 aa5.84□□□□□ -1.48
TRIO-221ENST00000513206 KRTAP19-4Q3LI73 84 aa5.83□□□□□ -1.48
TRIO-221ENST00000513206 SPRR2DP22532 72 aa5.82□□□□□ -1.48
TRIO-221ENST00000513206 LCE2BO14633 110 aa5.81□□□□□ -1.48
TRIO-221ENST00000513206 DNHD1Q96M86 4753 aa5.8□□□□□ -1.48
TRIO-221ENST00000513206 LCE3BQ5TA77 95 aa5.78□□□□□ -1.48
TRIO-221ENST00000513206 KRTAP19-1Q8IUB9 90 aa5.75□□□□□ -1.49
TRIO-221ENST00000513206 KRTAP19-8Q3LI54 63 aa5.74□□□□□ -1.49
TRIO-221ENST00000513206 KRTAP12-4P60329 112 aa5.69□□□□□ -1.5
TRIO-221ENST00000513206 MT1XP80297 61 aa5.68□□□□□ -1.5
TRIO-221ENST00000513206 KRTAP17-1Q9BYP8 105 aa5.68□□□□□ -1.5
TRIO-221ENST00000513206 MT1GP13640 62 aa5.64□□□□□ -1.51
TRIO-221ENST00000513206 KRTAP9-8Q9BYQ0 159 aa5.64□□□□□ -1.51
TRIO-221ENST00000513206 KRTAP4-8A0A0G2JLE6 195 aa5.54□□□□□ -1.52
TRIO-221ENST00000513206 KRTAP4-8Q9BYQ9 185 aa5.54□□□□□ -1.52
TRIO-221ENST00000513206 MT1BP07438 61 aa5.52□□□□□ -1.53
TRIO-221ENST00000513206 RYR1P21817 5038 aa5.47□□□□□ -1.53
TRIO-221ENST00000513206 KRTAP9-3Q9BYQ3 159 aa5.46□□□□□ -1.53
TRIO-221ENST00000513206 LRP2P98164 4655 aa5.46□□□□□ -1.54
TRIO-221ENST00000513206 LCE2CQ5TA81 110 aa5.41□□□□□ -1.54
TRIO-221ENST00000513206 LCE3DQ9BYE3 92 aa5.33□□□□□ -1.56
TRIO-221ENST00000513206 LCE2DQ5TA82 110 aaPredicted RBP5.32□□□□□ -1.56
TRIO-221ENST00000513206 KRTAP19-3Q7Z4W3 81 aa5.3□□□□□ -1.56
TRIO-221ENST00000513206 MT4P47944 62 aa5.22□□□□□ -1.57
TRIO-221ENST00000513206 KRTAP9-2Q9BYQ4 174 aa5.22□□□□□ -1.57
TRIO-221ENST00000513206 RYR3Q15413 4870 aa5.21□□□□□ -1.58
TRIO-221ENST00000513206 MT1LQ93083 61 aa5.18□□□□□ -1.58
TRIO-221ENST00000513206 HYDINQ4G0P3 5121 aa5.18□□□□□ -1.58
TRIO-221ENST00000513206 LCE3EQ5T5B0 92 aa5.17□□□□□ -1.58
TRIO-221ENST00000513206 MT1EP04732 61 aa5.13□□□□□ -1.59
TRIO-221ENST00000513206 KRTAP4-7Q9BYR0 210 aa5.12□□□□□ -1.59
TRIO-221ENST00000513206 MUC17Q685J3 4493 aa5.08□□□□□ -1.6
TRIO-221ENST00000513206 PRM1P04553 51 aa5.02□□□□□ -1.61
TRIO-221ENST00000513206 KRTAP19-2Q3LHN2 52 aa5.01□□□□□ -1.61
TRIO-221ENST00000513206 KRTAP19-6Q3LI70 58 aa5□□□□□ -1.61
TRIO-221ENST00000513206 MT1MQ8N339 61 aa4.98□□□□□ -1.61
TRIO-221ENST00000513206 MT3P25713 68 aa4.96□□□□□ -1.61
TRIO-221ENST00000513206 LOC100996750A0A140TA64 210 aa4.95□□□□□ -1.62
TRIO-221ENST00000513206 LCE1DQ5T752 114 aa4.9□□□□□ -1.62
TRIO-221ENST00000513206 LCE1BQ5T7P3 118 aa4.9□□□□□ -1.62
TRIO-221ENST00000513206 KRTAP9-6A0A140TA67 174 aa4.89□□□□□ -1.63
TRIO-221ENST00000513206 KRTAP4-3Q9BYR4 195 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms