RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 PCOTHQ58A44 107 aa1.51□□□□□ -2.17
PVT1-202ENST00000512617 UBE2DNLQ8IWF7 75 aa1.51□□□□□ -2.17
PVT1-202ENST00000512617 PKD1P98161 4303 aa1.5□□□□□ -2.17
PVT1-202ENST00000512617 DNAH5Q8TE73 4624 aa1.5□□□□□ -2.17
PVT1-202ENST00000512617 DEFB131BA0A096LNP1 70 aa1.5□□□□□ -2.17
PVT1-202ENST00000512617 K7EMI3 77 aa1.5□□□□□ -2.17
PVT1-202ENST00000512617 SPART-AS1P0CW21 52 aa1.5□□□□□ -2.17
PVT1-202ENST00000512617 PLNP26678 52 aa1.49□□□□□ -2.17
PVT1-202ENST00000512617 H3BNG1 76 aa1.48□□□□□ -2.17
PVT1-202ENST00000512617 A0A096LPF7 62 aa1.47□□□□□ -2.17
PVT1-202ENST00000512617 ETDCA0A1B0GVM5 59 aa1.47□□□□□ -2.17
PVT1-202ENST00000512617 SPINK4O60575 86 aa1.47□□□□□ -2.17
PVT1-202ENST00000512617 DEFB130BP0DP73 79 aa1.47□□□□□ -2.17
PVT1-202ENST00000512617 DEFB130AP0DP74 79 aa1.47□□□□□ -2.17
PVT1-202ENST00000512617 HTN3P15516 51 aa1.47□□□□□ -2.17
PVT1-202ENST00000512617 NOP10Q9NPE3 64 aaKnown RBP1.47□□□□□ -2.17
PVT1-202ENST00000512617 TIMM8BQ9Y5J9 83 aaPredicted RBP1.47□□□□□ -2.17
PVT1-202ENST00000512617 FAT1Q14517 4588 aa1.47□□□□□ -2.17
PVT1-202ENST00000512617 CRIP1P50238 77 aa1.46□□□□□ -2.18
PVT1-202ENST00000512617 KRTAP12-1P59990 96 aa1.46□□□□□ -2.18
PVT1-202ENST00000512617 KCNQ1DNQ9H478 68 aa1.46□□□□□ -2.18
PVT1-202ENST00000512617 HERC1Q15751 4861 aa1.46□□□□□ -2.18
PVT1-202ENST00000512617 UBR4Q5T4S7 5183 aa1.45□□□□□ -2.18
PVT1-202ENST00000512617 DNAH8Q96JB1 4490 aa1.45□□□□□ -2.18
PVT1-202ENST00000512617 ANGP03950 147 aaKnown RBP1.45□□□□□ -2.18
PVT1-202ENST00000512617 HTN1P15515 57 aa1.45□□□□□ -2.18
PVT1-202ENST00000512617 CRIPTQ9P021 101 aa1.45□□□□□ -2.18
PVT1-202ENST00000512617 IGIPA6NJ69 53 aa1.44□□□□□ -2.18
PVT1-202ENST00000512617 I3L3M4 83 aa1.44□□□□□ -2.18
PVT1-202ENST00000512617 KRTAP13-3Q3SY46 172 aa1.44□□□□□ -2.18
PVT1-202ENST00000512617 WFDC10BQ8IUB3 73 aa1.44□□□□□ -2.18
PVT1-202ENST00000512617 PRO0255Q9UI72 69 aa1.44□□□□□ -2.18
PVT1-202ENST00000512617 HMCN2Q8NDA2 5059 aa1.44□□□□□ -2.18
PVT1-202ENST00000512617 MYCBP2O75592 4640 aa1.44□□□□□ -2.18
PVT1-202ENST00000512617 LINC01556Q5JQF7 62 aa1.43□□□□□ -2.18
PVT1-202ENST00000512617 LCE3EQ5T5B0 92 aa1.43□□□□□ -2.18
PVT1-202ENST00000512617 SMIM2Q9BVW6 85 aa1.43□□□□□ -2.18
PVT1-202ENST00000512617 FAT3Q8TDW7 4589 aa1.42□□□□□ -2.18
PVT1-202ENST00000512617 KRTAP10-4P60372 401 aaPredicted RBP1.42□□□□□ -2.18
PVT1-202ENST00000512617 LELP1Q5T871 98 aa1.42□□□□□ -2.18
PVT1-202ENST00000512617 KRTAP5-11Q6L8G4 156 aa1.42□□□□□ -2.18
PVT1-202ENST00000512617 KRTAP5-4Q6L8H1 288 aa1.42□□□□□ -2.18
PVT1-202ENST00000512617 Q6ZSA8 131 aa1.42□□□□□ -2.18
PVT1-202ENST00000512617 POLR2KP53803 58 aaKnown RBP1.41□□□□□ -2.18
PVT1-202ENST00000512617 TP53AIP1Q9HCN2 124 aa1.41□□□□□ -2.18
PVT1-202ENST00000512617 VPS13BQ7Z7G8 4022 aa1.41□□□□□ -2.18
PVT1-202ENST00000512617 H0YGX0 51 aa1.4□□□□□ -2.19
PVT1-202ENST00000512617 KRTAP10-10P60014 251 aa1.4□□□□□ -2.19
PVT1-202ENST00000512617 LCE1EQ5T753 118 aa1.4□□□□□ -2.19
PVT1-202ENST00000512617 Q5VSD8 79 aa1.4□□□□□ -2.19
PVT1-202ENST00000512617 PKHD1L1Q86WI1 4243 aa1.4□□□□□ -2.19
PVT1-202ENST00000512617 LRP1Q07954 4544 aaKnown RBP1.39□□□□□ -2.19
PVT1-202ENST00000512617 NDUFA1O15239 70 aa1.39□□□□□ -2.19
PVT1-202ENST00000512617 KRTAP10-7P60409 375 aaPredicted RBP1.39□□□□□ -2.19
PVT1-202ENST00000512617 KRTAP5-1Q6L8H4 278 aa1.39□□□□□ -2.19
PVT1-202ENST00000512617 KRTAP4-4Q9BYR3 166 aa1.39□□□□□ -2.19
PVT1-202ENST00000512617 M0QY20 66 aa1.38□□□□□ -2.19
PVT1-202ENST00000512617 SMR3BP02814 79 aaPredicted RBP1.38□□□□□ -2.19
PVT1-202ENST00000512617 MRPL34Q9BQ48 92 aaKnown RBP1.38□□□□□ -2.19
PVT1-202ENST00000512617 K7EQZ3 153 aa1.37□□□□□ -2.19
PVT1-202ENST00000512617 MT1HL1P0DM35 61 aa1.37□□□□□ -2.19
PVT1-202ENST00000512617 TNXBP22105 4242 aa1.36□□□□□ -2.19
PVT1-202ENST00000512617 LINC00308Q8TCZ7 52 aa1.36□□□□□ -2.19
PVT1-202ENST00000512617 DEFB104AQ8WTQ1 72 aa1.36□□□□□ -2.19
PVT1-202ENST00000512617 RPL39LQ96EH5 51 aaKnown RBP1.36□□□□□ -2.19
PVT1-202ENST00000512617 CDKN2A-AS1Q9UH64 79 aa1.36□□□□□ -2.19
PVT1-202ENST00000512617 FLG2Q5D862 2391 aaPredicted RBP1.36□□□□□ -2.19
PVT1-202ENST00000512617 RPL39P62891 51 aaKnown RBP1.35□□□□□ -2.19
PVT1-202ENST00000512617 KRTAP6-3Q3LI67 103 aa1.35□□□□□ -2.19
PVT1-202ENST00000512617 CLPSL2Q6UWE3 100 aa1.35□□□□□ -2.19
PVT1-202ENST00000512617 COX6B2Q6YFQ2 88 aa1.35□□□□□ -2.19
PVT1-202ENST00000512617 DMBT1Q9UGM3 2413 aaPredicted RBP1.34□□□□□ -2.19
PVT1-202ENST00000512617 LINC00158P58513 81 aa1.34□□□□□ -2.19
PVT1-202ENST00000512617 KRTAP13-1Q8IUC0 172 aa1.34□□□□□ -2.19
PVT1-202ENST00000512617 Q8IZM0 81 aa1.34□□□□□ -2.19
PVT1-202ENST00000512617 LRP2P98164 4655 aa1.34□□□□□ -2.2
PVT1-202ENST00000512617 SRRM2Q9UQ35 2752 aaKnown RBP1.34□□□□□ -2.2
PVT1-202ENST00000512617 A0A096LNI7 61 aa1.33□□□□□ -2.2
PVT1-202ENST00000512617 COX6A2Q02221 97 aa1.33□□□□□ -2.2
PVT1-202ENST00000512617 RNF213Q63HN8 5207 aa1.33□□□□□ -2.2
PVT1-202ENST00000512617 KRTAP10-5P60370 271 aa1.32□□□□□ -2.2
PVT1-202ENST00000512617 LCE3DQ9BYE3 92 aa1.32□□□□□ -2.2
PVT1-202ENST00000512617 KRTAP5-2Q701N4 177 aa1.31□□□□□ -2.2
PVT1-202ENST00000512617 KRTAP12-4P60329 112 aa1.3□□□□□ -2.2
PVT1-202ENST00000512617 SPINK6Q6UWN8 80 aa1.3□□□□□ -2.2
PVT1-202ENST00000512617 C10orf95Q9H7T3 257 aa1.3□□□□□ -2.2
PVT1-202ENST00000512617 C6orf48Q9UBA6 75 aa1.3□□□□□ -2.2
PVT1-202ENST00000512617 LPAP08519 4548 aa1.3□□□□□ -2.2
PVT1-202ENST00000512617 MUC2Q02817 5179 aa1.3□□□□□ -2.2
PVT1-202ENST00000512617 FAT4Q6V0I7 4981 aa1.28□□□□□ -2.21
PVT1-202ENST00000512617 IGLV5-48A0A075B6I7 105 aa1.27□□□□□ -2.21
PVT1-202ENST00000512617 MUC17Q685J3 4493 aa1.26□□□□□ -2.21
PVT1-202ENST00000512617 H0YAA0 97 aa1.25□□□□□ -2.21
PVT1-202ENST00000512617 SPRR1AP35321 89 aa1.25□□□□□ -2.21
PVT1-202ENST00000512617 TOMM7Q9P0U1 55 aa1.25□□□□□ -2.21
PVT1-202ENST00000512617 A0A0D9SG42 100 aa1.24□□□□□ -2.21
PVT1-202ENST00000512617 H1FX-AS1Q4G0G2 97 aa1.24□□□□□ -2.21
PVT1-202ENST00000512617 DEFB105AQ8NG35 78 aa1.24□□□□□ -2.21
PVT1-202ENST00000512617 PRLHP81277 87 aa1.23□□□□□ -2.21
PVT1-202ENST00000512617 WFDC13Q8IUB5 93 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms