RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 MGAM2Q2M2H8 2515 aa2.54□□□□□ -2
HMGB3P13-201ENST00000511263 H0YAA0 97 aa2.53□□□□□ -2
HMGB3P13-201ENST00000511263 SPRR1BP22528 89 aa2.53□□□□□ -2
HMGB3P13-201ENST00000511263 ANK2Q01484 3957 aa2.52□□□□□ -2.01
HMGB3P13-201ENST00000511263 UBE2DNLQ8IWF7 75 aa2.51□□□□□ -2.01
HMGB3P13-201ENST00000511263 VWFP04275 2813 aa2.51□□□□□ -2.01
HMGB3P13-201ENST00000511263 H1FX-AS1Q4G0G2 97 aa2.5□□□□□ -2.01
HMGB3P13-201ENST00000511263 PRO2289Q9P1D8 64 aa2.5□□□□□ -2.01
HMGB3P13-201ENST00000511263 PKD1L1Q8TDX9 2849 aa2.49□□□□□ -2.01
HMGB3P13-201ENST00000511263 DNAH3Q8TD57 4116 aa2.49□□□□□ -2.01
HMGB3P13-201ENST00000511263 NBEAL2Q6ZNJ1 2754 aa2.48□□□□□ -2.01
HMGB3P13-201ENST00000511263 Q6ZSA8 131 aa2.48□□□□□ -2.01
HMGB3P13-201ENST00000511263 NBEAL1Q6ZS30 2694 aa2.48□□□□□ -2.01
HMGB3P13-201ENST00000511263 CMYA5Q8N3K9 4069 aa2.47□□□□□ -2.01
HMGB3P13-201ENST00000511263 NOTCH1P46531 2555 aa2.47□□□□□ -2.01
HMGB3P13-201ENST00000511263 RPL37P61927 97 aaKnown RBP2.47□□□□□ -2.01
HMGB3P13-201ENST00000511263 ALMS1Q8TCU4 4167 aa2.46□□□□□ -2.02
HMGB3P13-201ENST00000511263 PLAC4Q8WY50 150 aa2.46□□□□□ -2.02
HMGB3P13-201ENST00000511263 TPRXLQ17RH7 258 aa2.45□□□□□ -2.02
HMGB3P13-201ENST00000511263 Q6ZRN7 208 aaPredicted RBP2.44□□□□□ -2.02
HMGB3P13-201ENST00000511263 PP632Q6XCG6 107 aa2.42□□□□□ -2.02
HMGB3P13-201ENST00000511263 INE1O15225 51 aa2.41□□□□□ -2.02
HMGB3P13-201ENST00000511263 PRLHP81277 87 aa2.41□□□□□ -2.02
HMGB3P13-201ENST00000511263 DNHD1Q96M86 4753 aa2.41□□□□□ -2.02
HMGB3P13-201ENST00000511263 HUWE1Q7Z6Z7 4374 aaKnown RBP2.4□□□□□ -2.03
HMGB3P13-201ENST00000511263 DNAH9Q9NYC9 4486 aa2.4□□□□□ -2.03
HMGB3P13-201ENST00000511263 MEGF8Q7Z7M0 2845 aa2.38□□□□□ -2.03
HMGB3P13-201ENST00000511263 SPINK1P00995 79 aa2.38□□□□□ -2.03
HMGB3P13-201ENST00000511263 R4GN34 69 aa2.38□□□□□ -2.03
HMGB3P13-201ENST00000511263 FBN3Q75N90 2809 aa2.37□□□□□ -2.03
HMGB3P13-201ENST00000511263 STAB2Q8WWQ8 2551 aa2.37□□□□□ -2.03
HMGB3P13-201ENST00000511263 TENM3Q9P273 2699 aa2.36□□□□□ -2.03
HMGB3P13-201ENST00000511263 SPACA4Q8TDM5 124 aa2.36□□□□□ -2.03
HMGB3P13-201ENST00000511263 DYNC2H1Q8NCM8 4307 aaKnown RBP2.36□□□□□ -2.03
HMGB3P13-201ENST00000511263 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
HMGB3P13-201ENST00000511263 DNAH7Q8WXX0 4024 aa2.34□□□□□ -2.03
HMGB3P13-201ENST00000511263 A0A096LNI7 61 aa2.34□□□□□ -2.03
HMGB3P13-201ENST00000511263 SPRR5A0A1B0GTR4 108 aa2.34□□□□□ -2.03
HMGB3P13-201ENST00000511263 C10orf95Q9H7T3 257 aa2.34□□□□□ -2.03
HMGB3P13-201ENST00000511263 COL7A1Q02388 2944 aa2.34□□□□□ -2.04
HMGB3P13-201ENST00000511263 PRKDCP78527 4128 aaKnown RBP2.33□□□□□ -2.04
HMGB3P13-201ENST00000511263 CSMD3Q7Z407 3707 aa2.32□□□□□ -2.04
HMGB3P13-201ENST00000511263 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
HMGB3P13-201ENST00000511263 SPINK6Q6UWN8 80 aa2.31□□□□□ -2.04
HMGB3P13-201ENST00000511263 PLECQ15149 4684 aaKnown RBP2.31□□□□□ -2.04
HMGB3P13-201ENST00000511263 KRTAP10-10P60014 251 aa2.3□□□□□ -2.04
HMGB3P13-201ENST00000511263 FLG2Q5D862 2391 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P13-201ENST00000511263 TGP01266 2768 aa2.29□□□□□ -2.04
HMGB3P13-201ENST00000511263 TENM2Q9NT68 2774 aa2.29□□□□□ -2.04
HMGB3P13-201ENST00000511263 KMT2AQ03164 3969 aa2.29□□□□□ -2.04
HMGB3P13-201ENST00000511263 KRTAP13-1Q8IUC0 172 aa2.29□□□□□ -2.04
HMGB3P13-201ENST00000511263 S4R3F8 94 aa2.29□□□□□ -2.04
HMGB3P13-201ENST00000511263 STARD9Q9P2P6 4700 aa2.28□□□□□ -2.04
HMGB3P13-201ENST00000511263 VPS13DQ5THJ4 4388 aa2.27□□□□□ -2.05
HMGB3P13-201ENST00000511263 LYSTQ99698 3801 aa2.25□□□□□ -2.05
HMGB3P13-201ENST00000511263 DNAH6Q9C0G6 4158 aa2.25□□□□□ -2.05
HMGB3P13-201ENST00000511263 RPS29P62273 56 aaKnown RBP2.25□□□□□ -2.05
HMGB3P13-201ENST00000511263 DNAH1Q9P2D7 4330 aa2.25□□□□□ -2.05
HMGB3P13-201ENST00000511263 DNAH17Q9UFH2 4485 aa2.23□□□□□ -2.05
HMGB3P13-201ENST00000511263 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
HMGB3P13-201ENST00000511263 A0A0D9SG42 100 aa2.22□□□□□ -2.05
HMGB3P13-201ENST00000511263 DNAH2Q9P225 4427 aa2.21□□□□□ -2.06
HMGB3P13-201ENST00000511263 SMR3BP02814 79 aaPredicted RBP2.21□□□□□ -2.06
HMGB3P13-201ENST00000511263 KRTAP10-4P60372 401 aaPredicted RBP2.21□□□□□ -2.06
HMGB3P13-201ENST00000511263 HECTD4Q9Y4D8 3996 aa2.2□□□□□ -2.06
HMGB3P13-201ENST00000511263 Q5VSD8 79 aa2.19□□□□□ -2.06
HMGB3P13-201ENST00000511263 M0QZ58 72 aa2.18□□□□□ -2.06
HMGB3P13-201ENST00000511263 HYDINQ4G0P3 5121 aa2.17□□□□□ -2.06
HMGB3P13-201ENST00000511263 DNAH8Q96JB1 4490 aa2.17□□□□□ -2.06
HMGB3P13-201ENST00000511263 DNAH5Q8TE73 4624 aa2.17□□□□□ -2.06
HMGB3P13-201ENST00000511263 DNAH10Q8IVF4 4471 aa2.17□□□□□ -2.06
HMGB3P13-201ENST00000511263 SACSQ9NZJ4 4579 aa2.17□□□□□ -2.06
HMGB3P13-201ENST00000511263 KMT2CQ8NEZ4 4911 aaKnown RBP2.17□□□□□ -2.06
HMGB3P13-201ENST00000511263 FAT2Q9NYQ8 4349 aa2.17□□□□□ -2.06
HMGB3P13-201ENST00000511263 PKD1P98161 4303 aa2.16□□□□□ -2.06
HMGB3P13-201ENST00000511263 RYR2Q92736 4967 aa2.16□□□□□ -2.06
HMGB3P13-201ENST00000511263 FRAS1Q86XX4 4008 aa2.16□□□□□ -2.06
HMGB3P13-201ENST00000511263 KRTAP12-1P59990 96 aa2.16□□□□□ -2.06
HMGB3P13-201ENST00000511263 KRTAP13-2Q52LG2 175 aa2.16□□□□□ -2.06
HMGB3P13-201ENST00000511263 DNAH11Q96DT5 4516 aa2.15□□□□□ -2.07
HMGB3P13-201ENST00000511263 KRTAP13-4Q3LI77 160 aa2.14□□□□□ -2.07
HMGB3P13-201ENST00000511263 LRP1BQ9NZR2 4599 aa2.13□□□□□ -2.07
HMGB3P13-201ENST00000511263 VPS13BQ7Z7G8 4022 aa2.12□□□□□ -2.07
HMGB3P13-201ENST00000511263 DYNC1H1Q14204 4646 aaKnown RBP2.12□□□□□ -2.07
HMGB3P13-201ENST00000511263 MT1HL1P0DM35 61 aa2.11□□□□□ -2.07
HMGB3P13-201ENST00000511263 RYR3Q15413 4870 aa2.1□□□□□ -2.07
HMGB3P13-201ENST00000511263 RYR1P21817 5038 aa2.08□□□□□ -2.08
HMGB3P13-201ENST00000511263 APOBP04114 4563 aaKnown RBP2.07□□□□□ -2.08
HMGB3P13-201ENST00000511263 PKHD1P08F94 4074 aa2.06□□□□□ -2.08
HMGB3P13-201ENST00000511263 SRRM2Q9UQ35 2752 aaKnown RBP2.05□□□□□ -2.08
HMGB3P13-201ENST00000511263 DMBT1Q9UGM3 2413 aaPredicted RBP2.05□□□□□ -2.08
HMGB3P13-201ENST00000511263 BIRC6Q9NR09 4857 aa2.04□□□□□ -2.08
HMGB3P13-201ENST00000511263 HSPG2P98160 4391 aa2.03□□□□□ -2.08
HMGB3P13-201ENST00000511263 FAT1Q14517 4588 aa2.03□□□□□ -2.08
HMGB3P13-201ENST00000511263 EPPK1P58107 5090 aaKnown RBP2.02□□□□□ -2.09
HMGB3P13-201ENST00000511263 KIAA1109Q2LD37 5005 aa2.02□□□□□ -2.09
HMGB3P13-201ENST00000511263 HERC2O95714 4834 aa1.99□□□□□ -2.09
HMGB3P13-201ENST00000511263 PKHD1L1Q86WI1 4243 aa1.99□□□□□ -2.09
HMGB3P13-201ENST00000511263 TNXBP22105 4242 aa1.98□□□□□ -2.09
HMGB3P13-201ENST00000511263 C9orf92A6NGG3 77 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms