RNA–Protein interactions for RNA: ENST00000508800.1

NEDD9-212, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-212ENST00000508800 PDE6GP18545 87 aa4.49□□□□□ -1.69
NEDD9-212ENST00000508800 CXCL6P80162 114 aa4.49□□□□□ -1.69
NEDD9-212ENST00000508800 CEND1Q8N111 149 aa4.49□□□□□ -1.69
NEDD9-212ENST00000508800 NREPQ16612 68 aa4.48□□□□□ -1.69
NEDD9-212ENST00000508800 KRTAP10-12P60413 245 aa4.47□□□□□ -1.69
NEDD9-212ENST00000508800 PAM16Q9Y3D7 125 aa4.47□□□□□ -1.69
NEDD9-212ENST00000508800 LOC110117498A0A087WWA1 95 aa4.46□□□□□ -1.7
NEDD9-212ENST00000508800 HCG22E2RYF7 251 aa4.44□□□□□ -1.7
NEDD9-212ENST00000508800 JMJD7-PLA2G4BH0Y9G9 81 aa4.44□□□□□ -1.7
NEDD9-212ENST00000508800 KRTAP5-7Q6L8G8 165 aa4.44□□□□□ -1.7
NEDD9-212ENST00000508800 HIST1H2BLQ99880 126 aa4.44□□□□□ -1.7
NEDD9-212ENST00000508800 S100A1P23297 94 aa4.43□□□□□ -1.7
NEDD9-212ENST00000508800 FXYD2P54710 66 aa4.43□□□□□ -1.7
NEDD9-212ENST00000508800 KRTAP10-7P60409 375 aaPredicted RBP4.43□□□□□ -1.7
NEDD9-212ENST00000508800 BAALC-AS2P0C853 105 aa4.42□□□□□ -1.7
NEDD9-212ENST00000508800 S100A2P29034 98 aa4.42□□□□□ -1.7
NEDD9-212ENST00000508800 CASC2Q6XLA1 102 aa4.41□□□□□ -1.7
NEDD9-212ENST00000508800 C14orf144Q96I85 54 aa4.41□□□□□ -1.7
NEDD9-212ENST00000508800 MT4P47944 62 aa4.38□□□□□ -1.71
NEDD9-212ENST00000508800 NDUFC1O43677 76 aa4.35□□□□□ -1.71
NEDD9-212ENST00000508800 SCGB1C2P0DMR2 95 aa4.35□□□□□ -1.71
NEDD9-212ENST00000508800 ADM2Q7Z4H4 148 aa4.35□□□□□ -1.71
NEDD9-212ENST00000508800 K7ERJ3 54 aa4.34□□□□□ -1.71
NEDD9-212ENST00000508800 BPY2O14599 106 aa4.34□□□□□ -1.71
NEDD9-212ENST00000508800 R4GN34 69 aa4.34□□□□□ -1.71
NEDD9-212ENST00000508800 C14orf132Q9NPU4 83 aa4.33□□□□□ -1.72
NEDD9-212ENST00000508800 SPATA45Q537H7 98 aa4.32□□□□□ -1.72
NEDD9-212ENST00000508800 VAMP8Q9BV40 100 aa4.32□□□□□ -1.72
NEDD9-212ENST00000508800 A0A087WVE0 104 aa4.3□□□□□ -1.72
NEDD9-212ENST00000508800 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
NEDD9-212ENST00000508800 KRTAP19-3Q7Z4W3 81 aa4.3□□□□□ -1.72
NEDD9-212ENST00000508800 HSD52Q0P140 79 aa4.29□□□□□ -1.72
NEDD9-212ENST00000508800 ATXN8Q156A1 80 aa4.29□□□□□ -1.72
NEDD9-212ENST00000508800 NAA38Q9BRA0 125 aaKnown RBP4.29□□□□□ -1.72
NEDD9-212ENST00000508800 SPRR5A0A1B0GTR4 108 aa4.27□□□□□ -1.73
NEDD9-212ENST00000508800 LOC105371267A0A1B0GV96 52 aa4.27□□□□□ -1.73
NEDD9-212ENST00000508800 C20orf197Q8N268 126 aa4.27□□□□□ -1.73
NEDD9-212ENST00000508800 Q8N9L7 120 aa4.27□□□□□ -1.73
NEDD9-212ENST00000508800 CYSTM1Q9H1C7 97 aa4.26□□□□□ -1.73
NEDD9-212ENST00000508800 M0QZ58 72 aa4.25□□□□□ -1.73
NEDD9-212ENST00000508800 TP53AIP1Q9HCN2 124 aa4.25□□□□□ -1.73
NEDD9-212ENST00000508800 S100A6P06703 90 aa4.24□□□□□ -1.73
NEDD9-212ENST00000508800 KRTAP5-4Q6L8H1 288 aa4.21□□□□□ -1.74
NEDD9-212ENST00000508800 CYP4F30PQ9H0H9 118 aa4.21□□□□□ -1.74
NEDD9-212ENST00000508800 MT1EP04732 61 aa4.2□□□□□ -1.74
NEDD9-212ENST00000508800 LINC01554Q52M75 96 aa4.2□□□□□ -1.74
NEDD9-212ENST00000508800 KRTAP19-7Q3SYF9 63 aa4.18□□□□□ -1.74
NEDD9-212ENST00000508800 PP632Q6XCG6 107 aa4.16□□□□□ -1.74
NEDD9-212ENST00000508800 P0C880 135 aa4.15□□□□□ -1.75
NEDD9-212ENST00000508800 MT1GP13640 62 aa4.15□□□□□ -1.75
NEDD9-212ENST00000508800 ACYP1P07311 99 aa4.14□□□□□ -1.75
NEDD9-212ENST00000508800 LOC101927531A0A1B0GV80 90 aa4.13□□□□□ -1.75
NEDD9-212ENST00000508800 PCP4L1A6NKN8 68 aa4.12□□□□□ -1.75
NEDD9-212ENST00000508800 TRAV22A0A0B4J277 110 aa4.11□□□□□ -1.75
NEDD9-212ENST00000508800 K7EP34 96 aa4.1□□□□□ -1.75
NEDD9-212ENST00000508800 BATFQ16520 125 aa4.08□□□□□ -1.76
NEDD9-212ENST00000508800 AHNAKQ09666 5890 aaKnown RBP4.07□□□□□ -1.76
NEDD9-212ENST00000508800 UBL5Q9BZL1 73 aa4.04□□□□□ -1.76
NEDD9-212ENST00000508800 H3BT86 120 aa4.03□□□□□ -1.76
NEDD9-212ENST00000508800 MT-ATP8P03928 68 aa4.03□□□□□ -1.76
NEDD9-212ENST00000508800 MT1MQ8N339 61 aa4.03□□□□□ -1.76
NEDD9-212ENST00000508800 UQCR10Q9UDW1 63 aa4.03□□□□□ -1.76
NEDD9-212ENST00000508800 TSTD3H0UI37 97 aa4.02□□□□□ -1.77
NEDD9-212ENST00000508800 SMIM6P0DI80 62 aa4.02□□□□□ -1.77
NEDD9-212ENST00000508800 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
NEDD9-212ENST00000508800 ATOX1O00244 68 aa3.96□□□□□ -1.78
NEDD9-212ENST00000508800 PCP4P48539 62 aa3.96□□□□□ -1.78
NEDD9-212ENST00000508800 A0A1W2PPM0 123 aa3.94□□□□□ -1.78
NEDD9-212ENST00000508800 MUC5ACP98088 5654 aa3.93□□□□□ -1.78
NEDD9-212ENST00000508800 M0R143 59 aa3.93□□□□□ -1.78
NEDD9-212ENST00000508800 KRTAP19-5Q3LI72 72 aa3.92□□□□□ -1.78
NEDD9-212ENST00000508800 SPCS1Q9Y6A9 102 aa3.92□□□□□ -1.78
NEDD9-212ENST00000508800 MT1LQ93083 61 aa3.91□□□□□ -1.78
NEDD9-212ENST00000508800 A0A1B0GV90 55 aa3.9□□□□□ -1.79
NEDD9-212ENST00000508800 PYY3Q5JQD4 70 aa3.9□□□□□ -1.79
NEDD9-212ENST00000508800 CAMK2N1Q7Z7J9 78 aa3.9□□□□□ -1.79
NEDD9-212ENST00000508800 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
NEDD9-212ENST00000508800 H0Y9P7 68 aa3.88□□□□□ -1.79
NEDD9-212ENST00000508800 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
NEDD9-212ENST00000508800 UQCRQO14949 82 aa3.87□□□□□ -1.79
NEDD9-212ENST00000508800 KRTAP12-4P60329 112 aa3.86□□□□□ -1.79
NEDD9-212ENST00000508800 A0A0D9SG42 100 aa3.84□□□□□ -1.79
NEDD9-212ENST00000508800 TAX1BP3O14907 124 aa3.82□□□□□ -1.8
NEDD9-212ENST00000508800 DMAC1Q96GE9 116 aa3.77□□□□□ -1.81
NEDD9-212ENST00000508800 KRTAP5-5Q701N2 237 aaPredicted RBP3.76□□□□□ -1.81
NEDD9-212ENST00000508800 LINC00208Q96KT6 92 aa3.76□□□□□ -1.81
NEDD9-212ENST00000508800 SYNE1Q8NF91 8797 aaKnown RBP3.74□□□□□ -1.81
NEDD9-212ENST00000508800 COL5A1-AS1Q5SY13 56 aa3.73□□□□□ -1.81
NEDD9-212ENST00000508800 A0A0A0MQY5 61 aa3.71□□□□□ -1.82
NEDD9-212ENST00000508800 TRAV7A0A075B6U4 112 aa3.7□□□□□ -1.82
NEDD9-212ENST00000508800 MP68P56378 58 aa3.7□□□□□ -1.82
NEDD9-212ENST00000508800 SPTSSBQ8NFR3 76 aa3.7□□□□□ -1.82
NEDD9-212ENST00000508800 KRTAP5-8O75690 187 aa3.69□□□□□ -1.82
NEDD9-212ENST00000508800 K7ERU9 68 aa3.68□□□□□ -1.82
NEDD9-212ENST00000508800 SCGB1A1P11684 91 aa3.65□□□□□ -1.83
NEDD9-212ENST00000508800 C10orf95Q9H7T3 257 aa3.64□□□□□ -1.83
NEDD9-212ENST00000508800 KRTAP13-4Q3LI77 160 aa3.62□□□□□ -1.83
NEDD9-212ENST00000508800 HIST1H4AP62805 103 aaKnown RBP3.61□□□□□ -1.83
NEDD9-212ENST00000508800 ATP5EP2Q5VTU8 51 aa3.61□□□□□ -1.83
NEDD9-212ENST00000508800 H3BPC8 53 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms