RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 DMAC1Q96GE9 116 aa2.73□□□□□ -1.97
PDLIM5-211ENST00000508531 K7ERS5 55 aa2.72□□□□□ -1.97
PDLIM5-211ENST00000508531 KMT2AQ03164 3969 aa2.72□□□□□ -1.97
PDLIM5-211ENST00000508531 C15orf56Q8N910 161 aa2.72□□□□□ -1.97
PDLIM5-211ENST00000508531 MRPL34Q9BQ48 92 aaKnown RBP2.72□□□□□ -1.97
PDLIM5-211ENST00000508531 PLECQ15149 4684 aaKnown RBP2.72□□□□□ -1.97
PDLIM5-211ENST00000508531 DEFB116Q30KQ4 102 aa2.71□□□□□ -1.98
PDLIM5-211ENST00000508531 KRTAP25-1Q3LHN0 102 aa2.71□□□□□ -1.98
PDLIM5-211ENST00000508531 C8orf17Q9NRJ1 99 aa2.71□□□□□ -1.98
PDLIM5-211ENST00000508531 A0A096LPF7 62 aa2.7□□□□□ -1.98
PDLIM5-211ENST00000508531 LY6G6CO95867 125 aa2.7□□□□□ -1.98
PDLIM5-211ENST00000508531 A0A1B0GVX0 72 aa2.69□□□□□ -1.98
PDLIM5-211ENST00000508531 ZNF861PO60384 105 aa2.69□□□□□ -1.98
PDLIM5-211ENST00000508531 LINC01556Q5JQF7 62 aa2.69□□□□□ -1.98
PDLIM5-211ENST00000508531 ADM2Q7Z4H4 148 aa2.69□□□□□ -1.98
PDLIM5-211ENST00000508531 ALMS1Q8TCU4 4167 aa2.68□□□□□ -1.98
PDLIM5-211ENST00000508531 DNAH10Q8IVF4 4471 aa2.68□□□□□ -1.98
PDLIM5-211ENST00000508531 IGLV7-43P04211 117 aa2.68□□□□□ -1.98
PDLIM5-211ENST00000508531 KRTAP26-1Q6PEX3 210 aa2.68□□□□□ -1.98
PDLIM5-211ENST00000508531 FAM168BA1KXE4 195 aa2.65□□□□□ -1.99
PDLIM5-211ENST00000508531 NUPR2A6NF83 97 aa2.64□□□□□ -1.99
PDLIM5-211ENST00000508531 A8MUU9 505 aa2.64□□□□□ -1.99
PDLIM5-211ENST00000508531 LINC00483Q53H64 154 aa2.64□□□□□ -1.99
PDLIM5-211ENST00000508531 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
PDLIM5-211ENST00000508531 CHTF8P0CG12 524 aa2.62□□□□□ -1.99
PDLIM5-211ENST00000508531 HTN3P15516 51 aa2.62□□□□□ -1.99
PDLIM5-211ENST00000508531 DEFB135Q30KP9 77 aa2.62□□□□□ -1.99
PDLIM5-211ENST00000508531 PKHD1P08F94 4074 aa2.62□□□□□ -1.99
PDLIM5-211ENST00000508531 PRLHP81277 87 aa2.61□□□□□ -1.99
PDLIM5-211ENST00000508531 Q96NJ1 140 aa2.61□□□□□ -1.99
PDLIM5-211ENST00000508531 HSPG2P98160 4391 aa2.6□□□□□ -1.99
PDLIM5-211ENST00000508531 PP632Q6XCG6 107 aa2.6□□□□□ -1.99
PDLIM5-211ENST00000508531 DMBT1Q9UGM3 2413 aaPredicted RBP2.59□□□□□ -1.99
PDLIM5-211ENST00000508531 DYNC1H1Q14204 4646 aaKnown RBP2.59□□□□□ -1.99
PDLIM5-211ENST00000508531 SRRM2Q9UQ35 2752 aaKnown RBP2.58□□□□□ -2
PDLIM5-211ENST00000508531 VPS13DQ5THJ4 4388 aa2.58□□□□□ -2
PDLIM5-211ENST00000508531 Q5W150 140 aa2.58□□□□□ -2
PDLIM5-211ENST00000508531 SPINT4Q6UDR6 99 aa2.58□□□□□ -2
PDLIM5-211ENST00000508531 COX6B2Q6YFQ2 88 aa2.58□□□□□ -2
PDLIM5-211ENST00000508531 LINC00304Q8N9R0 145 aa2.58□□□□□ -2
PDLIM5-211ENST00000508531 C20orf166-AS1Q96NR2 134 aa2.58□□□□□ -2
PDLIM5-211ENST00000508531 DNAH2Q9P225 4427 aa2.57□□□□□ -2
PDLIM5-211ENST00000508531 DNAH11Q96DT5 4516 aa2.56□□□□□ -2
PDLIM5-211ENST00000508531 PANO1I0J062 215 aa2.56□□□□□ -2
PDLIM5-211ENST00000508531 KRTAP5-8O75690 187 aa2.56□□□□□ -2
PDLIM5-211ENST00000508531 RNF213Q63HN8 5207 aa2.56□□□□□ -2
PDLIM5-211ENST00000508531 FAT2Q9NYQ8 4349 aa2.56□□□□□ -2
PDLIM5-211ENST00000508531 A0A0G2JQZ4 141 aa2.55□□□□□ -2
PDLIM5-211ENST00000508531 A0A1B0GU33 70 aa2.55□□□□□ -2
PDLIM5-211ENST00000508531 A0A1W2PNN7 141 aa2.55□□□□□ -2
PDLIM5-211ENST00000508531 DEFB4AO15263 64 aa2.55□□□□□ -2
PDLIM5-211ENST00000508531 DNAH17Q9UFH2 4485 aa2.54□□□□□ -2
PDLIM5-211ENST00000508531 A0A096LNI7 61 aa2.54□□□□□ -2
PDLIM5-211ENST00000508531 P0C880 135 aa2.54□□□□□ -2
PDLIM5-211ENST00000508531 SSBP3-AS1Q7Z2R9 100 aa2.54□□□□□ -2
PDLIM5-211ENST00000508531 FLG2Q5D862 2391 aaPredicted RBP2.53□□□□□ -2
PDLIM5-211ENST00000508531 PKD1P98161 4303 aa2.53□□□□□ -2
PDLIM5-211ENST00000508531 APOBP04114 4563 aaKnown RBP2.53□□□□□ -2
PDLIM5-211ENST00000508531 LUZP6Q538Z0 58 aa2.53□□□□□ -2
PDLIM5-211ENST00000508531 KRTAP13-1Q8IUC0 172 aa2.53□□□□□ -2
PDLIM5-211ENST00000508531 DNAH6Q9C0G6 4158 aa2.52□□□□□ -2.01
PDLIM5-211ENST00000508531 H1FX-AS1Q4G0G2 97 aa2.52□□□□□ -2.01
PDLIM5-211ENST00000508531 MYCBP2O75592 4640 aa2.51□□□□□ -2.01
PDLIM5-211ENST00000508531 LRP1BQ9NZR2 4599 aa2.51□□□□□ -2.01
PDLIM5-211ENST00000508531 A0A087WTM6 91 aa2.51□□□□□ -2.01
PDLIM5-211ENST00000508531 H0YAA0 97 aa2.51□□□□□ -2.01
PDLIM5-211ENST00000508531 CRIPTQ9P021 101 aa2.51□□□□□ -2.01
PDLIM5-211ENST00000508531 Q6ZSA8 131 aa2.5□□□□□ -2.01
PDLIM5-211ENST00000508531 PSORS1C2Q9UIG4 136 aa2.5□□□□□ -2.01
PDLIM5-211ENST00000508531 DNAH5Q8TE73 4624 aa2.49□□□□□ -2.01
PDLIM5-211ENST00000508531 HMCN2Q8NDA2 5059 aa2.49□□□□□ -2.01
PDLIM5-211ENST00000508531 RPL37P61927 97 aaKnown RBP2.48□□□□□ -2.01
PDLIM5-211ENST00000508531 SPINK6Q6UWN8 80 aa2.48□□□□□ -2.01
PDLIM5-211ENST00000508531 VPS13BQ7Z7G8 4022 aa2.46□□□□□ -2.01
PDLIM5-211ENST00000508531 CAMK2N1Q7Z7J9 78 aa2.46□□□□□ -2.02
PDLIM5-211ENST00000508531 Q5VSD8 79 aa2.45□□□□□ -2.02
PDLIM5-211ENST00000508531 APLNQ9ULZ1 77 aa2.45□□□□□ -2.02
PDLIM5-211ENST00000508531 FAT1Q14517 4588 aa2.45□□□□□ -2.02
PDLIM5-211ENST00000508531 SPINK1P00995 79 aa2.44□□□□□ -2.02
PDLIM5-211ENST00000508531 SMR3BP02814 79 aaPredicted RBP2.44□□□□□ -2.02
PDLIM5-211ENST00000508531 NBDYA0A0U1RRE5 68 aa2.43□□□□□ -2.02
PDLIM5-211ENST00000508531 SPACA4Q8TDM5 124 aa2.43□□□□□ -2.02
PDLIM5-211ENST00000508531 UBE2DNLQ8IWF7 75 aa2.42□□□□□ -2.02
PDLIM5-211ENST00000508531 CIRBP-AS1Q8TBR5 109 aa2.42□□□□□ -2.02
PDLIM5-211ENST00000508531 RPS29P62273 56 aaKnown RBP2.4□□□□□ -2.03
PDLIM5-211ENST00000508531 MUC2Q02817 5179 aa2.39□□□□□ -2.03
PDLIM5-211ENST00000508531 LRP2P98164 4655 aa2.39□□□□□ -2.03
PDLIM5-211ENST00000508531 LRP1Q07954 4544 aaKnown RBP2.38□□□□□ -2.03
PDLIM5-211ENST00000508531 TPRXLQ17RH7 258 aa2.37□□□□□ -2.03
PDLIM5-211ENST00000508531 FAT4Q6V0I7 4981 aa2.36□□□□□ -2.03
PDLIM5-211ENST00000508531 PLAC4Q8WY50 150 aa2.35□□□□□ -2.03
PDLIM5-211ENST00000508531 PKHD1L1Q86WI1 4243 aa2.34□□□□□ -2.03
PDLIM5-211ENST00000508531 FSIP2Q5CZC0 6907 aa2.33□□□□□ -2.04
PDLIM5-211ENST00000508531 FAT3Q8TDW7 4589 aa2.33□□□□□ -2.04
PDLIM5-211ENST00000508531 KRTAP10-10P60014 251 aa2.32□□□□□ -2.04
PDLIM5-211ENST00000508531 S4R3F8 94 aa2.32□□□□□ -2.04
PDLIM5-211ENST00000508531 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
PDLIM5-211ENST00000508531 CRCT1Q9UGL9 99 aa2.31□□□□□ -2.04
PDLIM5-211ENST00000508531 M0QZ58 72 aa2.3□□□□□ -2.04
PDLIM5-211ENST00000508531 Q6ZRN7 208 aaPredicted RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms