RNA–Protein interactions for RNA: ENST00000504985.5

SSBP2-204, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-204ENST00000504985 C14orf177Q52M58 125 aa4□□□□□ -1.77
SSBP2-204ENST00000504985 Q5W150 140 aa4□□□□□ -1.77
SSBP2-204ENST00000504985 DNAH6Q9C0G6 4158 aa4□□□□□ -1.77
SSBP2-204ENST00000504985 A0A087WTM6 91 aa3.99□□□□□ -1.77
SSBP2-204ENST00000504985 NDUFAF8A1L188 74 aa3.99□□□□□ -1.77
SSBP2-204ENST00000504985 A0A096LNI7 61 aa3.98□□□□□ -1.77
SSBP2-204ENST00000504985 KRTAP7-1Q8IUC3 87 aa3.98□□□□□ -1.77
SSBP2-204ENST00000504985 MRPL34Q9BQ48 92 aaKnown RBP3.98□□□□□ -1.77
SSBP2-204ENST00000504985 KIAA1109Q2LD37 5005 aa3.97□□□□□ -1.77
SSBP2-204ENST00000504985 FAM168BA1KXE4 195 aa3.97□□□□□ -1.77
SSBP2-204ENST00000504985 KRTAP4-16G5E9R7 235 aaPredicted RBP3.97□□□□□ -1.77
SSBP2-204ENST00000504985 KRTAP5-4Q6L8H1 288 aa3.97□□□□□ -1.77
SSBP2-204ENST00000504985 KMT2AQ03164 3969 aa3.97□□□□□ -1.77
SSBP2-204ENST00000504985 ABCA13Q86UQ4 5058 aa3.96□□□□□ -1.77
SSBP2-204ENST00000504985 KRTAP10-12P60413 245 aa3.96□□□□□ -1.78
SSBP2-204ENST00000504985 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
SSBP2-204ENST00000504985 LINC00304Q8N9R0 145 aa3.95□□□□□ -1.78
SSBP2-204ENST00000504985 DNAH2Q9P225 4427 aa3.94□□□□□ -1.78
SSBP2-204ENST00000504985 PANO1I0J062 215 aa3.94□□□□□ -1.78
SSBP2-204ENST00000504985 A0A1W2PNN7 141 aa3.93□□□□□ -1.78
SSBP2-204ENST00000504985 KRTAP4-4Q9BYR3 166 aa3.93□□□□□ -1.78
SSBP2-204ENST00000504985 SSBP3-AS1Q7Z2R9 100 aa3.92□□□□□ -1.78
SSBP2-204ENST00000504985 A0A1B0GVX0 72 aa3.91□□□□□ -1.78
SSBP2-204ENST00000504985 CAMK2N1Q7Z7J9 78 aa3.91□□□□□ -1.78
SSBP2-204ENST00000504985 KRTAP11-1Q8IUC1 163 aa3.91□□□□□ -1.78
SSBP2-204ENST00000504985 SPACA4Q8TDM5 124 aa3.91□□□□□ -1.78
SSBP2-204ENST00000504985 DNAH17Q9UFH2 4485 aa3.91□□□□□ -1.78
SSBP2-204ENST00000504985 SPRR1BP22528 89 aa3.9□□□□□ -1.78
SSBP2-204ENST00000504985 ANAPC11Q9NYG5 84 aa3.9□□□□□ -1.78
SSBP2-204ENST00000504985 FAT2Q9NYQ8 4349 aa3.88□□□□□ -1.79
SSBP2-204ENST00000504985 PKD1P98161 4303 aa3.88□□□□□ -1.79
SSBP2-204ENST00000504985 UBR4Q5T4S7 5183 aa3.88□□□□□ -1.79
SSBP2-204ENST00000504985 KRTAP5-9P26371 169 aa3.88□□□□□ -1.79
SSBP2-204ENST00000504985 DNAH11Q96DT5 4516 aa3.87□□□□□ -1.79
SSBP2-204ENST00000504985 KRTAP10-1P60331 282 aa3.87□□□□□ -1.79
SSBP2-204ENST00000504985 Q6ZSA8 131 aa3.87□□□□□ -1.79
SSBP2-204ENST00000504985 HERC1Q15751 4861 aa3.87□□□□□ -1.79
SSBP2-204ENST00000504985 A0A1B0GVY2 172 aa3.86□□□□□ -1.79
SSBP2-204ENST00000504985 Q96NJ1 140 aa3.85□□□□□ -1.79
SSBP2-204ENST00000504985 A0A1B0GU33 70 aa3.83□□□□□ -1.8
SSBP2-204ENST00000504985 PRLHP81277 87 aa3.83□□□□□ -1.8
SSBP2-204ENST00000504985 KRTAP13-1Q8IUC0 172 aa3.83□□□□□ -1.8
SSBP2-204ENST00000504985 CIRBP-AS1Q8TBR5 109 aa3.83□□□□□ -1.8
SSBP2-204ENST00000504985 PKHD1P08F94 4074 aa3.82□□□□□ -1.8
SSBP2-204ENST00000504985 DNAH5Q8TE73 4624 aa3.81□□□□□ -1.8
SSBP2-204ENST00000504985 A0A0G2JQZ4 141 aa3.81□□□□□ -1.8
SSBP2-204ENST00000504985 KRTAP13-3Q3SY46 172 aa3.81□□□□□ -1.8
SSBP2-204ENST00000504985 PSORS1C2Q9UIG4 136 aa3.81□□□□□ -1.8
SSBP2-204ENST00000504985 CRIPTQ9P021 101 aa3.8□□□□□ -1.8
SSBP2-204ENST00000504985 SRRM2Q9UQ35 2752 aaKnown RBP3.79□□□□□ -1.8
SSBP2-204ENST00000504985 COX6B2Q6YFQ2 88 aa3.78□□□□□ -1.8
SSBP2-204ENST00000504985 DNAH8Q96JB1 4490 aa3.78□□□□□ -1.8
SSBP2-204ENST00000504985 H0YAA0 97 aa3.77□□□□□ -1.81
SSBP2-204ENST00000504985 H1FX-AS1Q4G0G2 97 aa3.76□□□□□ -1.81
SSBP2-204ENST00000504985 DMBT1Q9UGM3 2413 aaPredicted RBP3.74□□□□□ -1.81
SSBP2-204ENST00000504985 HSPG2P98160 4391 aa3.74□□□□□ -1.81
SSBP2-204ENST00000504985 DYNC1H1Q14204 4646 aaKnown RBP3.74□□□□□ -1.81
SSBP2-204ENST00000504985 LRP1BQ9NZR2 4599 aa3.73□□□□□ -1.81
SSBP2-204ENST00000504985 SMR3BP02814 79 aaPredicted RBP3.72□□□□□ -1.81
SSBP2-204ENST00000504985 KRTAP10-4P60372 401 aaPredicted RBP3.72□□□□□ -1.81
SSBP2-204ENST00000504985 APOBP04114 4563 aaKnown RBP3.7□□□□□ -1.82
SSBP2-204ENST00000504985 RPL37P61927 97 aaKnown RBP3.7□□□□□ -1.82
SSBP2-204ENST00000504985 LCE3CQ5T5A8 94 aa3.7□□□□□ -1.82
SSBP2-204ENST00000504985 KRTAP1-4P0C5Y4 121 aa3.69□□□□□ -1.82
SSBP2-204ENST00000504985 TPRXLQ17RH7 258 aa3.69□□□□□ -1.82
SSBP2-204ENST00000504985 VPS13BQ7Z7G8 4022 aa3.66□□□□□ -1.82
SSBP2-204ENST00000504985 SPINK1P00995 79 aa3.66□□□□□ -1.82
SSBP2-204ENST00000504985 KRTAP13-2Q52LG2 175 aa3.66□□□□□ -1.82
SSBP2-204ENST00000504985 SPINK6Q6UWN8 80 aa3.65□□□□□ -1.82
SSBP2-204ENST00000504985 MYCBP2O75592 4640 aa3.64□□□□□ -1.83
SSBP2-204ENST00000504985 Q5VSD8 79 aa3.63□□□□□ -1.83
SSBP2-204ENST00000504985 PKHD1L1Q86WI1 4243 aa3.62□□□□□ -1.83
SSBP2-204ENST00000504985 PLAC4Q8WY50 150 aa3.62□□□□□ -1.83
SSBP2-204ENST00000504985 FAT1Q14517 4588 aa3.61□□□□□ -1.83
SSBP2-204ENST00000504985 OBSCNQ5VST9 7968 aa3.6□□□□□ -1.83
SSBP2-204ENST00000504985 TYMSOSQ8TAI1 123 aa3.59□□□□□ -1.83
SSBP2-204ENST00000504985 HMCN2Q8NDA2 5059 aa3.59□□□□□ -1.84
SSBP2-204ENST00000504985 RNF213Q63HN8 5207 aa3.56□□□□□ -1.84
SSBP2-204ENST00000504985 FLG2Q5D862 2391 aaPredicted RBP3.55□□□□□ -1.84
SSBP2-204ENST00000504985 PRO2289Q9P1D8 64 aa3.55□□□□□ -1.84
SSBP2-204ENST00000504985 KRTAP10-8P60410 259 aa3.53□□□□□ -1.84
SSBP2-204ENST00000504985 RPS29P62273 56 aaKnown RBP3.53□□□□□ -1.84
SSBP2-204ENST00000504985 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
SSBP2-204ENST00000504985 MT1HL1P0DM35 61 aa3.52□□□□□ -1.85
SSBP2-204ENST00000504985 LRP1Q07954 4544 aaKnown RBP3.5□□□□□ -1.85
SSBP2-204ENST00000504985 TNXBP22105 4242 aa3.48□□□□□ -1.85
SSBP2-204ENST00000504985 FAT3Q8TDW7 4589 aa3.48□□□□□ -1.85
SSBP2-204ENST00000504985 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
SSBP2-204ENST00000504985 S4R3F8 94 aa3.46□□□□□ -1.86
SSBP2-204ENST00000504985 INE1O15225 51 aa3.44□□□□□ -1.86
SSBP2-204ENST00000504985 A0A0D9SG42 100 aa3.42□□□□□ -1.86
SSBP2-204ENST00000504985 LRP2P98164 4655 aa3.41□□□□□ -1.86
SSBP2-204ENST00000504985 R4GN34 69 aa3.4□□□□□ -1.86
SSBP2-204ENST00000504985 C9orf92A6NGG3 77 aa3.39□□□□□ -1.87
SSBP2-204ENST00000504985 PP632Q6XCG6 107 aa3.38□□□□□ -1.87
SSBP2-204ENST00000504985 FAT4Q6V0I7 4981 aa3.36□□□□□ -1.87
SSBP2-204ENST00000504985 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
SSBP2-204ENST00000504985 MUC2Q02817 5179 aa3.35□□□□□ -1.87
SSBP2-204ENST00000504985 LCE3AQ5TA76 89 aa3.33□□□□□ -1.88
SSBP2-204ENST00000504985 M0QZ58 72 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms