RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 KRTAP23-1A1A580 65 aa6.85□□□□□ -1.31
C4A-259ENST00000498271 DNAH10Q8IVF4 4471 aa6.81□□□□□ -1.32
C4A-259ENST00000498271 DNAH5Q8TE73 4624 aa6.78□□□□□ -1.32
C4A-259ENST00000498271 KRTAP4-5Q9BYR2 181 aa6.76□□□□□ -1.33
C4A-259ENST00000498271 VPS13DQ5THJ4 4388 aa6.75□□□□□ -1.33
C4A-259ENST00000498271 DNAH11Q96DT5 4516 aa6.74□□□□□ -1.33
C4A-259ENST00000498271 DNAH17Q9UFH2 4485 aa6.72□□□□□ -1.33
C4A-259ENST00000498271 STARD9Q9P2P6 4700 aa6.65□□□□□ -1.34
C4A-259ENST00000498271 DNHD1Q96M86 4753 aa6.59□□□□□ -1.35
C4A-259ENST00000498271 DNAH3Q8TD57 4116 aa6.58□□□□□ -1.36
C4A-259ENST00000498271 DNAH2Q9P225 4427 aa6.57□□□□□ -1.36
C4A-259ENST00000498271 KRTAP10-12P60413 245 aa6.57□□□□□ -1.36
C4A-259ENST00000498271 DNAH8Q96JB1 4490 aa6.52□□□□□ -1.36
C4A-259ENST00000498271 DYNC1H1Q14204 4646 aaKnown RBP6.52□□□□□ -1.37
C4A-259ENST00000498271 LRP1BQ9NZR2 4599 aa6.5□□□□□ -1.37
C4A-259ENST00000498271 KRTAP12-3P60328 96 aa6.49□□□□□ -1.37
C4A-259ENST00000498271 ANK2Q01484 3957 aa6.48□□□□□ -1.37
C4A-259ENST00000498271 PRKDCP78527 4128 aaKnown RBP6.48□□□□□ -1.37
C4A-259ENST00000498271 LORP23490 312 aaPredicted RBP6.48□□□□□ -1.37
C4A-259ENST00000498271 FAT1Q14517 4588 aa6.46□□□□□ -1.37
C4A-259ENST00000498271 DYNC2H1Q8NCM8 4307 aaKnown RBP6.43□□□□□ -1.38
C4A-259ENST00000498271 KMT2AQ03164 3969 aa6.42□□□□□ -1.38
C4A-259ENST00000498271 SACSQ9NZJ4 4579 aa6.41□□□□□ -1.38
C4A-259ENST00000498271 LCE3AQ5TA76 89 aa6.39□□□□□ -1.39
C4A-259ENST00000498271 CMYA5Q8N3K9 4069 aa6.37□□□□□ -1.39
C4A-259ENST00000498271 FAT2Q9NYQ8 4349 aa6.35□□□□□ -1.39
C4A-259ENST00000498271 KRTAP4-1Q9BYQ7 146 aa6.31□□□□□ -1.4
C4A-259ENST00000498271 VPS13BQ7Z7G8 4022 aa6.29□□□□□ -1.4
C4A-259ENST00000498271 FRAS1Q86XX4 4008 aa6.24□□□□□ -1.41
C4A-259ENST00000498271 LYSTQ99698 3801 aa6.23□□□□□ -1.41
C4A-259ENST00000498271 KRTAP8-1Q8IUC2 63 aa6.22□□□□□ -1.41
C4A-259ENST00000498271 RYR1P21817 5038 aa6.22□□□□□ -1.41
C4A-259ENST00000498271 APOBP04114 4563 aaKnown RBP6.18□□□□□ -1.42
C4A-259ENST00000498271 HECTD4Q9Y4D8 3996 aa6.17□□□□□ -1.42
C4A-259ENST00000498271 DNAH6Q9C0G6 4158 aa6.16□□□□□ -1.42
C4A-259ENST00000498271 DNAH7Q8WXX0 4024 aa6.14□□□□□ -1.43
C4A-259ENST00000498271 CRCT1Q9UGL9 99 aa6.1□□□□□ -1.43
C4A-259ENST00000498271 MYCBP2O75592 4640 aa6.06□□□□□ -1.44
C4A-259ENST00000498271 MT1HP80294 61 aa6.04□□□□□ -1.44
C4A-259ENST00000498271 KRTAP17-1Q9BYP8 105 aa6.03□□□□□ -1.44
C4A-259ENST00000498271 KIAA1109Q2LD37 5005 aa6.02□□□□□ -1.45
C4A-259ENST00000498271 LRP1Q07954 4544 aaKnown RBP5.99□□□□□ -1.45
C4A-259ENST00000498271 RYR3Q15413 4870 aa5.98□□□□□ -1.45
C4A-259ENST00000498271 SPRR2GQ9BYE4 73 aa5.98□□□□□ -1.45
C4A-259ENST00000498271 KRTAP10-5P60370 271 aa5.97□□□□□ -1.45
C4A-259ENST00000498271 MT2AP02795 61 aa5.96□□□□□ -1.46
C4A-259ENST00000498271 HYDINQ4G0P3 5121 aa5.95□□□□□ -1.46
C4A-259ENST00000498271 FAT3Q8TDW7 4589 aa5.94□□□□□ -1.46
C4A-259ENST00000498271 RYR2Q92736 4967 aa5.9□□□□□ -1.46
C4A-259ENST00000498271 MT1FP04733 61 aa5.88□□□□□ -1.47
C4A-259ENST00000498271 KRTAP19-4Q3LI73 84 aa5.86□□□□□ -1.47
C4A-259ENST00000498271 PKHD1P08F94 4074 aa5.82□□□□□ -1.48
C4A-259ENST00000498271 KRTAP10-7P60409 375 aaPredicted RBP5.8□□□□□ -1.48
C4A-259ENST00000498271 SPRR2FQ96RM1 72 aa5.78□□□□□ -1.48
C4A-259ENST00000498271 HSPG2P98160 4391 aa5.76□□□□□ -1.49
C4A-259ENST00000498271 PKD1P98161 4303 aa5.75□□□□□ -1.49
C4A-259ENST00000498271 LCE3CQ5T5A8 94 aa5.73□□□□□ -1.49
C4A-259ENST00000498271 LRP2P98164 4655 aa5.68□□□□□ -1.5
C4A-259ENST00000498271 KRTAP19-1Q8IUB9 90 aa5.68□□□□□ -1.5
C4A-259ENST00000498271 SPRR5A0A1B0GTR4 108 aa5.64□□□□□ -1.51
C4A-259ENST00000498271 HERC2O95714 4834 aa5.63□□□□□ -1.51
C4A-259ENST00000498271 KRTAP19-5Q3LI72 72 aa5.62□□□□□ -1.51
C4A-259ENST00000498271 KRTAP19-8Q3LI54 63 aa5.59□□□□□ -1.51
C4A-259ENST00000498271 PKHD1L1Q86WI1 4243 aa5.58□□□□□ -1.52
C4A-259ENST00000498271 SPRR2EP22531 72 aa5.56□□□□□ -1.52
C4A-259ENST00000498271 SPRR2BP35325 72 aa5.56□□□□□ -1.52
C4A-259ENST00000498271 SPRR2AP35326 72 aa5.56□□□□□ -1.52
C4A-259ENST00000498271 KMT2CQ8NEZ4 4911 aaKnown RBP5.55□□□□□ -1.52
C4A-259ENST00000498271 LPAP08519 4548 aa5.54□□□□□ -1.52
C4A-259ENST00000498271 TNXBP22105 4242 aa5.53□□□□□ -1.52
C4A-259ENST00000498271 LCE2CQ5TA81 110 aa5.49□□□□□ -1.53
C4A-259ENST00000498271 KRTAP9-8Q9BYQ0 159 aa5.47□□□□□ -1.53
C4A-259ENST00000498271 MT1XP80297 61 aa5.47□□□□□ -1.53
C4A-259ENST00000498271 BIRC6Q9NR09 4857 aa5.47□□□□□ -1.53
C4A-259ENST00000498271 MT1BP07438 61 aa5.45□□□□□ -1.54
C4A-259ENST00000498271 SPRR2DP22532 72 aa5.43□□□□□ -1.54
C4A-259ENST00000498271 HERC1Q15751 4861 aa5.4□□□□□ -1.55
C4A-259ENST00000498271 KRTAP19-2Q3LHN2 52 aa5.38□□□□□ -1.55
C4A-259ENST00000498271 LCE2BO14633 110 aa5.37□□□□□ -1.55
C4A-259ENST00000498271 KRTAP12-4P60329 112 aa5.35□□□□□ -1.55
C4A-259ENST00000498271 KRTAP9-3Q9BYQ3 159 aa5.31□□□□□ -1.56
C4A-259ENST00000498271 PCLOQ9Y6V0 5065 aa5.31□□□□□ -1.56
C4A-259ENST00000498271 EPPK1P58107 5090 aaKnown RBP5.27□□□□□ -1.57
C4A-259ENST00000498271 MUC17Q685J3 4493 aa5.26□□□□□ -1.57
C4A-259ENST00000498271 ABCA13Q86UQ4 5058 aa5.23□□□□□ -1.57
C4A-259ENST00000498271 FLGP20930 4061 aaPredicted RBP5.22□□□□□ -1.57
C4A-259ENST00000498271 KRTAP4-8A0A0G2JLE6 195 aa5.2□□□□□ -1.58
C4A-259ENST00000498271 KRTAP4-8Q9BYQ9 185 aa5.2□□□□□ -1.58
C4A-259ENST00000498271 MT1GP13640 62 aa5.17□□□□□ -1.58
C4A-259ENST00000498271 KRTAP9-2Q9BYQ4 174 aa5.14□□□□□ -1.59
C4A-259ENST00000498271 KRTAP9-6A0A140TA67 174 aa5.12□□□□□ -1.59
C4A-259ENST00000498271 LCE3BQ5TA77 95 aa5.09□□□□□ -1.59
C4A-259ENST00000498271 LCE2DQ5TA82 110 aaPredicted RBP5.08□□□□□ -1.6
C4A-259ENST00000498271 LCE3DQ9BYE3 92 aa5.03□□□□□ -1.61
C4A-259ENST00000498271 LCE3EQ5T5B0 92 aa5□□□□□ -1.61
C4A-259ENST00000498271 FAT4Q6V0I7 4981 aa4.94□□□□□ -1.62
C4A-259ENST00000498271 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
C4A-259ENST00000498271 RNF213Q63HN8 5207 aa4.92□□□□□ -1.62
C4A-259ENST00000498271 KRTAP19-6Q3LI70 58 aa4.9□□□□□ -1.62
C4A-259ENST00000498271 MT1LQ93083 61 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms