RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 KRTAP7-1Q8IUC3 87 aa0.69□□□□□ -2.3
XRN1-214ENST00000498077 MYH1P12882 1939 aa0.69□□□□□ -2.3
XRN1-214ENST00000498077 MYH11P35749 1972 aa0.68□□□□□ -2.3
XRN1-214ENST00000498077 RHPN1-AS1Q9BWJ2 59 aa0.68□□□□□ -2.3
XRN1-214ENST00000498077 DNAH5Q8TE73 4624 aa0.68□□□□□ -2.3
XRN1-214ENST00000498077 H0YAA0 97 aa0.68□□□□□ -2.3
XRN1-214ENST00000498077 SPRR2DP22532 72 aa0.68□□□□□ -2.3
XRN1-214ENST00000498077 DEFB127Q9H1M4 99 aa0.68□□□□□ -2.3
XRN1-214ENST00000498077 ST20Q9HBF5 79 aa0.68□□□□□ -2.3
XRN1-214ENST00000498077 A0A1B0GVX0 72 aa0.68□□□□□ -2.3
XRN1-214ENST00000498077 SPRR2EP22531 72 aa0.68□□□□□ -2.3
XRN1-214ENST00000498077 SPRR2BP35325 72 aa0.68□□□□□ -2.3
XRN1-214ENST00000498077 SPRR2AP35326 72 aa0.68□□□□□ -2.3
XRN1-214ENST00000498077 RIPPLY1Q0D2K3 151 aa0.68□□□□□ -2.3
XRN1-214ENST00000498077 LCE1CQ5T751 118 aa0.68□□□□□ -2.3
XRN1-214ENST00000498077 LCE1FQ5T754 118 aa0.68□□□□□ -2.3
XRN1-214ENST00000498077 APOBP04114 4563 aaKnown RBP0.67□□□□□ -2.3
XRN1-214ENST00000498077 C9orf62Q8N4C0 152 aa0.67□□□□□ -2.3
XRN1-214ENST00000498077 A0A1B0GU33 70 aa0.67□□□□□ -2.3
XRN1-214ENST00000498077 IGLC6P0CF74 106 aa0.67□□□□□ -2.3
XRN1-214ENST00000498077 SMIM10L1P0DMW3 83 aa0.67□□□□□ -2.3
XRN1-214ENST00000498077 SRP9P49458 86 aaKnown RBP0.67□□□□□ -2.3
XRN1-214ENST00000498077 LINC00313P59037 77 aa0.67□□□□□ -2.3
XRN1-214ENST00000498077 SMIM10Q96HG1 83 aa0.67□□□□□ -2.3
XRN1-214ENST00000498077 DENND4CQ5VZ89 1909 aa0.67□□□□□ -2.3
XRN1-214ENST00000498077 ADGRG4Q8IZF6 3080 aa0.67□□□□□ -2.3
XRN1-214ENST00000498077 CD24P25063 80 aa0.67□□□□□ -2.3
XRN1-214ENST00000498077 GNG4P50150 75 aa0.67□□□□□ -2.3
XRN1-214ENST00000498077 LSM10Q969L4 123 aaKnown RBP0.67□□□□□ -2.3
XRN1-214ENST00000498077 TDRD15B5MCY1 1934 aaKnown RBP0.67□□□□□ -2.3
XRN1-214ENST00000498077 ATOX1O00244 68 aa0.66□□□□□ -2.3
XRN1-214ENST00000498077 UQCRQO14949 82 aa0.66□□□□□ -2.3
XRN1-214ENST00000498077 KRTAP10-3P60369 221 aa0.66□□□□□ -2.3
XRN1-214ENST00000498077 PTH2Q96A98 100 aa0.66□□□□□ -2.3
XRN1-214ENST00000498077 TNP1P09430 55 aa0.66□□□□□ -2.3
XRN1-214ENST00000498077 Q8N2B8 174 aa0.66□□□□□ -2.3
XRN1-214ENST00000498077 TRBV7-3A0A075B6L6 115 aa0.66□□□□□ -2.3
XRN1-214ENST00000498077 MT1HL1P0DM35 61 aa0.66□□□□□ -2.3
XRN1-214ENST00000498077 MRPS14O60783 128 aaKnown RBP0.65□□□□□ -2.3
XRN1-214ENST00000498077 H3BUA1 57 aa0.65□□□□□ -2.31
XRN1-214ENST00000498077 LINC00467Q9BRT7 94 aa0.65□□□□□ -2.31
XRN1-214ENST00000498077 MYMXA0A1B0GTQ4 84 aa0.65□□□□□ -2.31
XRN1-214ENST00000498077 LINC01549A6NIU2 74 aa0.65□□□□□ -2.31
XRN1-214ENST00000498077 ATP6V0E2Q8NHE4 81 aa0.65□□□□□ -2.31
XRN1-214ENST00000498077 TP53TG1Q9Y2A0 90 aa0.65□□□□□ -2.31
XRN1-214ENST00000498077 KRTAP9-6A8MVA2 160 aa0.65□□□□□ -2.31
XRN1-214ENST00000498077 FLGP20930 4061 aaPredicted RBP0.65□□□□□ -2.31
XRN1-214ENST00000498077 TMEM167AQ8TBQ9 72 aa0.64□□□□□ -2.31
XRN1-214ENST00000498077 LINC00474Q9P2X8 69 aa0.64□□□□□ -2.31
XRN1-214ENST00000498077 NUPR1O60356 82 aa0.64□□□□□ -2.31
XRN1-214ENST00000498077 KRTAP10-10P60014 251 aa0.64□□□□□ -2.31
XRN1-214ENST00000498077 ANAPC1Q9H1A4 1944 aa0.64□□□□□ -2.31
XRN1-214ENST00000498077 BVES-AS1Q5T3Y7 98 aa0.64□□□□□ -2.31
XRN1-214ENST00000498077 LINC00308Q8TCZ7 52 aa0.64□□□□□ -2.31
XRN1-214ENST00000498077 A0A087WTM6 91 aa0.64□□□□□ -2.31
XRN1-214ENST00000498077 H3BQ15 152 aa0.64□□□□□ -2.31
XRN1-214ENST00000498077 CCDC179H3BU77 68 aa0.64□□□□□ -2.31
XRN1-214ENST00000498077 NDUFA1O15239 70 aa0.64□□□□□ -2.31
XRN1-214ENST00000498077 MYH7P12883 1935 aa0.64□□□□□ -2.31
XRN1-214ENST00000498077 FAM167A-AS1Q96KT0 104 aa0.63□□□□□ -2.31
XRN1-214ENST00000498077 DNAJC15Q9Y5T4 150 aa0.63□□□□□ -2.31
XRN1-214ENST00000498077 DEFB131AP59861 70 aa0.63□□□□□ -2.31
XRN1-214ENST00000498077 DLEU1O43261 78 aa0.62□□□□□ -2.31
XRN1-214ENST00000498077 Q6ZT83 130 aa0.62□□□□□ -2.31
XRN1-214ENST00000498077 KCNE3Q9Y6H6 103 aa0.62□□□□□ -2.31
XRN1-214ENST00000498077 TOMM5Q8N4H5 51 aa0.62□□□□□ -2.31
XRN1-214ENST00000498077 HRNRQ86YZ3 2850 aaPredicted RBP0.62□□□□□ -2.31
XRN1-214ENST00000498077 GVQW2A0A096LPI5 108 aaPredicted RBP0.62□□□□□ -2.31
XRN1-214ENST00000498077 SNRPGP15A8MWD9 76 aa0.62□□□□□ -2.31
XRN1-214ENST00000498077 CCL20P78556 96 aa0.62□□□□□ -2.31
XRN1-214ENST00000498077 TDRG1Q3Y452 100 aa0.62□□□□□ -2.31
XRN1-214ENST00000498077 ARHGAP5-AS1Q96IT6 56 aa0.62□□□□□ -2.31
XRN1-214ENST00000498077 MUC17Q685J3 4493 aa0.62□□□□□ -2.31
XRN1-214ENST00000498077 LINC00587B1AMM8 73 aa0.62□□□□□ -2.31
XRN1-214ENST00000498077 LCE1BQ5T7P3 118 aa0.62□□□□□ -2.31
XRN1-214ENST00000498077 NBEAP1P0C6P0 100 aa0.61□□□□□ -2.31
XRN1-214ENST00000498077 DEFB131BA0A096LNP1 70 aa0.61□□□□□ -2.31
XRN1-214ENST00000498077 I3L2K1 104 aa0.61□□□□□ -2.31
XRN1-214ENST00000498077 KRTAP19-8Q3LI54 63 aa0.61□□□□□ -2.31
XRN1-214ENST00000498077 BRI3O95415 125 aa0.61□□□□□ -2.31
XRN1-214ENST00000498077 RPL37P61927 97 aaKnown RBP0.61□□□□□ -2.31
XRN1-214ENST00000498077 COX14Q96I36 57 aa0.61□□□□□ -2.31
XRN1-214ENST00000498077 ANKRD36A6QL64 1941 aa0.6□□□□□ -2.31
XRN1-214ENST00000498077 E7EUB6 86 aa0.6□□□□□ -2.31
XRN1-214ENST00000498077 CTXN2P0C2S0 81 aa0.59□□□□□ -2.31
XRN1-214ENST00000498077 CCL8P80075 99 aa0.59□□□□□ -2.31
XRN1-214ENST00000498077 MT1HP80294 61 aa0.59□□□□□ -2.31
XRN1-214ENST00000498077 HMGN2P05204 90 aaKnown RBP0.59□□□□□ -2.32
XRN1-214ENST00000498077 CCL2P13500 99 aa0.59□□□□□ -2.32
XRN1-214ENST00000498077 TMEM167BQ9NRX6 74 aa0.59□□□□□ -2.32
XRN1-214ENST00000498077 CHCHD2Q9Y6H1 151 aaPredicted RBP0.59□□□□□ -2.32
XRN1-214ENST00000498077 CNFNQ9BYD5 112 aa0.58□□□□□ -2.32
XRN1-214ENST00000498077 MYH6P13533 1939 aa0.58□□□□□ -2.32
XRN1-214ENST00000498077 SNRPFP62306 86 aaKnown RBP0.57□□□□□ -2.32
XRN1-214ENST00000498077 TPRXLQ17RH7 258 aa0.57□□□□□ -2.32
XRN1-214ENST00000498077 LINC00472Q9H8W2 130 aa0.57□□□□□ -2.32
XRN1-214ENST00000498077 NBDYA0A0U1RRE5 68 aa0.57□□□□□ -2.32
XRN1-214ENST00000498077 C12orf73Q69YU5 71 aa0.57□□□□□ -2.32
XRN1-214ENST00000498077 PHF5AQ7RTV0 110 aaKnown RBP0.57□□□□□ -2.32
XRN1-214ENST00000498077 TEX37Q96LM6 180 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms