RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 CCL3L1P16619 93 aa1.09□□□□□ -2.23
CBX3-208ENST00000497498 CCL18P55774 89 aa1.09□□□□□ -2.23
CBX3-208ENST00000497498 KRTAP12-1P59990 96 aa1.09□□□□□ -2.23
CBX3-208ENST00000497498 DEFB112Q30KQ8 113 aa1.09□□□□□ -2.23
CBX3-208ENST00000497498 MINOS1Q5TGZ0 78 aa1.09□□□□□ -2.23
CBX3-208ENST00000497498 COA5Q86WW8 74 aa1.09□□□□□ -2.23
CBX3-208ENST00000497498 DMAC1Q96GE9 116 aa1.09□□□□□ -2.23
CBX3-208ENST00000497498 TP53AIP1Q9HCN2 124 aa1.09□□□□□ -2.23
CBX3-208ENST00000497498 PLAC8Q9NZF1 115 aa1.09□□□□□ -2.23
CBX3-208ENST00000497498 KAAG1Q9UBP8 84 aa1.09□□□□□ -2.23
CBX3-208ENST00000497498 MUC12Q9UKN1 5478 aa1.09□□□□□ -2.23
CBX3-208ENST00000497498 KMT2DO14686 5537 aa1.09□□□□□ -2.24
CBX3-208ENST00000497498 IGLV1-51P01701 117 aa1.08□□□□□ -2.24
CBX3-208ENST00000497498 ROMO1P60602 79 aa1.08□□□□□ -2.24
CBX3-208ENST00000497498 KRTAP20-1Q3LI63 56 aa1.08□□□□□ -2.24
CBX3-208ENST00000497498 C1orf137Q5JT78 98 aa1.08□□□□□ -2.24
CBX3-208ENST00000497498 C1orf134Q5TEV5 83 aa1.08□□□□□ -2.24
CBX3-208ENST00000497498 Q6ZQY7 126 aa1.08□□□□□ -2.24
CBX3-208ENST00000497498 Q6ZTI0 123 aa1.08□□□□□ -2.24
CBX3-208ENST00000497498 LEAP2Q969E1 77 aa1.08□□□□□ -2.24
CBX3-208ENST00000497498 USMG5Q96IX5 58 aa1.08□□□□□ -2.24
CBX3-208ENST00000497498 AHNAK2Q8IVF2 5795 aa1.07□□□□□ -2.24
CBX3-208ENST00000497498 CLPSL1A2RUU4 121 aa1.07□□□□□ -2.24
CBX3-208ENST00000497498 MIR22HGQ0VDD5 57 aa1.07□□□□□ -2.24
CBX3-208ENST00000497498 SPATA8Q6RVD6 105 aa1.07□□□□□ -2.24
CBX3-208ENST00000497498 C9orf163Q8N9P6 203 aa1.07□□□□□ -2.24
CBX3-208ENST00000497498 C4orf3Q8WVX3 66 aa1.07□□□□□ -2.24
CBX3-208ENST00000497498 TOMM7Q9P0U1 55 aa1.07□□□□□ -2.24
CBX3-208ENST00000497498 DSCAML1Q8TD84 2053 aa1.07□□□□□ -2.24
CBX3-208ENST00000497498 TNCP24821 2201 aa1.07□□□□□ -2.24
CBX3-208ENST00000497498 IGLV5-48A0A075B6I7 105 aa1.06□□□□□ -2.24
CBX3-208ENST00000497498 GVQW2A0A096LPI5 108 aaPredicted RBP1.06□□□□□ -2.24
CBX3-208ENST00000497498 LY6G6CO95867 125 aa1.06□□□□□ -2.24
CBX3-208ENST00000497498 ACYP2P14621 99 aa1.06□□□□□ -2.24
CBX3-208ENST00000497498 Q8NDZ9 215 aa1.06□□□□□ -2.24
CBX3-208ENST00000497498 PATE1Q8WXA2 126 aa1.06□□□□□ -2.24
CBX3-208ENST00000497498 SPRR4Q96PI1 79 aa1.06□□□□□ -2.24
CBX3-208ENST00000497498 FAM215AQ9Y5M1 114 aa1.06□□□□□ -2.24
CBX3-208ENST00000497498 A0A1B0GU69 56 aa1.05□□□□□ -2.24
CBX3-208ENST00000497498 NUPR2A6NF83 97 aa1.05□□□□□ -2.24
CBX3-208ENST00000497498 A8MTW9 85 aa1.05□□□□□ -2.24
CBX3-208ENST00000497498 ODF3BA8MYP8 253 aa1.05□□□□□ -2.24
CBX3-208ENST00000497498 DEFB131AP59861 70 aa1.05□□□□□ -2.24
CBX3-208ENST00000497498 COX6A2Q02221 97 aa1.05□□□□□ -2.24
CBX3-208ENST00000497498 CSAG1Q6PB30 78 aa1.05□□□□□ -2.24
CBX3-208ENST00000497498 TTTY12Q9BZ98 90 aa1.05□□□□□ -2.24
CBX3-208ENST00000497498 MDN1Q9NU22 5596 aa1.05□□□□□ -2.24
CBX3-208ENST00000497498 DNAH8Q96JB1 4490 aa1.05□□□□□ -2.24
CBX3-208ENST00000497498 TRGV1A0A0A0MS02 117 aa1.04□□□□□ -2.24
CBX3-208ENST00000497498 LINC00959A0A1B0GUT2 108 aa1.04□□□□□ -2.24
CBX3-208ENST00000497498 B4DSR2 109 aa1.04□□□□□ -2.24
CBX3-208ENST00000497498 H3BUX3 64 aa1.04□□□□□ -2.24
CBX3-208ENST00000497498 ANGP03950 147 aaKnown RBP1.04□□□□□ -2.24
CBX3-208ENST00000497498 APELAP0DMC3 54 aa1.04□□□□□ -2.24
CBX3-208ENST00000497498 SPINK7P58062 85 aa1.04□□□□□ -2.24
CBX3-208ENST00000497498 DEFB108BQ8NET1 73 aa1.04□□□□□ -2.24
CBX3-208ENST00000497498 RHPN1-AS1Q9BWJ2 59 aa1.04□□□□□ -2.24
CBX3-208ENST00000497498 A0A0G2JQZ4 141 aa1.03□□□□□ -2.24
CBX3-208ENST00000497498 LYNX1G3V0Z9 82 aa1.03□□□□□ -2.24
CBX3-208ENST00000497498 K7EQZ3 153 aa1.03□□□□□ -2.24
CBX3-208ENST00000497498 TFF1P04155 84 aa1.03□□□□□ -2.24
CBX3-208ENST00000497498 LPAP08519 4548 aa1.02□□□□□ -2.25
CBX3-208ENST00000497498 M0R2N4 97 aa1.02□□□□□ -2.25
CBX3-208ENST00000497498 SPINK13Q1W4C9 94 aa1.02□□□□□ -2.25
CBX3-208ENST00000497498 Q5VSD8 79 aa1.02□□□□□ -2.25
CBX3-208ENST00000497498 WFDC10BQ8IUB3 73 aa1.02□□□□□ -2.25
CBX3-208ENST00000497498 C6orf48Q9UBA6 75 aa1.02□□□□□ -2.25
CBX3-208ENST00000497498 IGKV3-7A0A075B6H7 116 aa1.01□□□□□ -2.25
CBX3-208ENST00000497498 RPL37AP61513 92 aaKnown RBP1.01□□□□□ -2.25
CBX3-208ENST00000497498 PRB3Q04118 309 aaPredicted RBP1.01□□□□□ -2.25
CBX3-208ENST00000497498 KRTAP26-1Q6PEX3 210 aa1.01□□□□□ -2.25
CBX3-208ENST00000497498 COX6B2Q6YFQ2 88 aa1.01□□□□□ -2.25
CBX3-208ENST00000497498 Q6ZRX8 168 aa1.01□□□□□ -2.25
CBX3-208ENST00000497498 WFDC13Q8IUB5 93 aa1.01□□□□□ -2.25
CBX3-208ENST00000497498 C5orf56Q8N8D9 126 aa1.01□□□□□ -2.25
CBX3-208ENST00000497498 AHNAKQ09666 5890 aaKnown RBP1.01□□□□□ -2.25
CBX3-208ENST00000497498 DSTQ03001 7570 aaKnown RBP1□□□□□ -2.25
CBX3-208ENST00000497498 PCOTHQ58A44 107 aa1□□□□□ -2.25
CBX3-208ENST00000497498 DEFB104AQ8WTQ1 72 aa1□□□□□ -2.25
CBX3-208ENST00000497498 IGKV3OR2-268A0A0C4DH90 116 aa0.99□□□□□ -2.25
CBX3-208ENST00000497498 MMP24-AS1A0A0U1RRL7 71 aa0.99□□□□□ -2.25
CBX3-208ENST00000497498 HTN1P15515 57 aa0.99□□□□□ -2.25
CBX3-208ENST00000497498 SPRR1AP35321 89 aa0.99□□□□□ -2.25
CBX3-208ENST00000497498 PRO0255Q9UI72 69 aa0.99□□□□□ -2.25
CBX3-208ENST00000497498 MUC17Q685J3 4493 aa0.98□□□□□ -2.25
CBX3-208ENST00000497498 G3V318 75 aa0.98□□□□□ -2.25
CBX3-208ENST00000497498 KRTAP2-3P0C7H8 128 aa0.98□□□□□ -2.25
CBX3-208ENST00000497498 DEFB105AQ8NG35 78 aa0.98□□□□□ -2.25
CBX3-208ENST00000497498 MRPL34Q9BQ48 92 aaKnown RBP0.98□□□□□ -2.25
CBX3-208ENST00000497498 KRTAP2-4Q9BYR9 128 aa0.98□□□□□ -2.25
CBX3-208ENST00000497498 SPRR1BP22528 89 aa0.97□□□□□ -2.25
CBX3-208ENST00000497498 UNQ6190/PRO20217Q6UXQ8 127 aa0.97□□□□□ -2.25
CBX3-208ENST00000497498 SSBP3-AS1Q7Z2R9 100 aa0.97□□□□□ -2.25
CBX3-208ENST00000497498 LINC00472Q9H8W2 130 aa0.97□□□□□ -2.25
CBX3-208ENST00000497498 NOP10Q9NPE3 64 aaKnown RBP0.97□□□□□ -2.25
CBX3-208ENST00000497498 CRIPTQ9P021 101 aa0.97□□□□□ -2.25
CBX3-208ENST00000497498 PSORS1C2Q9UIG4 136 aa0.97□□□□□ -2.25
CBX3-208ENST00000497498 A0A087WTM6 91 aa0.96□□□□□ -2.26
CBX3-208ENST00000497498 DEFB1P60022 68 aa0.96□□□□□ -2.26
CBX3-208ENST00000497498 TPRXLQ17RH7 258 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms