RNA–Protein interactions for RNA: ENST00000496281.1

RTEL1-TNFRSF6B-204, Transcript of RTEL1-TNFRSF6B readthrough (NMD candidate), humanhuman

TSL 2

Gene RTEL1-TNFRSF6B, Length 5,314 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTEL1-TNFRSF6B-204ENST00000496281 DNAH5Q8TE73 4624 aa7.67□□□□□ -1.18
RTEL1-TNFRSF6B-204ENST00000496281 CRCT1Q9UGL9 99 aa7.65□□□□□ -1.19
RTEL1-TNFRSF6B-204ENST00000496281 LCE3AQ5TA76 89 aa7.65□□□□□ -1.19
RTEL1-TNFRSF6B-204ENST00000496281 DNAH9Q9NYC9 4486 aa7.56□□□□□ -1.2
RTEL1-TNFRSF6B-204ENST00000496281 ALMS1Q8TCU4 4167 aa7.55□□□□□ -1.2
RTEL1-TNFRSF6B-204ENST00000496281 PLECQ15149 4684 aaKnown RBP7.55□□□□□ -1.2
RTEL1-TNFRSF6B-204ENST00000496281 ZNF469Q96JG9 3925 aaPredicted RBP7.55□□□□□ -1.2
RTEL1-TNFRSF6B-204ENST00000496281 DNAH11Q96DT5 4516 aa7.49□□□□□ -1.21
RTEL1-TNFRSF6B-204ENST00000496281 AKAP9Q99996 3911 aa7.45□□□□□ -1.22
RTEL1-TNFRSF6B-204ENST00000496281 DNHD1Q96M86 4753 aa7.44□□□□□ -1.22
RTEL1-TNFRSF6B-204ENST00000496281 DNAH10Q8IVF4 4471 aa7.44□□□□□ -1.22
RTEL1-TNFRSF6B-204ENST00000496281 DNAH1Q9P2D7 4330 aa7.43□□□□□ -1.22
RTEL1-TNFRSF6B-204ENST00000496281 FAT1Q14517 4588 aa7.43□□□□□ -1.22
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP4-1Q9BYQ7 146 aa7.4□□□□□ -1.23
RTEL1-TNFRSF6B-204ENST00000496281 DNAH2Q9P225 4427 aa7.39□□□□□ -1.23
RTEL1-TNFRSF6B-204ENST00000496281 DNAH17Q9UFH2 4485 aa7.37□□□□□ -1.23
RTEL1-TNFRSF6B-204ENST00000496281 VPS13DQ5THJ4 4388 aa7.28□□□□□ -1.24
RTEL1-TNFRSF6B-204ENST00000496281 DNAH8Q96JB1 4490 aa7.27□□□□□ -1.25
RTEL1-TNFRSF6B-204ENST00000496281 DYNC1H1Q14204 4646 aaKnown RBP7.24□□□□□ -1.25
RTEL1-TNFRSF6B-204ENST00000496281 RYR1P21817 5038 aa7.22□□□□□ -1.25
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP8-1Q8IUC2 63 aa7.2□□□□□ -1.26
RTEL1-TNFRSF6B-204ENST00000496281 SPRR2GQ9BYE4 73 aa7.2□□□□□ -1.26
RTEL1-TNFRSF6B-204ENST00000496281 MT1HP80294 61 aa7.19□□□□□ -1.26
RTEL1-TNFRSF6B-204ENST00000496281 LRP1BQ9NZR2 4599 aa7.16□□□□□ -1.26
RTEL1-TNFRSF6B-204ENST00000496281 DNAH3Q8TD57 4116 aa7.16□□□□□ -1.26
RTEL1-TNFRSF6B-204ENST00000496281 MT2AP02795 61 aa7.15□□□□□ -1.26
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP10-5P60370 271 aa7.13□□□□□ -1.27
RTEL1-TNFRSF6B-204ENST00000496281 SACSQ9NZJ4 4579 aa7.1□□□□□ -1.27
RTEL1-TNFRSF6B-204ENST00000496281 STARD9Q9P2P6 4700 aa7.06□□□□□ -1.28
RTEL1-TNFRSF6B-204ENST00000496281 MT1FP04733 61 aa7.01□□□□□ -1.29
RTEL1-TNFRSF6B-204ENST00000496281 DYNC2H1Q8NCM8 4307 aaKnown RBP7□□□□□ -1.29
RTEL1-TNFRSF6B-204ENST00000496281 MYCBP2O75592 4640 aa6.94□□□□□ -1.3
RTEL1-TNFRSF6B-204ENST00000496281 APOBP04114 4563 aaKnown RBP6.93□□□□□ -1.3
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP19-4Q3LI73 84 aa6.92□□□□□ -1.3
RTEL1-TNFRSF6B-204ENST00000496281 FAT2Q9NYQ8 4349 aa6.9□□□□□ -1.3
RTEL1-TNFRSF6B-204ENST00000496281 KIAA1109Q2LD37 5005 aa6.89□□□□□ -1.31
RTEL1-TNFRSF6B-204ENST00000496281 SPRR5A0A1B0GTR4 108 aa6.86□□□□□ -1.31
RTEL1-TNFRSF6B-204ENST00000496281 LCE3CQ5T5A8 94 aa6.86□□□□□ -1.31
RTEL1-TNFRSF6B-204ENST00000496281 PRKDCP78527 4128 aaKnown RBP6.85□□□□□ -1.31
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP19-5Q3LI72 72 aa6.84□□□□□ -1.31
RTEL1-TNFRSF6B-204ENST00000496281 ANK2Q01484 3957 aa6.83□□□□□ -1.32
RTEL1-TNFRSF6B-204ENST00000496281 VPS13BQ7Z7G8 4022 aa6.82□□□□□ -1.32
RTEL1-TNFRSF6B-204ENST00000496281 LYSTQ99698 3801 aa6.8□□□□□ -1.32
RTEL1-TNFRSF6B-204ENST00000496281 KMT2AQ03164 3969 aa6.75□□□□□ -1.33
RTEL1-TNFRSF6B-204ENST00000496281 RYR3Q15413 4870 aa6.72□□□□□ -1.33
RTEL1-TNFRSF6B-204ENST00000496281 SPRR2FQ96RM1 72 aa6.7□□□□□ -1.34
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP19-1Q8IUB9 90 aa6.7□□□□□ -1.34
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP17-1Q9BYP8 105 aa6.7□□□□□ -1.34
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP19-8Q3LI54 63 aa6.68□□□□□ -1.34
RTEL1-TNFRSF6B-204ENST00000496281 FAT3Q8TDW7 4589 aa6.66□□□□□ -1.34
RTEL1-TNFRSF6B-204ENST00000496281 CMYA5Q8N3K9 4069 aa6.65□□□□□ -1.34
RTEL1-TNFRSF6B-204ENST00000496281 LRP1Q07954 4544 aaKnown RBP6.64□□□□□ -1.35
RTEL1-TNFRSF6B-204ENST00000496281 DNAH6Q9C0G6 4158 aa6.63□□□□□ -1.35
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP10-7P60409 375 aaPredicted RBP6.62□□□□□ -1.35
RTEL1-TNFRSF6B-204ENST00000496281 FRAS1Q86XX4 4008 aa6.54□□□□□ -1.36
RTEL1-TNFRSF6B-204ENST00000496281 DNAH7Q8WXX0 4024 aa6.51□□□□□ -1.37
RTEL1-TNFRSF6B-204ENST00000496281 HECTD4Q9Y4D8 3996 aa6.5□□□□□ -1.37
RTEL1-TNFRSF6B-204ENST00000496281 RYR2Q92736 4967 aa6.5□□□□□ -1.37
RTEL1-TNFRSF6B-204ENST00000496281 MT1XP80297 61 aa6.48□□□□□ -1.37
RTEL1-TNFRSF6B-204ENST00000496281 LRP2P98164 4655 aa6.43□□□□□ -1.38
RTEL1-TNFRSF6B-204ENST00000496281 MT1BP07438 61 aa6.42□□□□□ -1.38
RTEL1-TNFRSF6B-204ENST00000496281 HERC2O95714 4834 aa6.4□□□□□ -1.38
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP9-8Q9BYQ0 159 aa6.38□□□□□ -1.39
RTEL1-TNFRSF6B-204ENST00000496281 LCE2CQ5TA81 110 aa6.29□□□□□ -1.4
RTEL1-TNFRSF6B-204ENST00000496281 HSPG2P98160 4391 aa6.29□□□□□ -1.4
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP4-8A0A0G2JLE6 195 aa6.27□□□□□ -1.41
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP4-8Q9BYQ9 185 aa6.27□□□□□ -1.41
RTEL1-TNFRSF6B-204ENST00000496281 PCLOQ9Y6V0 5065 aa6.26□□□□□ -1.41
RTEL1-TNFRSF6B-204ENST00000496281 PKD1P98161 4303 aa6.24□□□□□ -1.41
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP12-4P60329 112 aa6.23□□□□□ -1.41
RTEL1-TNFRSF6B-204ENST00000496281 LCE3BQ5TA77 95 aa6.23□□□□□ -1.41
RTEL1-TNFRSF6B-204ENST00000496281 MT1GP13640 62 aa6.22□□□□□ -1.41
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP9-3Q9BYQ3 159 aa6.22□□□□□ -1.41
RTEL1-TNFRSF6B-204ENST00000496281 SPRR2EP22531 72 aa6.18□□□□□ -1.42
RTEL1-TNFRSF6B-204ENST00000496281 SPRR2BP35325 72 aa6.18□□□□□ -1.42
RTEL1-TNFRSF6B-204ENST00000496281 SPRR2AP35326 72 aa6.18□□□□□ -1.42
RTEL1-TNFRSF6B-204ENST00000496281 HYDINQ4G0P3 5121 aa6.18□□□□□ -1.42
RTEL1-TNFRSF6B-204ENST00000496281 HERC1Q15751 4861 aa6.1□□□□□ -1.43
RTEL1-TNFRSF6B-204ENST00000496281 SYNE1Q8NF91 8797 aaKnown RBP6.08□□□□□ -1.44
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP19-2Q3LHN2 52 aa6.08□□□□□ -1.44
RTEL1-TNFRSF6B-204ENST00000496281 BIRC6Q9NR09 4857 aa6.08□□□□□ -1.44
RTEL1-TNFRSF6B-204ENST00000496281 PKHD1P08F94 4074 aa6.07□□□□□ -1.44
RTEL1-TNFRSF6B-204ENST00000496281 EPPK1P58107 5090 aaKnown RBP6.03□□□□□ -1.44
RTEL1-TNFRSF6B-204ENST00000496281 PKHD1L1Q86WI1 4243 aa6.02□□□□□ -1.45
RTEL1-TNFRSF6B-204ENST00000496281 LCE2BO14633 110 aa6□□□□□ -1.45
RTEL1-TNFRSF6B-204ENST00000496281 LPAP08519 4548 aa5.99□□□□□ -1.45
RTEL1-TNFRSF6B-204ENST00000496281 KMT2CQ8NEZ4 4911 aaKnown RBP5.98□□□□□ -1.45
RTEL1-TNFRSF6B-204ENST00000496281 SPRR2DP22532 72 aa5.97□□□□□ -1.45
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP4-7Q9BYR0 210 aa5.93□□□□□ -1.46
RTEL1-TNFRSF6B-204ENST00000496281 LCE3DQ9BYE3 92 aa5.91□□□□□ -1.46
RTEL1-TNFRSF6B-204ENST00000496281 MUC17Q685J3 4493 aa5.91□□□□□ -1.46
RTEL1-TNFRSF6B-204ENST00000496281 MT1LQ93083 61 aa5.9□□□□□ -1.46
RTEL1-TNFRSF6B-204ENST00000496281 LCE3EQ5T5B0 92 aa5.88□□□□□ -1.47
RTEL1-TNFRSF6B-204ENST00000496281 KRTAP19-3Q7Z4W3 81 aa5.88□□□□□ -1.47
RTEL1-TNFRSF6B-204ENST00000496281 ABCA13Q86UQ4 5058 aa5.87□□□□□ -1.47
RTEL1-TNFRSF6B-204ENST00000496281 MT1EP04732 61 aa5.82□□□□□ -1.48
RTEL1-TNFRSF6B-204ENST00000496281 TNXBP22105 4242 aa5.82□□□□□ -1.48
RTEL1-TNFRSF6B-204ENST00000496281 FLGP20930 4061 aaPredicted RBP5.76□□□□□ -1.49
RTEL1-TNFRSF6B-204ENST00000496281 UBR4Q5T4S7 5183 aa5.74□□□□□ -1.49
RTEL1-TNFRSF6B-204ENST00000496281 FSIP2Q5CZC0 6907 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms