RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 PRO1854Q9UHT4 67 aa2.21□□□□□ -2.06
VPS52-222ENST00000495981 TRAV7A0A075B6U4 112 aa2.2□□□□□ -2.06
VPS52-222ENST00000495981 A6NN06 94 aa2.2□□□□□ -2.06
VPS52-222ENST00000495981 H3BQ85 93 aa2.2□□□□□ -2.06
VPS52-222ENST00000495981 SPRR1BP22528 89 aa2.2□□□□□ -2.06
VPS52-222ENST00000495981 ATP5EP2Q5VTU8 51 aa2.2□□□□□ -2.06
VPS52-222ENST00000495981 SOSTDC1Q6X4U4 206 aa2.2□□□□□ -2.06
VPS52-222ENST00000495981 SSBP3-AS1Q7Z2R9 100 aa2.2□□□□□ -2.06
VPS52-222ENST00000495981 TRAV23DV6A0A075B6W5 121 aa2.19□□□□□ -2.06
VPS52-222ENST00000495981 A6NED7 52 aa2.19□□□□□ -2.06
VPS52-222ENST00000495981 C9orf92A6NGG3 77 aa2.19□□□□□ -2.06
VPS52-222ENST00000495981 PLNP26678 52 aa2.19□□□□□ -2.06
VPS52-222ENST00000495981 RPL37P61927 97 aaKnown RBP2.19□□□□□ -2.06
VPS52-222ENST00000495981 RBM3P98179 157 aaKnown RBP2.19□□□□□ -2.06
VPS52-222ENST00000495981 LEPROTO15243 131 aa2.18□□□□□ -2.06
VPS52-222ENST00000495981 KRTAP19-6Q3LI70 58 aa2.18□□□□□ -2.06
VPS52-222ENST00000495981 LINC01554Q52M75 96 aa2.18□□□□□ -2.06
VPS52-222ENST00000495981 C20orf197Q8N268 126 aa2.18□□□□□ -2.06
VPS52-222ENST00000495981 LIMD2Q9BT23 127 aa2.18□□□□□ -2.06
VPS52-222ENST00000495981 S100A7L2Q5SY68 101 aa2.17□□□□□ -2.06
VPS52-222ENST00000495981 A0A1B0GW54 56 aa2.16□□□□□ -2.06
VPS52-222ENST00000495981 COX6CP09669 75 aa2.16□□□□□ -2.06
VPS52-222ENST00000495981 ELOF1P60002 83 aaKnown RBP2.16□□□□□ -2.06
VPS52-222ENST00000495981 CYP4F30PQ9H0H9 118 aa2.16□□□□□ -2.06
VPS52-222ENST00000495981 KRTAP25-1Q3LHN0 102 aa2.15□□□□□ -2.07
VPS52-222ENST00000495981 SPINT4Q6UDR6 99 aa2.15□□□□□ -2.07
VPS52-222ENST00000495981 TTTY13Q9BZ97 58 aa2.15□□□□□ -2.07
VPS52-222ENST00000495981 IGLV5-48A0A075B6I7 105 aa2.14□□□□□ -2.07
VPS52-222ENST00000495981 A0A0G2JQZ4 141 aa2.14□□□□□ -2.07
VPS52-222ENST00000495981 hDV103S1A0JD37 113 aa2.14□□□□□ -2.07
VPS52-222ENST00000495981 F8WEM9 126 aa2.14□□□□□ -2.07
VPS52-222ENST00000495981 H7C2G1 150 aa2.14□□□□□ -2.07
VPS52-222ENST00000495981 MT2AP02795 61 aa2.14□□□□□ -2.07
VPS52-222ENST00000495981 MT1FP04733 61 aa2.14□□□□□ -2.07
VPS52-222ENST00000495981 COX6B2Q6YFQ2 88 aa2.14□□□□□ -2.07
VPS52-222ENST00000495981 R4GN34 69 aa2.14□□□□□ -2.07
VPS52-222ENST00000495981 A0A1B0GU33 70 aa2.13□□□□□ -2.07
VPS52-222ENST00000495981 LINC00308Q8TCZ7 52 aa2.13□□□□□ -2.07
VPS52-222ENST00000495981 CLEC2BQ92478 149 aa2.13□□□□□ -2.07
VPS52-222ENST00000495981 OBSCN-AS1Q96MR7 158 aa2.13□□□□□ -2.07
VPS52-222ENST00000495981 TRAV22A0A0B4J277 110 aa2.12□□□□□ -2.07
VPS52-222ENST00000495981 TRBV7-4A0A0J9YYF1 115 aa2.12□□□□□ -2.07
VPS52-222ENST00000495981 ZNF815PA8K554 130 aa2.12□□□□□ -2.07
VPS52-222ENST00000495981 KRTAP2-3P0C7H8 128 aa2.12□□□□□ -2.07
VPS52-222ENST00000495981 COX7BP24311 80 aa2.12□□□□□ -2.07
VPS52-222ENST00000495981 KRTAP12-2P59991 146 aa2.12□□□□□ -2.07
VPS52-222ENST00000495981 KRTAP2-4Q9BYR9 128 aa2.12□□□□□ -2.07
VPS52-222ENST00000495981 CDC42SE1Q9NRR8 79 aa2.12□□□□□ -2.07
VPS52-222ENST00000495981 Q5VV11 94 aa2.11□□□□□ -2.07
VPS52-222ENST00000495981 A0A087WVE0 104 aa2.1□□□□□ -2.07
VPS52-222ENST00000495981 LOC101927531A0A1B0GV80 90 aa2.1□□□□□ -2.07
VPS52-222ENST00000495981 KRTAP9-6A8MVA2 160 aa2.1□□□□□ -2.07
VPS52-222ENST00000495981 DNAL4O96015 105 aa2.1□□□□□ -2.07
VPS52-222ENST00000495981 LINC00846Q9NV44 126 aa2.1□□□□□ -2.07
VPS52-222ENST00000495981 HCG22E2RYF7 251 aa2.09□□□□□ -2.07
VPS52-222ENST00000495981 HRES1P13985 223 aa2.09□□□□□ -2.07
VPS52-222ENST00000495981 C1orf64Q8NEQ6 169 aa2.09□□□□□ -2.07
VPS52-222ENST00000495981 DEFB105AQ8NG35 78 aa2.09□□□□□ -2.07
VPS52-222ENST00000495981 TMEM254Q8TBM7 123 aa2.09□□□□□ -2.07
VPS52-222ENST00000495981 C20orf166-AS1Q96NR2 134 aa2.09□□□□□ -2.07
VPS52-222ENST00000495981 IGKV3D-7A0A0C4DH55 119 aa2.08□□□□□ -2.08
VPS52-222ENST00000495981 BAALC-AS2P0C853 105 aa2.08□□□□□ -2.08
VPS52-222ENST00000495981 SPRR5A0A1B0GTR4 108 aa2.07□□□□□ -2.08
VPS52-222ENST00000495981 IGFL1Q6UW32 110 aa2.07□□□□□ -2.08
VPS52-222ENST00000495981 SMIM11BQ8TCY0 68 aa2.07□□□□□ -2.08
VPS52-222ENST00000495981 SNURFQ9Y675 71 aa2.07□□□□□ -2.08
VPS52-222ENST00000495981 CHKB-CPT1BH3BT56 60 aa2.06□□□□□ -2.08
VPS52-222ENST00000495981 Q6ZQY7 126 aa2.06□□□□□ -2.08
VPS52-222ENST00000495981 MUSTN1Q8IVN3 82 aa2.06□□□□□ -2.08
VPS52-222ENST00000495981 SPTSSBQ8NFR3 76 aa2.06□□□□□ -2.08
VPS52-222ENST00000495981 JMJD7-PLA2G4BH0Y9G9 81 aa2.05□□□□□ -2.08
VPS52-222ENST00000495981 KRTAP5-9P26371 169 aa2.05□□□□□ -2.08
VPS52-222ENST00000495981 CASC2Q6XLA1 102 aa2.05□□□□□ -2.08
VPS52-222ENST00000495981 Q96NJ1 140 aa2.05□□□□□ -2.08
VPS52-222ENST00000495981 UBL5Q9BZL1 73 aa2.05□□□□□ -2.08
VPS52-222ENST00000495981 KRTAP10-10P60014 251 aa2.04□□□□□ -2.08
VPS52-222ENST00000495981 NREPQ16612 68 aa2.04□□□□□ -2.08
VPS52-222ENST00000495981 LINC00575Q6W349 94 aa2.04□□□□□ -2.08
VPS52-222ENST00000495981 H0YGX0 51 aa2.03□□□□□ -2.08
VPS52-222ENST00000495981 NDUFB1O75438 58 aa2.03□□□□□ -2.08
VPS52-222ENST00000495981 ROMO1P60602 79 aa2.03□□□□□ -2.08
VPS52-222ENST00000495981 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.03□□□□□ -2.08
VPS52-222ENST00000495981 ZCCHC13Q8WW36 166 aaKnown RBP2.03□□□□□ -2.08
VPS52-222ENST00000495981 KRTAP2-1Q9BYU5 128 aa2.03□□□□□ -2.08
VPS52-222ENST00000495981 A0A1W2PNM2 257 aa2.02□□□□□ -2.09
VPS52-222ENST00000495981 PDE6GP18545 87 aa2.02□□□□□ -2.09
VPS52-222ENST00000495981 LOC110117498A0A087WWA1 95 aa2.01□□□□□ -2.09
VPS52-222ENST00000495981 C14orf132Q9NPU4 83 aa2.01□□□□□ -2.09
VPS52-222ENST00000495981 AHNAK2Q8IVF2 5795 aa2□□□□□ -2.09
VPS52-222ENST00000495981 A0A087WSZ3 146 aa2□□□□□ -2.09
VPS52-222ENST00000495981 LINC01558Q9Y6Z2 57 aa2□□□□□ -2.09
VPS52-222ENST00000495981 PRR15LQ9BU68 103 aa1.99□□□□□ -2.09
VPS52-222ENST00000495981 DSTQ03001 7570 aaKnown RBP1.98□□□□□ -2.09
VPS52-222ENST00000495981 H3BPC8 53 aa1.98□□□□□ -2.09
VPS52-222ENST00000495981 KRTAP5-1Q6L8H4 278 aa1.98□□□□□ -2.09
VPS52-222ENST00000495981 ORMDL1Q9P0S3 153 aa1.98□□□□□ -2.09
VPS52-222ENST00000495981 Q6ZQT0 140 aa1.97□□□□□ -2.09
VPS52-222ENST00000495981 LINC00208Q96KT6 92 aa1.97□□□□□ -2.09
VPS52-222ENST00000495981 HMCN1Q96RW7 5635 aa1.97□□□□□ -2.09
VPS52-222ENST00000495981 IGKV4-1P06312 121 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms