RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 AKAP9Q99996 3911 aa6.99□□□□□ -1.29
BRAT1-206ENST00000493232 ALMS1Q8TCU4 4167 aa6.99□□□□□ -1.29
BRAT1-206ENST00000493232 LCE3AQ5TA76 89 aa6.95□□□□□ -1.3
BRAT1-206ENST00000493232 DNAH9Q9NYC9 4486 aa6.95□□□□□ -1.3
BRAT1-206ENST00000493232 LORP23490 312 aaPredicted RBP6.82□□□□□ -1.32
BRAT1-206ENST00000493232 CSMD3Q7Z407 3707 aa6.81□□□□□ -1.32
BRAT1-206ENST00000493232 DNAH1Q9P2D7 4330 aa6.77□□□□□ -1.33
BRAT1-206ENST00000493232 KRTAP8-1Q8IUC2 63 aa6.77□□□□□ -1.33
BRAT1-206ENST00000493232 PLECQ15149 4684 aaKnown RBP6.77□□□□□ -1.33
BRAT1-206ENST00000493232 DNHD1Q96M86 4753 aa6.74□□□□□ -1.33
BRAT1-206ENST00000493232 DNAH5Q8TE73 4624 aa6.73□□□□□ -1.33
BRAT1-206ENST00000493232 VPS13DQ5THJ4 4388 aa6.67□□□□□ -1.34
BRAT1-206ENST00000493232 DNAH11Q96DT5 4516 aa6.65□□□□□ -1.34
BRAT1-206ENST00000493232 DNAH17Q9UFH2 4485 aa6.64□□□□□ -1.35
BRAT1-206ENST00000493232 DNAH10Q8IVF4 4471 aa6.62□□□□□ -1.35
BRAT1-206ENST00000493232 KRTAP10-5P60370 271 aa6.61□□□□□ -1.35
BRAT1-206ENST00000493232 MT1HP80294 61 aa6.55□□□□□ -1.36
BRAT1-206ENST00000493232 KRTAP4-1Q9BYQ7 146 aa6.52□□□□□ -1.37
BRAT1-206ENST00000493232 STARD9Q9P2P6 4700 aa6.51□□□□□ -1.37
BRAT1-206ENST00000493232 MT2AP02795 61 aa6.47□□□□□ -1.37
BRAT1-206ENST00000493232 SPRR2GQ9BYE4 73 aa6.47□□□□□ -1.37
BRAT1-206ENST00000493232 DYNC1H1Q14204 4646 aaKnown RBP6.46□□□□□ -1.38
BRAT1-206ENST00000493232 DNAH2Q9P225 4427 aa6.46□□□□□ -1.38
BRAT1-206ENST00000493232 DNAH3Q8TD57 4116 aa6.45□□□□□ -1.38
BRAT1-206ENST00000493232 LRP1BQ9NZR2 4599 aa6.41□□□□□ -1.38
BRAT1-206ENST00000493232 DNAH8Q96JB1 4490 aa6.38□□□□□ -1.39
BRAT1-206ENST00000493232 DYNC2H1Q8NCM8 4307 aaKnown RBP6.37□□□□□ -1.39
BRAT1-206ENST00000493232 FAT1Q14517 4588 aa6.37□□□□□ -1.39
BRAT1-206ENST00000493232 ANK2Q01484 3957 aa6.34□□□□□ -1.4
BRAT1-206ENST00000493232 PRKDCP78527 4128 aaKnown RBP6.33□□□□□ -1.4
BRAT1-206ENST00000493232 RYR1P21817 5038 aa6.33□□□□□ -1.4
BRAT1-206ENST00000493232 SACSQ9NZJ4 4579 aa6.32□□□□□ -1.4
BRAT1-206ENST00000493232 MT1FP04733 61 aa6.3□□□□□ -1.4
BRAT1-206ENST00000493232 FAT2Q9NYQ8 4349 aa6.28□□□□□ -1.4
BRAT1-206ENST00000493232 KRTAP10-7P60409 375 aaPredicted RBP6.27□□□□□ -1.41
BRAT1-206ENST00000493232 KRTAP19-4Q3LI73 84 aa6.25□□□□□ -1.41
BRAT1-206ENST00000493232 SPRR2FQ96RM1 72 aa6.25□□□□□ -1.41
BRAT1-206ENST00000493232 KMT2AQ03164 3969 aa6.24□□□□□ -1.41
BRAT1-206ENST00000493232 KRTAP19-5Q3LI72 72 aa6.23□□□□□ -1.41
BRAT1-206ENST00000493232 LCE3CQ5T5A8 94 aa6.17□□□□□ -1.42
BRAT1-206ENST00000493232 CMYA5Q8N3K9 4069 aa6.16□□□□□ -1.42
BRAT1-206ENST00000493232 VPS13BQ7Z7G8 4022 aa6.14□□□□□ -1.43
BRAT1-206ENST00000493232 KIAA1109Q2LD37 5005 aa6.11□□□□□ -1.43
BRAT1-206ENST00000493232 DNAH6Q9C0G6 4158 aa6.1□□□□□ -1.43
BRAT1-206ENST00000493232 APOBP04114 4563 aaKnown RBP6.1□□□□□ -1.43
BRAT1-206ENST00000493232 RYR3Q15413 4870 aa6.08□□□□□ -1.44
BRAT1-206ENST00000493232 LYSTQ99698 3801 aa6.04□□□□□ -1.44
BRAT1-206ENST00000493232 KRTAP17-1Q9BYP8 105 aa6.04□□□□□ -1.44
BRAT1-206ENST00000493232 HECTD4Q9Y4D8 3996 aa6.01□□□□□ -1.45
BRAT1-206ENST00000493232 KRTAP19-8Q3LI54 63 aa6□□□□□ -1.45
BRAT1-206ENST00000493232 FRAS1Q86XX4 4008 aa5.99□□□□□ -1.45
BRAT1-206ENST00000493232 DNAH7Q8WXX0 4024 aa5.99□□□□□ -1.45
BRAT1-206ENST00000493232 RYR2Q92736 4967 aa5.96□□□□□ -1.45
BRAT1-206ENST00000493232 MYCBP2O75592 4640 aa5.94□□□□□ -1.46
BRAT1-206ENST00000493232 KRTAP19-1Q8IUB9 90 aa5.9□□□□□ -1.47
BRAT1-206ENST00000493232 BIRC6Q9NR09 4857 aa5.89□□□□□ -1.47
BRAT1-206ENST00000493232 LRP1Q07954 4544 aaKnown RBP5.88□□□□□ -1.47
BRAT1-206ENST00000493232 SPRR2EP22531 72 aa5.88□□□□□ -1.47
BRAT1-206ENST00000493232 SPRR2BP35325 72 aa5.88□□□□□ -1.47
BRAT1-206ENST00000493232 SPRR2AP35326 72 aa5.88□□□□□ -1.47
BRAT1-206ENST00000493232 FAT3Q8TDW7 4589 aa5.85□□□□□ -1.47
BRAT1-206ENST00000493232 HERC2O95714 4834 aa5.82□□□□□ -1.48
BRAT1-206ENST00000493232 MT1XP80297 61 aa5.79□□□□□ -1.48
BRAT1-206ENST00000493232 HYDINQ4G0P3 5121 aa5.78□□□□□ -1.48
BRAT1-206ENST00000493232 HERC1Q15751 4861 aa5.74□□□□□ -1.49
BRAT1-206ENST00000493232 MT1BP07438 61 aa5.72□□□□□ -1.49
BRAT1-206ENST00000493232 SPRR2DP22532 72 aa5.7□□□□□ -1.5
BRAT1-206ENST00000493232 LCE3BQ5TA77 95 aa5.7□□□□□ -1.5
BRAT1-206ENST00000493232 LCE2BO14633 110 aa5.68□□□□□ -1.5
BRAT1-206ENST00000493232 KRTAP9-8Q9BYQ0 159 aa5.66□□□□□ -1.5
BRAT1-206ENST00000493232 HSPG2P98160 4391 aa5.65□□□□□ -1.5
BRAT1-206ENST00000493232 MT1GP13640 62 aa5.65□□□□□ -1.5
BRAT1-206ENST00000493232 KRTAP12-4P60329 112 aa5.65□□□□□ -1.5
BRAT1-206ENST00000493232 PKHD1P08F94 4074 aa5.65□□□□□ -1.51
BRAT1-206ENST00000493232 PKD1P98161 4303 aa5.61□□□□□ -1.51
BRAT1-206ENST00000493232 PCLOQ9Y6V0 5065 aa5.61□□□□□ -1.51
BRAT1-206ENST00000493232 LCE2CQ5TA81 110 aa5.6□□□□□ -1.51
BRAT1-206ENST00000493232 LRP2P98164 4655 aa5.59□□□□□ -1.52
BRAT1-206ENST00000493232 KRTAP9-3Q9BYQ3 159 aa5.57□□□□□ -1.52
BRAT1-206ENST00000493232 PKHD1L1Q86WI1 4243 aa5.55□□□□□ -1.52
BRAT1-206ENST00000493232 KRTAP4-8A0A0G2JLE6 195 aa5.51□□□□□ -1.53
BRAT1-206ENST00000493232 KRTAP4-8Q9BYQ9 185 aa5.51□□□□□ -1.53
BRAT1-206ENST00000493232 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
BRAT1-206ENST00000493232 LCE3DQ9BYE3 92 aa5.45□□□□□ -1.54
BRAT1-206ENST00000493232 KMT2CQ8NEZ4 4911 aaKnown RBP5.42□□□□□ -1.54
BRAT1-206ENST00000493232 LPAP08519 4548 aa5.4□□□□□ -1.55
BRAT1-206ENST00000493232 TNXBP22105 4242 aa5.4□□□□□ -1.55
BRAT1-206ENST00000493232 KRTAP19-3Q7Z4W3 81 aa5.39□□□□□ -1.55
BRAT1-206ENST00000493232 LCE3EQ5T5B0 92 aa5.38□□□□□ -1.55
BRAT1-206ENST00000493232 KRTAP19-2Q3LHN2 52 aa5.36□□□□□ -1.55
BRAT1-206ENST00000493232 MT1LQ93083 61 aa5.31□□□□□ -1.56
BRAT1-206ENST00000493232 MT1EP04732 61 aa5.26□□□□□ -1.57
BRAT1-206ENST00000493232 EPPK1P58107 5090 aaKnown RBP5.24□□□□□ -1.57
BRAT1-206ENST00000493232 ABCA13Q86UQ4 5058 aa5.24□□□□□ -1.57
BRAT1-206ENST00000493232 MUC17Q685J3 4493 aa5.23□□□□□ -1.57
BRAT1-206ENST00000493232 LCE2DQ5TA82 110 aaPredicted RBP5.22□□□□□ -1.57
BRAT1-206ENST00000493232 FLGP20930 4061 aaPredicted RBP5.18□□□□□ -1.58
BRAT1-206ENST00000493232 KRTAP4-7Q9BYR0 210 aa5.16□□□□□ -1.58
BRAT1-206ENST00000493232 KRTAP9-2Q9BYQ4 174 aa5.16□□□□□ -1.58
BRAT1-206ENST00000493232 MT3P25713 68 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms