RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 KRTAP12-3P60328 96 aa5.91□□□□□ -1.46
TRIM11-204ENST00000493030 LCE3AQ5TA76 89 aa5.85□□□□□ -1.47
TRIM11-204ENST00000493030 LORP23490 312 aaPredicted RBP5.82□□□□□ -1.48
TRIM11-204ENST00000493030 PLECQ15149 4684 aaKnown RBP5.82□□□□□ -1.48
TRIM11-204ENST00000493030 DNAH1Q9P2D7 4330 aa5.78□□□□□ -1.48
TRIM11-204ENST00000493030 VPS13DQ5THJ4 4388 aa5.78□□□□□ -1.48
TRIM11-204ENST00000493030 DNHD1Q96M86 4753 aa5.78□□□□□ -1.48
TRIM11-204ENST00000493030 DNAH5Q8TE73 4624 aa5.75□□□□□ -1.49
TRIM11-204ENST00000493030 CSMD3Q7Z407 3707 aa5.75□□□□□ -1.49
TRIM11-204ENST00000493030 KRTAP23-1A1A580 65 aa5.73□□□□□ -1.49
TRIM11-204ENST00000493030 DNAH17Q9UFH2 4485 aa5.7□□□□□ -1.5
TRIM11-204ENST00000493030 ANK2Q01484 3957 aa5.7□□□□□ -1.5
TRIM11-204ENST00000493030 DNAH10Q8IVF4 4471 aa5.7□□□□□ -1.5
TRIM11-204ENST00000493030 DNAH11Q96DT5 4516 aa5.69□□□□□ -1.5
TRIM11-204ENST00000493030 KRTAP8-1Q8IUC2 63 aa5.68□□□□□ -1.5
TRIM11-204ENST00000493030 STARD9Q9P2P6 4700 aa5.65□□□□□ -1.51
TRIM11-204ENST00000493030 KRTAP10-5P60370 271 aa5.61□□□□□ -1.51
TRIM11-204ENST00000493030 PRKDCP78527 4128 aaKnown RBP5.59□□□□□ -1.52
TRIM11-204ENST00000493030 DYNC1H1Q14204 4646 aaKnown RBP5.59□□□□□ -1.52
TRIM11-204ENST00000493030 DNAH3Q8TD57 4116 aa5.58□□□□□ -1.52
TRIM11-204ENST00000493030 KRTAP4-1Q9BYQ7 146 aa5.54□□□□□ -1.52
TRIM11-204ENST00000493030 LRP1BQ9NZR2 4599 aa5.53□□□□□ -1.52
TRIM11-204ENST00000493030 DYNC2H1Q8NCM8 4307 aaKnown RBP5.52□□□□□ -1.53
TRIM11-204ENST00000493030 DNAH2Q9P225 4427 aa5.52□□□□□ -1.53
TRIM11-204ENST00000493030 MT1HP80294 61 aa5.5□□□□□ -1.53
TRIM11-204ENST00000493030 CMYA5Q8N3K9 4069 aa5.46□□□□□ -1.54
TRIM11-204ENST00000493030 FAT2Q9NYQ8 4349 aa5.45□□□□□ -1.54
TRIM11-204ENST00000493030 FAT1Q14517 4588 aa5.42□□□□□ -1.54
TRIM11-204ENST00000493030 DNAH6Q9C0G6 4158 aa5.42□□□□□ -1.54
TRIM11-204ENST00000493030 MT2AP02795 61 aa5.42□□□□□ -1.54
TRIM11-204ENST00000493030 SACSQ9NZJ4 4579 aa5.41□□□□□ -1.54
TRIM11-204ENST00000493030 KMT2AQ03164 3969 aa5.37□□□□□ -1.55
TRIM11-204ENST00000493030 DNAH8Q96JB1 4490 aa5.35□□□□□ -1.55
TRIM11-204ENST00000493030 RYR1P21817 5038 aa5.35□□□□□ -1.55
TRIM11-204ENST00000493030 SPRR2GQ9BYE4 73 aa5.33□□□□□ -1.56
TRIM11-204ENST00000493030 MT1FP04733 61 aa5.31□□□□□ -1.56
TRIM11-204ENST00000493030 SPRR2FQ96RM1 72 aa5.3□□□□□ -1.56
TRIM11-204ENST00000493030 KIAA1109Q2LD37 5005 aa5.25□□□□□ -1.57
TRIM11-204ENST00000493030 RYR2Q92736 4967 aa5.25□□□□□ -1.57
TRIM11-204ENST00000493030 KRTAP19-5Q3LI72 72 aa5.25□□□□□ -1.57
TRIM11-204ENST00000493030 DNAH7Q8WXX0 4024 aa5.24□□□□□ -1.57
TRIM11-204ENST00000493030 KRTAP10-7P60409 375 aaPredicted RBP5.23□□□□□ -1.57
TRIM11-204ENST00000493030 VPS13BQ7Z7G8 4022 aa5.22□□□□□ -1.57
TRIM11-204ENST00000493030 RYR3Q15413 4870 aa5.22□□□□□ -1.57
TRIM11-204ENST00000493030 KRTAP17-1Q9BYP8 105 aa5.21□□□□□ -1.57
TRIM11-204ENST00000493030 APOBP04114 4563 aaKnown RBP5.18□□□□□ -1.58
TRIM11-204ENST00000493030 HECTD4Q9Y4D8 3996 aa5.16□□□□□ -1.58
TRIM11-204ENST00000493030 LYSTQ99698 3801 aa5.14□□□□□ -1.59
TRIM11-204ENST00000493030 LCE3CQ5T5A8 94 aa5.13□□□□□ -1.59
TRIM11-204ENST00000493030 HYDINQ4G0P3 5121 aa5.1□□□□□ -1.59
TRIM11-204ENST00000493030 BIRC6Q9NR09 4857 aa5.03□□□□□ -1.6
TRIM11-204ENST00000493030 LRP1Q07954 4544 aaKnown RBP5.02□□□□□ -1.61
TRIM11-204ENST00000493030 MYCBP2O75592 4640 aa5.01□□□□□ -1.61
TRIM11-204ENST00000493030 FAT3Q8TDW7 4589 aa5□□□□□ -1.61
TRIM11-204ENST00000493030 FRAS1Q86XX4 4008 aa5□□□□□ -1.61
TRIM11-204ENST00000493030 HSPG2P98160 4391 aa4.98□□□□□ -1.61
TRIM11-204ENST00000493030 HERC2O95714 4834 aa4.97□□□□□ -1.61
TRIM11-204ENST00000493030 SPRR2EP22531 72 aa4.96□□□□□ -1.62
TRIM11-204ENST00000493030 SPRR2BP35325 72 aa4.96□□□□□ -1.62
TRIM11-204ENST00000493030 SPRR2AP35326 72 aa4.96□□□□□ -1.62
TRIM11-204ENST00000493030 PKD1P98161 4303 aa4.94□□□□□ -1.62
TRIM11-204ENST00000493030 KRTAP19-1Q8IUB9 90 aa4.93□□□□□ -1.62
TRIM11-204ENST00000493030 PKHD1P08F94 4074 aa4.91□□□□□ -1.62
TRIM11-204ENST00000493030 KRTAP19-8Q3LI54 63 aa4.91□□□□□ -1.62
TRIM11-204ENST00000493030 KRTAP19-4Q3LI73 84 aa4.89□□□□□ -1.63
TRIM11-204ENST00000493030 LCE3BQ5TA77 95 aa4.87□□□□□ -1.63
TRIM11-204ENST00000493030 KMT2CQ8NEZ4 4911 aaKnown RBP4.84□□□□□ -1.63
TRIM11-204ENST00000493030 MT1XP80297 61 aa4.84□□□□□ -1.63
TRIM11-204ENST00000493030 MT1GP13640 62 aa4.81□□□□□ -1.64
TRIM11-204ENST00000493030 SPRR2DP22532 72 aa4.79□□□□□ -1.64
TRIM11-204ENST00000493030 HERC1Q15751 4861 aa4.78□□□□□ -1.64
TRIM11-204ENST00000493030 MT1BP07438 61 aa4.78□□□□□ -1.64
TRIM11-204ENST00000493030 LCE2BO14633 110 aa4.76□□□□□ -1.65
TRIM11-204ENST00000493030 KRTAP4-8A0A0G2JLE6 195 aa4.75□□□□□ -1.65
TRIM11-204ENST00000493030 KRTAP4-8Q9BYQ9 185 aa4.75□□□□□ -1.65
TRIM11-204ENST00000493030 LCE2CQ5TA81 110 aa4.74□□□□□ -1.65
TRIM11-204ENST00000493030 KRTAP9-8Q9BYQ0 159 aa4.74□□□□□ -1.65
TRIM11-204ENST00000493030 LRP2P98164 4655 aa4.74□□□□□ -1.65
TRIM11-204ENST00000493030 PKHD1L1Q86WI1 4243 aa4.72□□□□□ -1.65
TRIM11-204ENST00000493030 KRTAP12-4P60329 112 aa4.69□□□□□ -1.66
TRIM11-204ENST00000493030 TNXBP22105 4242 aa4.69□□□□□ -1.66
TRIM11-204ENST00000493030 PCLOQ9Y6V0 5065 aa4.68□□□□□ -1.66
TRIM11-204ENST00000493030 EPPK1P58107 5090 aaKnown RBP4.68□□□□□ -1.66
TRIM11-204ENST00000493030 KRTAP9-3Q9BYQ3 159 aa4.64□□□□□ -1.67
TRIM11-204ENST00000493030 ABCA13Q86UQ4 5058 aa4.64□□□□□ -1.67
TRIM11-204ENST00000493030 KRTAP19-2Q3LHN2 52 aa4.63□□□□□ -1.67
TRIM11-204ENST00000493030 LPAP08519 4548 aa4.59□□□□□ -1.68
TRIM11-204ENST00000493030 SPRR5A0A1B0GTR4 108 aa4.55□□□□□ -1.68
TRIM11-204ENST00000493030 LCE3DQ9BYE3 92 aa4.54□□□□□ -1.68
TRIM11-204ENST00000493030 KRTAP19-3Q7Z4W3 81 aa4.48□□□□□ -1.69
TRIM11-204ENST00000493030 KRTAP4-7Q9BYR0 210 aa4.48□□□□□ -1.69
TRIM11-204ENST00000493030 MUC17Q685J3 4493 aa4.46□□□□□ -1.69
TRIM11-204ENST00000493030 LCE3EQ5T5B0 92 aa4.45□□□□□ -1.7
TRIM11-204ENST00000493030 FLGP20930 4061 aaPredicted RBP4.44□□□□□ -1.7
TRIM11-204ENST00000493030 MT1LQ93083 61 aa4.41□□□□□ -1.7
TRIM11-204ENST00000493030 LCE2DQ5TA82 110 aaPredicted RBP4.4□□□□□ -1.71
TRIM11-204ENST00000493030 KRTAP9-2Q9BYQ4 174 aa4.37□□□□□ -1.71
TRIM11-204ENST00000493030 MT1EP04732 61 aa4.37□□□□□ -1.71
TRIM11-204ENST00000493030 RNF213Q63HN8 5207 aa4.34□□□□□ -1.71
TRIM11-204ENST00000493030 MT4P47944 62 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms