RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 TRBV7-7A0A0K0K1E9 115 aa2.47□□□□□ -2.01
CLIP4-211ENST00000491701 LCE3CQ5T5A8 94 aa2.47□□□□□ -2.01
CLIP4-211ENST00000491701 Q8N9L7 120 aa2.47□□□□□ -2.01
CLIP4-211ENST00000491701 R4GN34 69 aa2.47□□□□□ -2.01
CLIP4-211ENST00000491701 CCDC179H3BU77 68 aa2.46□□□□□ -2.02
CLIP4-211ENST00000491701 MT-ATP8P03928 68 aa2.46□□□□□ -2.02
CLIP4-211ENST00000491701 TMEM258P61165 79 aa2.46□□□□□ -2.02
CLIP4-211ENST00000491701 Q6JHZ5 121 aa2.45□□□□□ -2.02
CLIP4-211ENST00000491701 PDE6GP18545 87 aa2.44□□□□□ -2.02
CLIP4-211ENST00000491701 ROMO1P60602 79 aa2.44□□□□□ -2.02
CLIP4-211ENST00000491701 ASB16-AS1Q495Z4 193 aa2.44□□□□□ -2.02
CLIP4-211ENST00000491701 A0A087WSZ3 146 aa2.43□□□□□ -2.02
CLIP4-211ENST00000491701 hDV103S1A0JD37 113 aa2.43□□□□□ -2.02
CLIP4-211ENST00000491701 SNCGO76070 127 aa2.43□□□□□ -2.02
CLIP4-211ENST00000491701 DSCR8Q96T75 97 aa2.43□□□□□ -2.02
CLIP4-211ENST00000491701 LPAP08519 4548 aa2.43□□□□□ -2.02
CLIP4-211ENST00000491701 IGKV3D-7A0A0C4DH55 119 aa2.42□□□□□ -2.02
CLIP4-211ENST00000491701 IGKV4-1P06312 121 aa2.42□□□□□ -2.02
CLIP4-211ENST00000491701 ACYP1P07311 99 aa2.42□□□□□ -2.02
CLIP4-211ENST00000491701 MUC17Q685J3 4493 aa2.42□□□□□ -2.02
CLIP4-211ENST00000491701 LINC00643Q86TS7 51 aa2.42□□□□□ -2.02
CLIP4-211ENST00000491701 C20orf166-AS1Q96NR2 134 aa2.42□□□□□ -2.02
CLIP4-211ENST00000491701 C9orf153Q5TBE3 101 aa2.41□□□□□ -2.02
CLIP4-211ENST00000491701 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
CLIP4-211ENST00000491701 A0A087WVE0 104 aa2.4□□□□□ -2.03
CLIP4-211ENST00000491701 A6NN06 94 aa2.4□□□□□ -2.03
CLIP4-211ENST00000491701 HRES1P13985 223 aa2.4□□□□□ -2.03
CLIP4-211ENST00000491701 LINC00304Q8N9R0 145 aa2.4□□□□□ -2.03
CLIP4-211ENST00000491701 F8WEM9 126 aa2.39□□□□□ -2.03
CLIP4-211ENST00000491701 K7EQZ3 153 aa2.39□□□□□ -2.03
CLIP4-211ENST00000491701 SPINK1P00995 79 aa2.39□□□□□ -2.03
CLIP4-211ENST00000491701 RPS29P62273 56 aaKnown RBP2.39□□□□□ -2.03
CLIP4-211ENST00000491701 NREPQ16612 68 aa2.39□□□□□ -2.03
CLIP4-211ENST00000491701 MMP24-AS1A0A0U1RRL7 71 aa2.38□□□□□ -2.03
CLIP4-211ENST00000491701 KRTAP13-3Q3SY46 172 aa2.38□□□□□ -2.03
CLIP4-211ENST00000491701 ATP11AUNQ6ZP68 121 aa2.38□□□□□ -2.03
CLIP4-211ENST00000491701 MUC2Q02817 5179 aa2.37□□□□□ -2.03
CLIP4-211ENST00000491701 SPAG11AQ6PDA7 123 aa2.37□□□□□ -2.03
CLIP4-211ENST00000491701 SERP1Q9Y6X1 66 aa2.37□□□□□ -2.03
CLIP4-211ENST00000491701 TMEM254Q8TBM7 123 aa2.36□□□□□ -2.03
CLIP4-211ENST00000491701 UBL5Q9BZL1 73 aa2.36□□□□□ -2.03
CLIP4-211ENST00000491701 PRO2289Q9P1D8 64 aa2.36□□□□□ -2.03
CLIP4-211ENST00000491701 ATP5EP2Q5VTU8 51 aa2.34□□□□□ -2.04
CLIP4-211ENST00000491701 CASC2Q6XLA1 102 aa2.34□□□□□ -2.04
CLIP4-211ENST00000491701 KRTAP4-1Q9BYQ7 146 aa2.34□□□□□ -2.04
CLIP4-211ENST00000491701 FAT4Q6V0I7 4981 aa2.33□□□□□ -2.04
CLIP4-211ENST00000491701 CYSTM1Q9H1C7 97 aa2.33□□□□□ -2.04
CLIP4-211ENST00000491701 KRTAP19-2Q3LHN2 52 aa2.32□□□□□ -2.04
CLIP4-211ENST00000491701 FP248Q71RG6 208 aaPredicted RBP2.32□□□□□ -2.04
CLIP4-211ENST00000491701 WFDC13Q8IUB5 93 aa2.32□□□□□ -2.04
CLIP4-211ENST00000491701 ZCCHC13Q8WW36 166 aaKnown RBP2.32□□□□□ -2.04
CLIP4-211ENST00000491701 A8MU10 97 aa2.31□□□□□ -2.04
CLIP4-211ENST00000491701 HCG22E2RYF7 251 aa2.31□□□□□ -2.04
CLIP4-211ENST00000491701 LIMD2Q9BT23 127 aa2.31□□□□□ -2.04
CLIP4-211ENST00000491701 C9orf92A6NGG3 77 aa2.3□□□□□ -2.04
CLIP4-211ENST00000491701 P0C880 135 aa2.3□□□□□ -2.04
CLIP4-211ENST00000491701 MRPL34Q9BQ48 92 aaKnown RBP2.3□□□□□ -2.04
CLIP4-211ENST00000491701 MIR22HGQ0VDD5 57 aa2.29□□□□□ -2.04
CLIP4-211ENST00000491701 TPRXLQ17RH7 258 aa2.27□□□□□ -2.05
CLIP4-211ENST00000491701 NDUFB1O75438 58 aa2.26□□□□□ -2.05
CLIP4-211ENST00000491701 COX7CP15954 63 aa2.26□□□□□ -2.05
CLIP4-211ENST00000491701 RPL37P61927 97 aaKnown RBP2.26□□□□□ -2.05
CLIP4-211ENST00000491701 KLKP1Q107X0 134 aa2.26□□□□□ -2.05
CLIP4-211ENST00000491701 LCE3AQ5TA76 89 aa2.26□□□□□ -2.05
CLIP4-211ENST00000491701 SERP2Q8N6R1 65 aa2.26□□□□□ -2.05
CLIP4-211ENST00000491701 LCE3EQ5T5B0 92 aa2.25□□□□□ -2.05
CLIP4-211ENST00000491701 FLGP20930 4061 aaPredicted RBP2.25□□□□□ -2.05
CLIP4-211ENST00000491701 ATOX1O00244 68 aa2.25□□□□□ -2.05
CLIP4-211ENST00000491701 KRTAP12-2P59991 146 aa2.24□□□□□ -2.05
CLIP4-211ENST00000491701 Q1T7F1 81 aa2.24□□□□□ -2.05
CLIP4-211ENST00000491701 CYP4F30PQ9H0H9 118 aa2.24□□□□□ -2.05
CLIP4-211ENST00000491701 H7BZZ5 65 aa2.23□□□□□ -2.05
CLIP4-211ENST00000491701 ATP5EP56381 51 aaPredicted RBP2.23□□□□□ -2.05
CLIP4-211ENST00000491701 PCOTHQ58A44 107 aa2.23□□□□□ -2.05
CLIP4-211ENST00000491701 H0Y9P7 68 aa2.22□□□□□ -2.05
CLIP4-211ENST00000491701 TP53AIP1Q9HCN2 124 aa2.22□□□□□ -2.05
CLIP4-211ENST00000491701 SNURFQ9Y675 71 aa2.22□□□□□ -2.05
CLIP4-211ENST00000491701 C20orf197Q8N268 126 aa2.21□□□□□ -2.06
CLIP4-211ENST00000491701 LINC00208Q96KT6 92 aa2.21□□□□□ -2.06
CLIP4-211ENST00000491701 TRAV22A0A0B4J277 110 aa2.2□□□□□ -2.06
CLIP4-211ENST00000491701 SPINK7P58062 85 aa2.2□□□□□ -2.06
CLIP4-211ENST00000491701 FSIP2Q5CZC0 6907 aa2.2□□□□□ -2.06
CLIP4-211ENST00000491701 CSAG1Q6PB30 78 aa2.17□□□□□ -2.06
CLIP4-211ENST00000491701 SPTSSBQ8NFR3 76 aa2.17□□□□□ -2.06
CLIP4-211ENST00000491701 LOC101927531A0A1B0GV80 90 aa2.16□□□□□ -2.06
CLIP4-211ENST00000491701 CRCT1Q9UGL9 99 aa2.16□□□□□ -2.06
CLIP4-211ENST00000491701 COX6B2Q6YFQ2 88 aa2.15□□□□□ -2.07
CLIP4-211ENST00000491701 DMAC1Q96GE9 116 aa2.14□□□□□ -2.07
CLIP4-211ENST00000491701 CDC42SE1Q9NRR8 79 aa2.12□□□□□ -2.07
CLIP4-211ENST00000491701 NDUFC1O43677 76 aa2.11□□□□□ -2.07
CLIP4-211ENST00000491701 MT1HP80294 61 aa2.1□□□□□ -2.07
CLIP4-211ENST00000491701 KRTAP5-5Q701N2 237 aaPredicted RBP2.1□□□□□ -2.07
CLIP4-211ENST00000491701 COA5Q86WW8 74 aa2.1□□□□□ -2.07
CLIP4-211ENST00000491701 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
CLIP4-211ENST00000491701 H1FX-AS1Q4G0G2 97 aa2.08□□□□□ -2.08
CLIP4-211ENST00000491701 M0R2T5 61 aa2.07□□□□□ -2.08
CLIP4-211ENST00000491701 SPRR5A0A1B0GTR4 108 aa2.06□□□□□ -2.08
CLIP4-211ENST00000491701 INE1O15225 51 aa2.05□□□□□ -2.08
CLIP4-211ENST00000491701 ACYP2P14621 99 aa2.05□□□□□ -2.08
CLIP4-211ENST00000491701 SSPOA2VEC9 5147 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms